RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 SYNRGQ9UMZ2 1314 aa16.4■□□□□ 0.22
CCDC43-203ENST00000588210 FAM205CA6NFA0 338 aa16.39■□□□□ 0.21
CCDC43-203ENST00000588210 SLC15A5A6NIM6 579 aa16.39■□□□□ 0.21
CCDC43-203ENST00000588210 URI1O94763 535 aaPredicted RBP16.39■□□□□ 0.21
CCDC43-203ENST00000588210 ATP2B1P20020 1258 aa16.39■□□□□ 0.21
CCDC43-203ENST00000588210 CLCN6P51797 869 aa16.39■□□□□ 0.21
CCDC43-203ENST00000588210 IRF5Q13568 498 aa16.39■□□□□ 0.21
CCDC43-203ENST00000588210 GRB14Q14449 540 aa16.39■□□□□ 0.21
CCDC43-203ENST00000588210 MORN1Q5T089 497 aa16.39■□□□□ 0.21
CCDC43-203ENST00000588210 ABRAQ8N0Z2 381 aa16.39■□□□□ 0.21
CCDC43-203ENST00000588210 MNS1Q8NEH6 495 aa16.39■□□□□ 0.21
CCDC43-203ENST00000588210 CHST13Q8NET6 341 aa16.39■□□□□ 0.21
CCDC43-203ENST00000588210 RAET1EQ8TD07 263 aa16.39■□□□□ 0.21
CCDC43-203ENST00000588210 UBXN4Q92575 508 aa16.39■□□□□ 0.21
CCDC43-203ENST00000588210 DHX58Q96C10 678 aa16.39■□□□□ 0.21
CCDC43-203ENST00000588210 RIOX1Q9H6W3 641 aa16.39■□□□□ 0.21
CCDC43-203ENST00000588210 SAMSN1Q9NSI8 373 aaKnown RBP16.39■□□□□ 0.21
CCDC43-203ENST00000588210 A0A087X0B3 334 aa16.39■□□□□ 0.21
CCDC43-203ENST00000588210 EFCAB8A8MWE9 144 aa16.39■□□□□ 0.21
CCDC43-203ENST00000588210 FCER1AP12319 257 aa16.39■□□□□ 0.21
CCDC43-203ENST00000588210 CUL4BQ13620 913 aa16.39■□□□□ 0.21
CCDC43-203ENST00000588210 BMS1Q14692 1282 aaKnown RBP16.39■□□□□ 0.21
CCDC43-203ENST00000588210 CDC37Q16543 378 aaPredicted RBP16.39■□□□□ 0.21
CCDC43-203ENST00000588210 APTXQ7Z2E3 356 aaKnown RBP16.39■□□□□ 0.21
CCDC43-203ENST00000588210 TNFRSF25Q93038 417 aa16.39■□□□□ 0.21
CCDC43-203ENST00000588210 VAT1LQ9HCJ6 419 aa16.39■□□□□ 0.21
CCDC43-203ENST00000588210 CCPG1Q9ULG6 757 aa16.39■□□□□ 0.21
CCDC43-203ENST00000588210 EARS2Q5JPH6 523 aaKnown RBP16.38■□□□□ 0.21
CCDC43-203ENST00000588210 SPATA1Q5VX52 437 aa16.38■□□□□ 0.21
CCDC43-203ENST00000588210 TOGARAM2Q6ZUX3 1019 aa16.38■□□□□ 0.21
CCDC43-203ENST00000588210 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.38■□□□□ 0.21
CCDC43-203ENST00000588210 USP6NLQ92738 828 aa16.38■□□□□ 0.21
CCDC43-203ENST00000588210 MTMR8Q96EF0 704 aa16.38■□□□□ 0.21
CCDC43-203ENST00000588210 PAGE5Q96GU1 130 aa16.38■□□□□ 0.21
CCDC43-203ENST00000588210 SPZ1Q9BXG8 430 aa16.38■□□□□ 0.21
CCDC43-203ENST00000588210 BRMS1Q9HCU9 246 aa16.38■□□□□ 0.21
CCDC43-203ENST00000588210 PTCH2Q9Y6C5 1203 aa16.38■□□□□ 0.21
CCDC43-203ENST00000588210 CNTNAP5Q8WYK1 1306 aa16.38■□□□□ 0.21
CCDC43-203ENST00000588210 PLEKHA8P1O95397 391 aa16.38■□□□□ 0.21
CCDC43-203ENST00000588210 TPM1P09493 284 aa16.38■□□□□ 0.21
CCDC43-203ENST00000588210 ALAS1P13196 640 aa16.38■□□□□ 0.21
CCDC43-203ENST00000588210 RGS2P41220 211 aa16.38■□□□□ 0.21
CCDC43-203ENST00000588210 ADKP55263 362 aaKnown RBP16.38■□□□□ 0.21
CCDC43-203ENST00000588210 DPYDQ12882 1025 aa16.38■□□□□ 0.21
CCDC43-203ENST00000588210 KCTD2Q14681 263 aa16.38■□□□□ 0.21
CCDC43-203ENST00000588210 TMTC3Q6ZXV5 915 aa16.38■□□□□ 0.21
CCDC43-203ENST00000588210 SYMPKQ92797 1274 aaKnown RBP16.38■□□□□ 0.21
CCDC43-203ENST00000588210 TRERF1Q96PN7 1200 aa16.38■□□□□ 0.21
CCDC43-203ENST00000588210 GSDMAQ96QA5 445 aa16.38■□□□□ 0.21
CCDC43-203ENST00000588210 PANX2Q96RD6 677 aa16.38■□□□□ 0.21
CCDC43-203ENST00000588210 ARGLU1Q9NWB6 273 aaPredicted RBP16.38■□□□□ 0.21
CCDC43-203ENST00000588210 ZBTB5O15062 677 aa16.37■□□□□ 0.21
CCDC43-203ENST00000588210 CYTH3O43739 400 aa16.37■□□□□ 0.21
CCDC43-203ENST00000588210 XRCC5P13010 732 aaKnown RBP16.37■□□□□ 0.21
CCDC43-203ENST00000588210 CASQ1P31415 396 aa16.37■□□□□ 0.21
CCDC43-203ENST00000588210 MAP2K5Q13163 448 aa16.37■□□□□ 0.21
CCDC43-203ENST00000588210 NPY5RQ15761 445 aa16.37■□□□□ 0.21
CCDC43-203ENST00000588210 QRICH1Q2TAL8 776 aa16.37■□□□□ 0.21
CCDC43-203ENST00000588210 CDKAL1Q5VV42 579 aa16.37■□□□□ 0.21
CCDC43-203ENST00000588210 EPSTI1Q96J88 318 aa16.37■□□□□ 0.21
CCDC43-203ENST00000588210 MMP19Q99542 508 aa16.37■□□□□ 0.21
CCDC43-203ENST00000588210 CARD6Q9BX69 1037 aa16.37■□□□□ 0.21
CCDC43-203ENST00000588210 ACAD9Q9H845 621 aa16.37■□□□□ 0.21
CCDC43-203ENST00000588210 RNF146Q9NTX7 359 aa16.37■□□□□ 0.21
CCDC43-203ENST00000588210 PLXNB2O15031 1838 aa16.36■□□□□ 0.21
CCDC43-203ENST00000588210 AKR1B15C9JRZ8 316 aaPredicted RBP16.36■□□□□ 0.21
CCDC43-203ENST00000588210 ADORA2AP29274 412 aa16.36■□□□□ 0.21
CCDC43-203ENST00000588210 PBX1P40424 430 aa16.36■□□□□ 0.21
CCDC43-203ENST00000588210 GNG11P61952 73 aa16.36■□□□□ 0.21
CCDC43-203ENST00000588210 SLC35G1Q2M3R5 365 aa16.36■□□□□ 0.21
CCDC43-203ENST00000588210 PXYLP1Q8TE99 480 aa16.36■□□□□ 0.21
CCDC43-203ENST00000588210 HOMER2Q9NSB8 354 aa16.36■□□□□ 0.21
CCDC43-203ENST00000588210 FHOD1Q9Y613 1164 aa16.36■□□□□ 0.21
CCDC43-203ENST00000588210 ZRANB2O95218 330 aaKnown RBP eCLIP16.36■□□□□ 0.21
CCDC43-203ENST00000588210 HOXC6P09630 235 aa16.36■□□□□ 0.21
CCDC43-203ENST00000588210 CD44P16070 742 aaKnown RBP16.36■□□□□ 0.21
CCDC43-203ENST00000588210 CYP2B6P20813 491 aa16.36■□□□□ 0.21
CCDC43-203ENST00000588210 FAM193AP78312 1265 aa16.36■□□□□ 0.21
CCDC43-203ENST00000588210 ATP2C1P98194 919 aaPredicted RBP16.36■□□□□ 0.21
CCDC43-203ENST00000588210 TRAF1Q13077 416 aa16.36■□□□□ 0.21
CCDC43-203ENST00000588210 TERF2Q15554 542 aa16.36■□□□□ 0.21
CCDC43-203ENST00000588210 TTC38Q5R3I4 469 aa16.36■□□□□ 0.21
CCDC43-203ENST00000588210 FBXO11Q86XK2 927 aa16.36■□□□□ 0.21
CCDC43-203ENST00000588210 TNS4Q8IZW8 715 aa16.36■□□□□ 0.21
CCDC43-203ENST00000588210 SRBD1Q8N5C6 995 aaKnown RBP16.36■□□□□ 0.21
CCDC43-203ENST00000588210 SLAIN1Q8ND83 568 aa16.36■□□□□ 0.21
CCDC43-203ENST00000588210 CTAGE1Q96RT6 745 aa16.36■□□□□ 0.21
CCDC43-203ENST00000588210 WDR24Q96S15 920 aa16.36■□□□□ 0.21
CCDC43-203ENST00000588210 NAA15Q9BXJ9 866 aaKnown RBP16.36■□□□□ 0.21
CCDC43-203ENST00000588210 SLC5A4Q9NY91 659 aa16.36■□□□□ 0.21
CCDC43-203ENST00000588210 MRFAP1Q9Y605 127 aa16.36■□□□□ 0.21
CCDC43-203ENST00000588210 V9GY48 417 aaPredicted RBP16.36■□□□□ 0.21
CCDC43-203ENST00000588210 ZNF236Q9UL36 1845 aa16.36■□□□□ 0.21
CCDC43-203ENST00000588210 WNT7AO00755 349 aa16.35■□□□□ 0.21
CCDC43-203ENST00000588210 ADCY3O60266 1144 aa16.35■□□□□ 0.21
CCDC43-203ENST00000588210 AFMP43652 599 aa16.35■□□□□ 0.21
CCDC43-203ENST00000588210 DPP9Q86TI2 863 aa16.35■□□□□ 0.21
CCDC43-203ENST00000588210 PIGSQ96S52 555 aa16.35■□□□□ 0.21
CCDC43-203ENST00000588210 APBA2Q99767 749 aa16.35■□□□□ 0.21
CCDC43-203ENST00000588210 AMNQ9BXJ7 453 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms