RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 CIZ1Q9ULV3 898 aaPredicted RBP17.51■□□□□ 0.39
RPRD1A-208ENST00000589050 Q9Y3F1 56 aa17.51■□□□□ 0.39
RPRD1A-208ENST00000589050 SYNRGQ9UMZ2 1314 aa17.5■□□□□ 0.39
RPRD1A-208ENST00000589050 TBX3O15119 743 aa17.5■□□□□ 0.39
RPRD1A-208ENST00000589050 BAG4O95429 457 aaKnown RBP17.5■□□□□ 0.39
RPRD1A-208ENST00000589050 PGK1P00558 417 aa17.5■□□□□ 0.39
RPRD1A-208ENST00000589050 LAMC2Q13753 1193 aa17.5■□□□□ 0.39
RPRD1A-208ENST00000589050 LRCH2Q5VUJ6 765 aa17.5■□□□□ 0.39
RPRD1A-208ENST00000589050 SLC5A5Q92911 643 aa17.5■□□□□ 0.39
RPRD1A-208ENST00000589050 FAM20AQ96MK3 541 aa17.5■□□□□ 0.39
RPRD1A-208ENST00000589050 TMEM106CQ9BVX2 250 aa17.5■□□□□ 0.39
RPRD1A-208ENST00000589050 TMEM60Q9H2L4 133 aa17.5■□□□□ 0.39
RPRD1A-208ENST00000589050 SPC25Q9HBM1 224 aa17.5■□□□□ 0.39
RPRD1A-208ENST00000589050 TBC1D22BQ9NU19 505 aa17.5■□□□□ 0.39
RPRD1A-208ENST00000589050 NFASCO94856 1347 aa17.49■□□□□ 0.39
RPRD1A-208ENST00000589050 DDX39AO00148 427 aaKnown RBP17.49■□□□□ 0.39
RPRD1A-208ENST00000589050 GAS7O60861 476 aa17.49■□□□□ 0.39
RPRD1A-208ENST00000589050 FARP2O94887 1054 aaPredicted RBP17.49■□□□□ 0.39
RPRD1A-208ENST00000589050 GJB1P08034 283 aa17.49■□□□□ 0.39
RPRD1A-208ENST00000589050 C6orf222P0C671 652 aaPredicted RBP17.49■□□□□ 0.39
RPRD1A-208ENST00000589050 GJA9P57773 515 aa17.49■□□□□ 0.39
RPRD1A-208ENST00000589050 SP4Q02446 784 aa17.49■□□□□ 0.39
RPRD1A-208ENST00000589050 METTL7BQ6UX53 244 aa17.49■□□□□ 0.39
RPRD1A-208ENST00000589050 SLFN12Q8IYM2 578 aa17.49■□□□□ 0.39
RPRD1A-208ENST00000589050 U2AF1L4Q8WU68 220 aaKnown RBP17.49■□□□□ 0.39
RPRD1A-208ENST00000589050 HAS1Q92839 578 aa17.49■□□□□ 0.39
RPRD1A-208ENST00000589050 EMID1Q96A84 441 aaPredicted RBP17.49■□□□□ 0.39
RPRD1A-208ENST00000589050 SPATA33Q96N06 139 aa17.49■□□□□ 0.39
RPRD1A-208ENST00000589050 ZNF396Q96N95 335 aaPredicted RBP17.49■□□□□ 0.39
RPRD1A-208ENST00000589050 RIT2Q99578 217 aa17.49■□□□□ 0.39
RPRD1A-208ENST00000589050 FTOQ9C0B1 505 aaKnown RBP eCLIP17.49■□□□□ 0.39
RPRD1A-208ENST00000589050 UPF3AQ9H1J1 476 aaKnown RBP17.49■□□□□ 0.39
RPRD1A-208ENST00000589050 JPH1Q9HDC5 661 aaPredicted RBP17.49■□□□□ 0.39
RPRD1A-208ENST00000589050 SLC9A2Q9UBY0 812 aa17.49■□□□□ 0.39
RPRD1A-208ENST00000589050 CLIC4Q9Y696 253 aa17.49■□□□□ 0.39
RPRD1A-208ENST00000589050 POTEFA5A3E0 1075 aa17.48■□□□□ 0.39
RPRD1A-208ENST00000589050 DHX15O43143 795 aaKnown RBP17.48■□□□□ 0.39
RPRD1A-208ENST00000589050 MYCNP04198 464 aaPredicted RBP17.48■□□□□ 0.39
RPRD1A-208ENST00000589050 OR52Z1P0C646 297 aa17.48■□□□□ 0.39
RPRD1A-208ENST00000589050 CEBPZQ03701 1054 aaKnown RBP17.48■□□□□ 0.39
RPRD1A-208ENST00000589050 PTGDRQ13258 359 aa17.48■□□□□ 0.39
RPRD1A-208ENST00000589050 SF3A1Q15459 793 aaKnown RBP17.48■□□□□ 0.39
RPRD1A-208ENST00000589050 TNS4Q8IZW8 715 aa17.48■□□□□ 0.39
RPRD1A-208ENST00000589050 C4orf32Q8N8J7 132 aa17.48■□□□□ 0.39
RPRD1A-208ENST00000589050 AFG1LQ8WV93 481 aa17.48■□□□□ 0.39
RPRD1A-208ENST00000589050 MTMR9Q96QG7 549 aa17.48■□□□□ 0.39
RPRD1A-208ENST00000589050 TEKT3Q9BXF9 490 aa17.48■□□□□ 0.39
RPRD1A-208ENST00000589050 CHMP5Q9NZZ3 219 aa17.48■□□□□ 0.39
RPRD1A-208ENST00000589050 TCEAL9Q9UHQ7 104 aa17.48■□□□□ 0.39
RPRD1A-208ENST00000589050 CEP131Q9UPN4 1083 aa17.48■□□□□ 0.39
RPRD1A-208ENST00000589050 ATP6V1DQ9Y5K8 247 aa17.48■□□□□ 0.39
RPRD1A-208ENST00000589050 KIAA1217Q5T5P2 1943 aa17.48■□□□□ 0.39
RPRD1A-208ENST00000589050 MYADML2A6NDP7 307 aa17.47■□□□□ 0.39
RPRD1A-208ENST00000589050 NOP56O00567 594 aaKnown RBP17.47■□□□□ 0.39
RPRD1A-208ENST00000589050 ADAMTS4O75173 837 aa17.47■□□□□ 0.39
RPRD1A-208ENST00000589050 PSMD10O75832 226 aa17.47■□□□□ 0.39
RPRD1A-208ENST00000589050 SGPL1O95470 568 aa17.47■□□□□ 0.39
RPRD1A-208ENST00000589050 BMP15O95972 392 aa17.47■□□□□ 0.39
RPRD1A-208ENST00000589050 TFRCP02786 760 aaKnown RBP17.47■□□□□ 0.39
RPRD1A-208ENST00000589050 TXKP42681 527 aa17.47■□□□□ 0.39
RPRD1A-208ENST00000589050 CPT1AP50416 773 aa17.47■□□□□ 0.39
RPRD1A-208ENST00000589050 IRX5P78411 483 aaPredicted RBP17.47■□□□□ 0.39
RPRD1A-208ENST00000589050 BEX3Q00994 111 aa17.47■□□□□ 0.39
RPRD1A-208ENST00000589050 FSCN1Q16658 493 aaKnown RBP17.47■□□□□ 0.39
RPRD1A-208ENST00000589050 HSDL1Q3SXM5 330 aa17.47■□□□□ 0.39
RPRD1A-208ENST00000589050 BRDTQ58F21 947 aaPredicted RBP17.47■□□□□ 0.39
RPRD1A-208ENST00000589050 RNF180Q86T96 592 aa17.47■□□□□ 0.39
RPRD1A-208ENST00000589050 PPTC7Q8NI37 304 aa17.47■□□□□ 0.39
RPRD1A-208ENST00000589050 ABHD8Q96I13 439 aa17.47■□□□□ 0.39
RPRD1A-208ENST00000589050 USP28Q96RU2 1077 aa17.47■□□□□ 0.39
RPRD1A-208ENST00000589050 TFIP11Q9UBB9 837 aaKnown RBP17.47■□□□□ 0.39
RPRD1A-208ENST00000589050 LAD1O00515 517 aa17.46■□□□□ 0.39
RPRD1A-208ENST00000589050 CTAGE5O15320 804 aa17.46■□□□□ 0.39
RPRD1A-208ENST00000589050 CHMP2AO43633 222 aa17.46■□□□□ 0.39
RPRD1A-208ENST00000589050 CCNE2O96020 404 aa17.46■□□□□ 0.39
RPRD1A-208ENST00000589050 GJA8P48165 433 aa17.46■□□□□ 0.39
RPRD1A-208ENST00000589050 NKX3-2P78367 333 aa17.46■□□□□ 0.39
RPRD1A-208ENST00000589050 ATP2C1P98194 919 aaPredicted RBP17.46■□□□□ 0.39
RPRD1A-208ENST00000589050 KRT76Q01546 638 aa17.46■□□□□ 0.39
RPRD1A-208ENST00000589050 DNM1Q05193 864 aaKnown RBP17.46■□□□□ 0.39
RPRD1A-208ENST00000589050 LRRC41Q15345 812 aa17.46■□□□□ 0.39
RPRD1A-208ENST00000589050 GNASQ5JWF2 1037 aa17.46■□□□□ 0.39
RPRD1A-208ENST00000589050 ARRDC4Q8NCT1 418 aa17.46■□□□□ 0.39
RPRD1A-208ENST00000589050 GPR20Q99678 358 aa17.46■□□□□ 0.39
RPRD1A-208ENST00000589050 CRISPLD2Q9H0B8 497 aa17.46■□□□□ 0.39
RPRD1A-208ENST00000589050 TTC12Q9H892 705 aaPredicted RBP17.46■□□□□ 0.39
RPRD1A-208ENST00000589050 OGDHLQ9ULD0 1010 aa17.46■□□□□ 0.39
RPRD1A-208ENST00000589050 TELO2Q9Y4R8 837 aa17.46■□□□□ 0.39
RPRD1A-208ENST00000589050 A6NJR5 290 aa17.45■□□□□ 0.38
RPRD1A-208ENST00000589050 MMP3P08254 477 aa17.45■□□□□ 0.38
RPRD1A-208ENST00000589050 CST5P28325 142 aaPredicted RBP17.45■□□□□ 0.38
RPRD1A-208ENST00000589050 ACTR2P61160 394 aa17.45■□□□□ 0.38
RPRD1A-208ENST00000589050 ATL3Q6DD88 541 aa17.45■□□□□ 0.38
RPRD1A-208ENST00000589050 ZNF746Q6NUN9 644 aaPredicted RBP17.45■□□□□ 0.38
RPRD1A-208ENST00000589050 KLHDC9Q8NEP7 349 aa17.45■□□□□ 0.38
RPRD1A-208ENST00000589050 UNC45AQ9H3U1 944 aa17.45■□□□□ 0.38
RPRD1A-208ENST00000589050 POLR3EQ9NVU0 708 aa17.45■□□□□ 0.38
RPRD1A-208ENST00000589050 VAV3Q9UKW4 847 aa17.45■□□□□ 0.38
RPRD1A-208ENST00000589050 PCDHA12Q9UN75 941 aa17.45■□□□□ 0.38
RPRD1A-208ENST00000589050 ELP1O95163 1332 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms