RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 ZNF200P98182 395 aaPredicted RBP13.25□□□□□ -0.29
RFX1-204ENST00000588885 UTP14CQ5TAP6 766 aaKnown RBP13.25□□□□□ -0.29
RFX1-204ENST00000588885 PCNX4Q63HM2 1172 aa13.25□□□□□ -0.29
RFX1-204ENST00000588885 TYW1BQ6NUM6 668 aa13.25□□□□□ -0.29
RFX1-204ENST00000588885 PSRC1Q6PGN9 363 aaPredicted RBP13.25□□□□□ -0.29
RFX1-204ENST00000588885 GUCD1Q96NT3 240 aa13.25□□□□□ -0.29
RFX1-204ENST00000588885 INPP4AQ96PE3 977 aaPredicted RBP13.25□□□□□ -0.29
RFX1-204ENST00000588885 KIF2CQ99661 725 aa13.25□□□□□ -0.29
RFX1-204ENST00000588885 LARP6Q9BRS8 491 aaKnown RBP13.25□□□□□ -0.29
RFX1-204ENST00000588885 SEMA6BQ9H3T3 888 aa13.25□□□□□ -0.29
RFX1-204ENST00000588885 KIAA1217Q5T5P2 1943 aa13.24□□□□□ -0.29
RFX1-204ENST00000588885 SMCO2A6NFE2 343 aa13.24□□□□□ -0.29
RFX1-204ENST00000588885 ZBBXA8MT70 800 aa13.24□□□□□ -0.29
RFX1-204ENST00000588885 FIBPO43427 364 aa13.24□□□□□ -0.29
RFX1-204ENST00000588885 STAM2O75886 525 aa13.24□□□□□ -0.29
RFX1-204ENST00000588885 FOSL2P15408 326 aa13.24□□□□□ -0.29
RFX1-204ENST00000588885 PSMA5P28066 241 aa13.24□□□□□ -0.29
RFX1-204ENST00000588885 ICAM3P32942 547 aa13.24□□□□□ -0.29
RFX1-204ENST00000588885 PBX2P40425 430 aa13.24□□□□□ -0.29
RFX1-204ENST00000588885 PTPN11Q06124 597 aaPredicted RBP13.24□□□□□ -0.29
RFX1-204ENST00000588885 NEDD9Q14511 834 aa13.24□□□□□ -0.29
RFX1-204ENST00000588885 NLRX1Q86UT6 975 aa13.24□□□□□ -0.29
RFX1-204ENST00000588885 RPUSD2Q8IZ73 545 aaKnown RBP13.24□□□□□ -0.29
RFX1-204ENST00000588885 HERVK_113Q902F9 699 aa13.24□□□□□ -0.29
RFX1-204ENST00000588885 VWCEQ96DN2 955 aa13.24□□□□□ -0.29
RFX1-204ENST00000588885 CTAGE1Q96RT6 745 aa13.24□□□□□ -0.29
RFX1-204ENST00000588885 FTOQ9C0B1 505 aaKnown RBP eCLIP13.24□□□□□ -0.29
RFX1-204ENST00000588885 TTYH1Q9H313 450 aaPredicted RBP13.24□□□□□ -0.29
RFX1-204ENST00000588885 TMEM260Q9NX78 707 aa13.24□□□□□ -0.29
RFX1-204ENST00000588885 CDH23Q9H251 3354 aa13.24□□□□□ -0.29
RFX1-204ENST00000588885 TRIP12Q14669 1992 aaPredicted RBP13.23□□□□□ -0.29
RFX1-204ENST00000588885 STXBP3O00186 592 aa13.23□□□□□ -0.29
RFX1-204ENST00000588885 ATP9AO75110 1047 aa13.23□□□□□ -0.29
RFX1-204ENST00000588885 F2P00734 622 aa13.23□□□□□ -0.29
RFX1-204ENST00000588885 ITGB5P18084 799 aa13.23□□□□□ -0.29
RFX1-204ENST00000588885 ADCY7P51828 1080 aa13.23□□□□□ -0.29
RFX1-204ENST00000588885 CCT2P78371 535 aaKnown RBP13.23□□□□□ -0.29
RFX1-204ENST00000588885 BFSP2Q13515 415 aa13.23□□□□□ -0.29
RFX1-204ENST00000588885 HIC1Q14526 733 aa13.23□□□□□ -0.29
RFX1-204ENST00000588885 XRRA1Q6P2D8 792 aa13.23□□□□□ -0.29
RFX1-204ENST00000588885 METTL7BQ6UX53 244 aa13.23□□□□□ -0.29
RFX1-204ENST00000588885 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.23□□□□□ -0.29
RFX1-204ENST00000588885 MAFAQ8NHW3 353 aaPredicted RBP13.23□□□□□ -0.29
RFX1-204ENST00000588885 DHX38Q92620 1227 aaKnown RBP13.23□□□□□ -0.29
RFX1-204ENST00000588885 CDX2Q99626 313 aaPredicted RBP13.23□□□□□ -0.29
RFX1-204ENST00000588885 GPR20Q99678 358 aa13.23□□□□□ -0.29
RFX1-204ENST00000588885 C16orf70Q9BSU1 422 aa13.23□□□□□ -0.29
RFX1-204ENST00000588885 KATNAL1Q9BW62 490 aa13.23□□□□□ -0.29
RFX1-204ENST00000588885 MTIF3Q9H2K0 278 aaKnown RBP13.23□□□□□ -0.29
RFX1-204ENST00000588885 RIC8AQ9NPQ8 531 aa13.23□□□□□ -0.29
RFX1-204ENST00000588885 GTF2IRD1Q9UHL9 959 aa13.23□□□□□ -0.29
RFX1-204ENST00000588885 EYSQ5T1H1 3165 aa13.22□□□□□ -0.29
RFX1-204ENST00000588885 CCDC196A0A1B0GTZ2 297 aa13.22□□□□□ -0.29
RFX1-204ENST00000588885 HAS3O00219 553 aa13.22□□□□□ -0.29
RFX1-204ENST00000588885 ADAMTS3O15072 1205 aa13.22□□□□□ -0.29
RFX1-204ENST00000588885 LGALS2P05162 132 aa13.22□□□□□ -0.29
RFX1-204ENST00000588885 IQCF3P0C7M6 154 aa13.22□□□□□ -0.29
RFX1-204ENST00000588885 HOXD8P13378 290 aaPredicted RBP13.22□□□□□ -0.29
RFX1-204ENST00000588885 DNAJB2P25686 324 aa13.22□□□□□ -0.29
RFX1-204ENST00000588885 RABGGTBP53611 331 aa13.22□□□□□ -0.29
RFX1-204ENST00000588885 RASIP1Q5U651 963 aa13.22□□□□□ -0.29
RFX1-204ENST00000588885 RUFY3Q7L099 469 aa13.22□□□□□ -0.29
RFX1-204ENST00000588885 SESTD1Q86VW0 696 aa13.22□□□□□ -0.29
RFX1-204ENST00000588885 TRIM50Q86XT4 487 aa13.22□□□□□ -0.29
RFX1-204ENST00000588885 CYP2W1Q8TAV3 490 aa13.22□□□□□ -0.29
RFX1-204ENST00000588885 MYLIPQ8WY64 445 aa13.22□□□□□ -0.29
RFX1-204ENST00000588885 PHKBQ93100 1093 aa13.22□□□□□ -0.29
RFX1-204ENST00000588885 IL17RAQ96F46 866 aa13.22□□□□□ -0.29
RFX1-204ENST00000588885 UIMC1Q96RL1 719 aa13.22□□□□□ -0.29
RFX1-204ENST00000588885 PBX4Q9BYU1 374 aa13.22□□□□□ -0.29
RFX1-204ENST00000588885 UPF3BQ9BZI7 483 aaKnown RBP13.22□□□□□ -0.29
RFX1-204ENST00000588885 NCOA5Q9HCD5 579 aaKnown RBP13.22□□□□□ -0.29
RFX1-204ENST00000588885 BARHL2Q9NY43 387 aa13.22□□□□□ -0.29
RFX1-204ENST00000588885 SCN5AQ14524 2016 aa13.22□□□□□ -0.29
RFX1-204ENST00000588885 PRUNE2Q8WUY3 3088 aa13.21□□□□□ -0.29
RFX1-204ENST00000588885 H3BRB1 525 aa13.21□□□□□ -0.29
RFX1-204ENST00000588885 PDIA3P30101 505 aaKnown RBP13.21□□□□□ -0.29
RFX1-204ENST00000588885 ANAPC15P60006 121 aa13.21□□□□□ -0.29
RFX1-204ENST00000588885 AKAP17AQ02040 695 aaKnown RBP13.21□□□□□ -0.29
RFX1-204ENST00000588885 MTMR1Q13613 665 aa13.21□□□□□ -0.29
RFX1-204ENST00000588885 PFKFB3Q16875 520 aaPredicted RBP13.21□□□□□ -0.29
RFX1-204ENST00000588885 JAKMIP3Q5VZ66 844 aa13.21□□□□□ -0.29
RFX1-204ENST00000588885 WNT8BQ93098 351 aa13.21□□□□□ -0.29
RFX1-204ENST00000588885 TIFAQ96CG3 184 aa13.21□□□□□ -0.29
RFX1-204ENST00000588885 GPRASP2Q96D09 838 aa13.21□□□□□ -0.29
RFX1-204ENST00000588885 SLC26A6Q9BXS9 759 aa13.21□□□□□ -0.29
RFX1-204ENST00000588885 TUT1Q9H6E5 874 aaKnown RBP13.21□□□□□ -0.29
RFX1-204ENST00000588885 EHMT1Q9H9B1 1298 aa13.21□□□□□ -0.29
RFX1-204ENST00000588885 ZSWIM6Q9HCJ5 1215 aa13.21□□□□□ -0.29
RFX1-204ENST00000588885 UBIAD1Q9Y5Z9 338 aa13.21□□□□□ -0.29
RFX1-204ENST00000588885 CYP46A1Q9Y6A2 500 aa13.21□□□□□ -0.29
RFX1-204ENST00000588885 SLC4A7Q9Y6M7 1214 aa13.21□□□□□ -0.29
RFX1-204ENST00000588885 CHD9Q3L8U1 2897 aa13.21□□□□□ -0.3
RFX1-204ENST00000588885 C17orf102A2RUQ5 167 aa13.2□□□□□ -0.3
RFX1-204ENST00000588885 SMIM10L2AP0DMW4 78 aa13.2□□□□□ -0.3
RFX1-204ENST00000588885 SMIM10L2BP0DMW5 78 aa13.2□□□□□ -0.3
RFX1-204ENST00000588885 CKBP12277 381 aa13.2□□□□□ -0.3
RFX1-204ENST00000588885 SCG2P13521 617 aa13.2□□□□□ -0.3
RFX1-204ENST00000588885 MYOGP15173 224 aa13.2□□□□□ -0.3
RFX1-204ENST00000588885 SELPP16109 830 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms