RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 CCDC27Q2M243 656 aa8.44□□□□□ -1.06
TPM4-210ENST00000588507 RABL6Q3YEC7 729 aaPredicted RBP8.44□□□□□ -1.06
TPM4-210ENST00000588507 OTOP3Q7RTS5 596 aa8.44□□□□□ -1.06
TPM4-210ENST00000588507 ATG9AQ7Z3C6 839 aa8.44□□□□□ -1.06
TPM4-210ENST00000588507 CPXCR1Q8N123 301 aa8.44□□□□□ -1.06
TPM4-210ENST00000588507 TSPYL6Q8N831 410 aa8.44□□□□□ -1.06
TPM4-210ENST00000588507 C12orf50Q8NA57 414 aaPredicted RBP8.44□□□□□ -1.06
TPM4-210ENST00000588507 FOXQ1Q9C009 403 aa8.44□□□□□ -1.06
TPM4-210ENST00000588507 BICC1Q9H694 974 aaKnown RBP8.44□□□□□ -1.06
TPM4-210ENST00000588507 ARHGEF3Q9NR81 526 aa8.44□□□□□ -1.06
TPM4-210ENST00000588507 IFT57Q9NWB7 429 aa8.44□□□□□ -1.06
TPM4-210ENST00000588507 GTF2IRD1Q9UHL9 959 aa8.44□□□□□ -1.06
TPM4-210ENST00000588507 MRPL42Q9Y6G3 142 aaKnown RBP8.44□□□□□ -1.06
TPM4-210ENST00000588507 TICRRQ7Z2Z1 1910 aa8.44□□□□□ -1.06
TPM4-210ENST00000588507 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.43□□□□□ -1.06
TPM4-210ENST00000588507 ENO4A6NNW6 628 aa8.43□□□□□ -1.06
TPM4-210ENST00000588507 GIPC1O14908 333 aa8.43□□□□□ -1.06
TPM4-210ENST00000588507 ATP2A1O14983 1001 aa8.43□□□□□ -1.06
TPM4-210ENST00000588507 CCR10P46092 362 aa8.43□□□□□ -1.06
TPM4-210ENST00000588507 RIPPLY3P57055 190 aa8.43□□□□□ -1.06
TPM4-210ENST00000588507 KIAA1841Q6NSI8 718 aa8.43□□□□□ -1.06
TPM4-210ENST00000588507 TSSK4Q6SA08 328 aa8.43□□□□□ -1.06
TPM4-210ENST00000588507 TTC6Q86TZ1 520 aa8.43□□□□□ -1.06
TPM4-210ENST00000588507 WNT8BQ93098 351 aa8.43□□□□□ -1.06
TPM4-210ENST00000588507 ZFP91Q96JP5 570 aaPredicted RBP8.43□□□□□ -1.06
TPM4-210ENST00000588507 PURBQ96QR8 312 aaKnown RBP8.43□□□□□ -1.06
TPM4-210ENST00000588507 GPR20Q99678 358 aa8.43□□□□□ -1.06
TPM4-210ENST00000588507 CEP126Q9P2H0 1117 aa8.43□□□□□ -1.06
TPM4-210ENST00000588507 COG6Q9Y2V7 657 aa8.43□□□□□ -1.06
TPM4-210ENST00000588507 CTDP1Q9Y5B0 961 aaPredicted RBP8.43□□□□□ -1.06
TPM4-210ENST00000588507 DDX49Q9Y6V7 483 aaKnown RBP8.43□□□□□ -1.06
TPM4-210ENST00000588507 C2CD3Q4AC94 2353 aa8.43□□□□□ -1.06
TPM4-210ENST00000588507 ITPR3Q14573 2671 aa8.43□□□□□ -1.06
TPM4-210ENST00000588507 WDFY3Q8IZQ1 3526 aa8.42□□□□□ -1.06
TPM4-210ENST00000588507 ZBED4O75132 1171 aa8.42□□□□□ -1.06
TPM4-210ENST00000588507 CAPNS1P04632 268 aa8.42□□□□□ -1.06
TPM4-210ENST00000588507 SRFP11831 508 aa8.42□□□□□ -1.06
TPM4-210ENST00000588507 MAGEA9P43362 315 aa8.42□□□□□ -1.06
TPM4-210ENST00000588507 NRLP54845 237 aa8.42□□□□□ -1.06
TPM4-210ENST00000588507 ERVFC1P60507 584 aa8.42□□□□□ -1.06
TPM4-210ENST00000588507 DCLRE1AQ6PJP8 1040 aa8.42□□□□□ -1.06
TPM4-210ENST00000588507 TBC1D9Q6ZT07 1266 aa8.42□□□□□ -1.06
TPM4-210ENST00000588507 SIAH1Q8IUQ4 282 aa8.42□□□□□ -1.06
TPM4-210ENST00000588507 C7orf31Q8N865 590 aa8.42□□□□□ -1.06
TPM4-210ENST00000588507 GPR152Q8TDT2 470 aa8.42□□□□□ -1.06
TPM4-210ENST00000588507 APBB2Q92870 758 aa8.42□□□□□ -1.06
TPM4-210ENST00000588507 SHDQ96IW2 340 aa8.42□□□□□ -1.06
TPM4-210ENST00000588507 SLF1Q9BQI6 1058 aa8.42□□□□□ -1.06
TPM4-210ENST00000588507 MKNK1Q9BUB5 465 aa8.42□□□□□ -1.06
TPM4-210ENST00000588507 HDAC6Q9UBN7 1215 aa8.42□□□□□ -1.06
TPM4-210ENST00000588507 F6X3S4 739 aa8.41□□□□□ -1.06
TPM4-210ENST00000588507 FSCN2O14926 492 aa8.41□□□□□ -1.06
TPM4-210ENST00000588507 NKRFO15226 690 aaKnown RBP eCLIP8.41□□□□□ -1.063e-8■■■□□ 18
TPM4-210ENST00000588507 TREHO43280 583 aa8.41□□□□□ -1.06
TPM4-210ENST00000588507 DGKIO75912 1065 aa8.41□□□□□ -1.06
TPM4-210ENST00000588507 ADORA1P30542 326 aa8.41□□□□□ -1.06
TPM4-210ENST00000588507 THPOP40225 353 aa8.41□□□□□ -1.06
TPM4-210ENST00000588507 STARD6P59095 220 aa8.41□□□□□ -1.06
TPM4-210ENST00000588507 SF3A2Q15428 464 aaKnown RBP8.41□□□□□ -1.06
TPM4-210ENST00000588507 FAM83BQ5T0W9 1011 aa8.41□□□□□ -1.06
TPM4-210ENST00000588507 RARS2Q5T160 578 aaKnown RBP8.41□□□□□ -1.06
TPM4-210ENST00000588507 TMEM179Q6ZVK1 233 aa8.41□□□□□ -1.06
TPM4-210ENST00000588507 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.41□□□□□ -1.06
TPM4-210ENST00000588507 CMTR2Q8IYT2 770 aaKnown RBP8.41□□□□□ -1.06
TPM4-210ENST00000588507 ZNF843Q8N446 348 aa8.41□□□□□ -1.06
TPM4-210ENST00000588507 ANKRD44Q8N8A2 993 aa8.41□□□□□ -1.06
TPM4-210ENST00000588507 AFG1LQ8WV93 481 aa8.41□□□□□ -1.06
TPM4-210ENST00000588507 BCAS3Q9H6U6 928 aa8.41□□□□□ -1.06
TPM4-210ENST00000588507 RAVER2Q9HCJ3 691 aaKnown RBP8.41□□□□□ -1.06
TPM4-210ENST00000588507 LRP2BPQ9P2M1 347 aa8.41□□□□□ -1.06
TPM4-210ENST00000588507 CREBBPQ92793 2442 aa8.41□□□□□ -1.06
TPM4-210ENST00000588507 NOTCH2Q04721 2471 aa8.4□□□□□ -1.06
TPM4-210ENST00000588507 RBM47A0AV96 593 aaKnown RBP8.4□□□□□ -1.06
TPM4-210ENST00000588507 TRIM26Q12899 539 aaPredicted RBP8.4□□□□□ -1.06
TPM4-210ENST00000588507 SIM2Q14190 667 aaPredicted RBP8.4□□□□□ -1.06
TPM4-210ENST00000588507 NAA16Q6N069 864 aaPredicted RBP8.4□□□□□ -1.06
TPM4-210ENST00000588507 SLC44A3Q8N4M1 653 aa8.4□□□□□ -1.06
TPM4-210ENST00000588507 MORC4Q8TE76 937 aa8.4□□□□□ -1.06
TPM4-210ENST00000588507 SCUBE2Q9NQ36 999 aa8.4□□□□□ -1.06
TPM4-210ENST00000588507 PRMT8Q9NR22 394 aaPredicted RBP8.4□□□□□ -1.06
TPM4-210ENST00000588507 CFAP46Q8IYW2 2715 aa8.4□□□□□ -1.06
TPM4-210ENST00000588507 MIA3Q5JRA6 1907 aa8.4□□□□□ -1.06
TPM4-210ENST00000588507 FOCADQ5VW36 1801 aa8.4□□□□□ -1.07
TPM4-210ENST00000588507 PATJQ8NI35 1801 aa8.4□□□□□ -1.07
TPM4-210ENST00000588507 ACACAQ13085 2346 aa8.4□□□□□ -1.07
TPM4-210ENST00000588507 SHROOM3Q8TF72 1996 aa8.39□□□□□ -1.07
TPM4-210ENST00000588507 KALRNO60229 2985 aa8.39□□□□□ -1.07
TPM4-210ENST00000588507 PLXNA4Q9HCM2 1894 aa8.39□□□□□ -1.07
TPM4-210ENST00000588507 FRMPD2Q68DX3 1309 aaPredicted RBP8.39□□□□□ -1.07
TPM4-210ENST00000588507 KANSL1LA0AUZ9 987 aa8.39□□□□□ -1.07
TPM4-210ENST00000588507 ATXN7O15265 892 aaPredicted RBP8.39□□□□□ -1.07
TPM4-210ENST00000588507 HYAL3O43820 417 aaPredicted RBP8.39□□□□□ -1.07
TPM4-210ENST00000588507 ALDH1L1O75891 902 aa8.39□□□□□ -1.07
TPM4-210ENST00000588507 NBPF7P0C2Y1 421 aaPredicted RBP8.39□□□□□ -1.07
TPM4-210ENST00000588507 USP5P45974 858 aa8.39□□□□□ -1.07
TPM4-210ENST00000588507 ICA1Q05084 483 aa8.39□□□□□ -1.07
TPM4-210ENST00000588507 CALD1Q05682 793 aaKnown RBP8.39□□□□□ -1.07
TPM4-210ENST00000588507 PDE4BQ07343 736 aa8.39□□□□□ -1.07
TPM4-210ENST00000588507 PLPP4Q5VZY2 271 aa8.39□□□□□ -1.07
TPM4-210ENST00000588507 KIAA1211LQ6NV74 962 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms