RNA–Protein interactions for RNA: ENST00000588055.1

SDHDP1-201, Transcript of succinate dehydrogenase complex subunit D pseudogene 1, humanhuman

BASIC

Gene SDHDP1, Length 474 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDP1-201ENST00000588055 FAM86B1E9PN63 330 aa13.47□□□□□ -0.25
SDHDP1-201ENST00000588055 IPO5O00410 1097 aaKnown RBP13.47□□□□□ -0.25
SDHDP1-201ENST00000588055 MEIS1O00470 390 aa13.47□□□□□ -0.25
SDHDP1-201ENST00000588055 ADAMTS3O15072 1205 aa13.47□□□□□ -0.25
SDHDP1-201ENST00000588055 MARCH6O60337 910 aa13.47□□□□□ -0.25
SDHDP1-201ENST00000588055 CCNT1O60563 726 aaKnown RBP13.47□□□□□ -0.25
SDHDP1-201ENST00000588055 FAM86B2P0C5J1 330 aa13.47□□□□□ -0.25
SDHDP1-201ENST00000588055 KCNA2P16389 499 aa13.47□□□□□ -0.25
SDHDP1-201ENST00000588055 PTGS1P23219 599 aa13.47□□□□□ -0.25
SDHDP1-201ENST00000588055 CIITAP33076 1130 aa13.47□□□□□ -0.25
SDHDP1-201ENST00000588055 MNX1P50219 401 aaPredicted RBP13.47□□□□□ -0.25
SDHDP1-201ENST00000588055 ATN1P54259 1190 aaPredicted RBP13.47□□□□□ -0.25
SDHDP1-201ENST00000588055 SEMA3FQ13275 785 aa13.47□□□□□ -0.25
SDHDP1-201ENST00000588055 BECN1Q14457 450 aa13.47□□□□□ -0.25
SDHDP1-201ENST00000588055 TMEM63BQ5T3F8 832 aa13.47□□□□□ -0.25
SDHDP1-201ENST00000588055 MYSM1Q5VVJ2 828 aa13.47□□□□□ -0.25
SDHDP1-201ENST00000588055 MCTP1Q6DN14 999 aa13.47□□□□□ -0.25
SDHDP1-201ENST00000588055 CXCL17Q6UXB2 119 aa13.47□□□□□ -0.25
SDHDP1-201ENST00000588055 DPF3Q92784 378 aa13.47□□□□□ -0.25
SDHDP1-201ENST00000588055 SEZ6LQ9BYH1 1024 aa13.47□□□□□ -0.25
SDHDP1-201ENST00000588055 AGO4Q9HCK5 861 aaKnown RBP13.47□□□□□ -0.25
SDHDP1-201ENST00000588055 SLC9A2Q9UBY0 812 aa13.47□□□□□ -0.25
SDHDP1-201ENST00000588055 DDX25Q9UHL0 483 aaKnown RBP13.47□□□□□ -0.25
SDHDP1-201ENST00000588055 ZNF215Q9UL58 517 aaPredicted RBP13.47□□□□□ -0.25
SDHDP1-201ENST00000588055 IGLV3-22A0A075B6J6 115 aa13.46□□□□□ -0.25
SDHDP1-201ENST00000588055 CTAGE5O15320 804 aa13.46□□□□□ -0.25
SDHDP1-201ENST00000588055 EVI5O60447 810 aa13.46□□□□□ -0.25
SDHDP1-201ENST00000588055 PURAQ00577 322 aaKnown RBP13.46□□□□□ -0.25
SDHDP1-201ENST00000588055 SP2Q02086 613 aa13.46□□□□□ -0.25
SDHDP1-201ENST00000588055 Q4G0T1 1027 aa13.46□□□□□ -0.25
SDHDP1-201ENST00000588055 LARP1BQ659C4 914 aaKnown RBP13.46□□□□□ -0.25
SDHDP1-201ENST00000588055 CCSAPQ6IQ19 270 aaPredicted RBP13.46□□□□□ -0.25
SDHDP1-201ENST00000588055 NOSTRINQ8IVI9 506 aa13.46□□□□□ -0.25
SDHDP1-201ENST00000588055 CYP2W1Q8TAV3 490 aa13.46□□□□□ -0.25
SDHDP1-201ENST00000588055 TBC1D22BQ9NU19 505 aa13.46□□□□□ -0.25
SDHDP1-201ENST00000588055 DOCK5Q9H7D0 1870 aa13.46□□□□□ -0.26
SDHDP1-201ENST00000588055 VPS37CA5D8V6 355 aaPredicted RBP13.45□□□□□ -0.26
SDHDP1-201ENST00000588055 DDX39AO00148 427 aaKnown RBP13.45□□□□□ -0.26
SDHDP1-201ENST00000588055 GAS7O60861 476 aa13.45□□□□□ -0.26
SDHDP1-201ENST00000588055 PPFIA4O75335 1185 aa13.45□□□□□ -0.26
SDHDP1-201ENST00000588055 TDP2O95551 362 aa13.45□□□□□ -0.26
SDHDP1-201ENST00000588055 ZNF286BP0CG31 522 aa13.45□□□□□ -0.26
SDHDP1-201ENST00000588055 ARP10275 920 aa13.45□□□□□ -0.26
SDHDP1-201ENST00000588055 CHMP4BP1P59074 171 aa13.45□□□□□ -0.26
SDHDP1-201ENST00000588055 IRX5P78411 483 aaPredicted RBP13.45□□□□□ -0.26
SDHDP1-201ENST00000588055 HSDL1Q3SXM5 330 aa13.45□□□□□ -0.26
SDHDP1-201ENST00000588055 PPP4R3AQ6IN85 833 aa13.45□□□□□ -0.26
SDHDP1-201ENST00000588055 TNFRSF25Q93038 417 aa13.45□□□□□ -0.26
SDHDP1-201ENST00000588055 AZI2Q9H6S1 392 aa13.45□□□□□ -0.26
SDHDP1-201ENST00000588055 PRKAG2Q9UGJ0 569 aa13.45□□□□□ -0.26
SDHDP1-201ENST00000588055 ATP11BQ9Y2G3 1177 aa13.45□□□□□ -0.26
SDHDP1-201ENST00000588055 NR2E3Q9Y5X4 410 aa13.45□□□□□ -0.26
SDHDP1-201ENST00000588055 CYP3A7-CYP3A51PA0A087WV96 503 aa13.44□□□□□ -0.26
SDHDP1-201ENST00000588055 TLR3O15455 904 aaKnown RBP13.44□□□□□ -0.26
SDHDP1-201ENST00000588055 NEMFO60524 1076 aa13.44□□□□□ -0.26
SDHDP1-201ENST00000588055 ATP9AO75110 1047 aa13.44□□□□□ -0.26
SDHDP1-201ENST00000588055 BAG4O95429 457 aaKnown RBP13.44□□□□□ -0.26
SDHDP1-201ENST00000588055 CYP3A7P24462 503 aa13.44□□□□□ -0.26
SDHDP1-201ENST00000588055 TCF7P36402 384 aaPredicted RBP13.44□□□□□ -0.26
SDHDP1-201ENST00000588055 TRAPPC10P48553 1259 aa13.44□□□□□ -0.26
SDHDP1-201ENST00000588055 RTP1P59025 263 aa13.44□□□□□ -0.26
SDHDP1-201ENST00000588055 KRT76Q01546 638 aa13.44□□□□□ -0.26
SDHDP1-201ENST00000588055 ITGA7Q13683 1181 aa13.44□□□□□ -0.26
SDHDP1-201ENST00000588055 LRRC26Q2I0M4 334 aa13.44□□□□□ -0.26
SDHDP1-201ENST00000588055 FAM47CQ5HY64 1035 aa13.44□□□□□ -0.26
SDHDP1-201ENST00000588055 LRCH2Q5VUJ6 765 aa13.44□□□□□ -0.26
SDHDP1-201ENST00000588055 SLC39A5Q6ZMH5 540 aa13.44□□□□□ -0.26
SDHDP1-201ENST00000588055 C7orf61Q8IZ16 206 aa13.44□□□□□ -0.26
SDHDP1-201ENST00000588055 SEPT1Q8WYJ6 367 aa13.44□□□□□ -0.26
SDHDP1-201ENST00000588055 GPR20Q99678 358 aa13.44□□□□□ -0.26
SDHDP1-201ENST00000588055 TEKT3Q9BXF9 490 aa13.44□□□□□ -0.26
SDHDP1-201ENST00000588055 FOXD4L1Q9NU39 408 aa13.44□□□□□ -0.26
SDHDP1-201ENST00000588055 SAMM50Q9Y512 469 aa13.44□□□□□ -0.26
SDHDP1-201ENST00000588055 DNAH12Q6ZR08 3092 aa13.43□□□□□ -0.26
SDHDP1-201ENST00000588055 DCDC2CA8MYV0 355 aa13.43□□□□□ -0.26
SDHDP1-201ENST00000588055 ARVCFO00192 962 aa13.43□□□□□ -0.26
SDHDP1-201ENST00000588055 PQBP1O60828 265 aaKnown RBP13.43□□□□□ -0.26
SDHDP1-201ENST00000588055 F2P00734 622 aa13.43□□□□□ -0.26
SDHDP1-201ENST00000588055 LGALS2P05162 132 aa13.43□□□□□ -0.26
SDHDP1-201ENST00000588055 HOXD8P13378 290 aaPredicted RBP13.43□□□□□ -0.26
SDHDP1-201ENST00000588055 ATP2B1P20020 1258 aa13.43□□□□□ -0.26
SDHDP1-201ENST00000588055 ACTR2P61160 394 aa13.43□□□□□ -0.26
SDHDP1-201ENST00000588055 ITGB3BPQ13352 177 aaPredicted RBP13.43□□□□□ -0.26
SDHDP1-201ENST00000588055 ORC2Q13416 577 aaPredicted RBP13.43□□□□□ -0.26
SDHDP1-201ENST00000588055 MFSD10Q14728 455 aa13.43□□□□□ -0.26
SDHDP1-201ENST00000588055 SNX17Q15036 470 aa13.43□□□□□ -0.26
SDHDP1-201ENST00000588055 TRIM60Q495X7 471 aa13.43□□□□□ -0.26
SDHDP1-201ENST00000588055 UTP14CQ5TAP6 766 aaKnown RBP13.43□□□□□ -0.26
SDHDP1-201ENST00000588055 C1orf53Q5VUE5 145 aa13.43□□□□□ -0.26
SDHDP1-201ENST00000588055 FAM160B1Q5W0V3 765 aa13.43□□□□□ -0.26
SDHDP1-201ENST00000588055 MIS18BP1Q6P0N0 1132 aa13.43□□□□□ -0.26
SDHDP1-201ENST00000588055 SMAP1Q8IYB5 467 aaPredicted RBP13.43□□□□□ -0.26
SDHDP1-201ENST00000588055 SLFN12Q8IYM2 578 aa13.43□□□□□ -0.26
SDHDP1-201ENST00000588055 GLG1Q92896 1179 aa13.43□□□□□ -0.26
SDHDP1-201ENST00000588055 LENG9Q96B70 501 aa13.43□□□□□ -0.26
SDHDP1-201ENST00000588055 RIT2Q99578 217 aa13.43□□□□□ -0.26
SDHDP1-201ENST00000588055 NOD1Q9Y239 953 aa13.43□□□□□ -0.26
SDHDP1-201ENST00000588055 SCN10AQ9Y5Y9 1956 aa13.42□□□□□ -0.26
SDHDP1-201ENST00000588055 FAM205CA6NFA0 338 aa13.42□□□□□ -0.26
SDHDP1-201ENST00000588055 WDR64B1ANS9 1081 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms