RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 Q8N1Y9 231 aa7.16□□□□□ -1.26
TUBD1-208ENST00000588009 PLD6Q8N2A8 252 aaKnown RBP7.16□□□□□ -1.26
TUBD1-208ENST00000588009 SHKBP1Q8TBC3 707 aa7.16□□□□□ -1.26
TUBD1-208ENST00000588009 NETO1Q8TDF5 533 aa7.16□□□□□ -1.26
TUBD1-208ENST00000588009 TRMT2BQ96GJ1 504 aaKnown RBP7.16□□□□□ -1.26
TUBD1-208ENST00000588009 TCRBV5S4A2TA0A5A2 114 aa7.15□□□□□ -1.26
TUBD1-208ENST00000588009 DVL2O14641 736 aa7.15□□□□□ -1.26
TUBD1-208ENST00000588009 DYRK3O43781 588 aa7.15□□□□□ -1.26
TUBD1-208ENST00000588009 PLIN1O60240 522 aa7.15□□□□□ -1.26
TUBD1-208ENST00000588009 CFBP00751 764 aa7.15□□□□□ -1.26
TUBD1-208ENST00000588009 MYL1P05976 194 aa7.15□□□□□ -1.26
TUBD1-208ENST00000588009 CT47B1P0C2W7 299 aaPredicted RBP7.15□□□□□ -1.26
TUBD1-208ENST00000588009 H2AFB1P0C5Y9 115 aa7.15□□□□□ -1.26
TUBD1-208ENST00000588009 H2AFB2P0C5Z0 115 aa7.15□□□□□ -1.26
TUBD1-208ENST00000588009 SLC9A1P19634 815 aa7.15□□□□□ -1.26
TUBD1-208ENST00000588009 LSP1P33241 339 aa7.15□□□□□ -1.26
TUBD1-208ENST00000588009 RECQLP46063 649 aaPredicted RBP7.15□□□□□ -1.26
TUBD1-208ENST00000588009 PHC1P78364 1004 aa7.15□□□□□ -1.26
TUBD1-208ENST00000588009 SMAD3P84022 425 aaKnown RBP7.15□□□□□ -1.26
TUBD1-208ENST00000588009 IRF9Q00978 393 aa7.15□□□□□ -1.26
TUBD1-208ENST00000588009 SPIRE1Q08AE8 756 aa7.15□□□□□ -1.26
TUBD1-208ENST00000588009 TCIRG1Q13488 830 aa7.15□□□□□ -1.26
TUBD1-208ENST00000588009 BIRC2Q13490 618 aa7.15□□□□□ -1.26
TUBD1-208ENST00000588009 ZNF174Q15697 407 aa7.15□□□□□ -1.26
TUBD1-208ENST00000588009 SMAD2Q15796 467 aaKnown RBP7.15□□□□□ -1.26
TUBD1-208ENST00000588009 CPSF6Q16630 551 aaKnown RBP eCLIP7.15□□□□□ -1.26
TUBD1-208ENST00000588009 HABP4Q5JVS0 413 aaKnown RBP7.15□□□□□ -1.26
TUBD1-208ENST00000588009 GORABQ5T7V8 394 aa7.15□□□□□ -1.26
TUBD1-208ENST00000588009 PTRH1Q86Y79 214 aaKnown RBP7.15□□□□□ -1.26
TUBD1-208ENST00000588009 TEX2Q8IWB9 1127 aa7.15□□□□□ -1.26
TUBD1-208ENST00000588009 CPA6Q8N4T0 437 aa7.15□□□□□ -1.26
TUBD1-208ENST00000588009 MORC4Q8TE76 937 aa7.15□□□□□ -1.26
TUBD1-208ENST00000588009 GULP1Q9UBP9 304 aa7.15□□□□□ -1.26
TUBD1-208ENST00000588009 ZNF652Q9Y2D9 606 aa7.15□□□□□ -1.26
TUBD1-208ENST00000588009 ANKRD6Q9Y2G4 727 aa7.15□□□□□ -1.26
TUBD1-208ENST00000588009 X6R8D5 127 aa7.15□□□□□ -1.26
TUBD1-208ENST00000588009 C22orf46C9J442 243 aa7.14□□□□□ -1.27
TUBD1-208ENST00000588009 KCNK3O14649 394 aa7.14□□□□□ -1.27
TUBD1-208ENST00000588009 NKRFO15226 690 aaKnown RBP eCLIP7.14□□□□□ -1.27
TUBD1-208ENST00000588009 U2AF1L5P0DN76 240 aaPredicted RBP7.14□□□□□ -1.27
TUBD1-208ENST00000588009 FPR2P25090 351 aa7.14□□□□□ -1.27
TUBD1-208ENST00000588009 ITGB7P26010 798 aa7.14□□□□□ -1.27
TUBD1-208ENST00000588009 SCAND1P57086 179 aa7.14□□□□□ -1.27
TUBD1-208ENST00000588009 RBM10P98175 930 aaKnown RBP7.14□□□□□ -1.27
TUBD1-208ENST00000588009 U2AF1Q01081 240 aaKnown RBP eCLIP7.14□□□□□ -1.27
TUBD1-208ENST00000588009 LRRC32Q14392 662 aa7.14□□□□□ -1.27
TUBD1-208ENST00000588009 TMEM240Q5SV17 173 aa7.14□□□□□ -1.27
TUBD1-208ENST00000588009 ANGEL2Q5VTE6 544 aaKnown RBP7.14□□□□□ -1.27
TUBD1-208ENST00000588009 OTOP3Q7RTS5 596 aa7.14□□□□□ -1.27
TUBD1-208ENST00000588009 PNMA8AQ86V59 439 aaPredicted RBP7.14□□□□□ -1.27
TUBD1-208ENST00000588009 TPH2Q8IWU9 490 aa7.14□□□□□ -1.27
TUBD1-208ENST00000588009 EXOC8Q8IYI6 725 aa7.14□□□□□ -1.27
TUBD1-208ENST00000588009 KIAA1958Q8N8K9 716 aa7.14□□□□□ -1.27
TUBD1-208ENST00000588009 RPS6KC1Q96S38 1066 aa7.14□□□□□ -1.27
TUBD1-208ENST00000588009 ELF4Q99607 663 aaPredicted RBP7.14□□□□□ -1.27
TUBD1-208ENST00000588009 EPB41L1Q9H4G0 881 aa7.14□□□□□ -1.27
TUBD1-208ENST00000588009 TOPORSQ9NS56 1045 aaPredicted RBP7.14□□□□□ -1.27
TUBD1-208ENST00000588009 TOMM22Q9NS69 142 aa7.14□□□□□ -1.27
TUBD1-208ENST00000588009 MARCH2Q9P0N8 246 aa7.14□□□□□ -1.27
TUBD1-208ENST00000588009 TNFRSF10DQ9UBN6 386 aa7.14□□□□□ -1.27
TUBD1-208ENST00000588009 PNMA8BQ9ULN7 279 aaPredicted RBP7.14□□□□□ -1.27
TUBD1-208ENST00000588009 GIT1Q9Y2X7 761 aa7.14□□□□□ -1.27
TUBD1-208ENST00000588009 MAN2B1O00754 1011 aa7.13□□□□□ -1.27
TUBD1-208ENST00000588009 CYP26A1O43174 497 aa7.13□□□□□ -1.27
TUBD1-208ENST00000588009 IGLV1-40P01703 118 aa7.13□□□□□ -1.27
TUBD1-208ENST00000588009 PF4V1P10720 104 aa7.13□□□□□ -1.27
TUBD1-208ENST00000588009 KRT85P78386 507 aa7.13□□□□□ -1.27
TUBD1-208ENST00000588009 ODF1Q14990 250 aa7.13□□□□□ -1.27
TUBD1-208ENST00000588009 GPR158Q5T848 1215 aa7.13□□□□□ -1.27
TUBD1-208ENST00000588009 FSTL4Q6MZW2 842 aa7.13□□□□□ -1.27
TUBD1-208ENST00000588009 NOSTRINQ8IVI9 506 aa7.13□□□□□ -1.27
TUBD1-208ENST00000588009 CMIPQ8IY22 773 aa7.13□□□□□ -1.27
TUBD1-208ENST00000588009 ZNF610Q8N9Z0 462 aa7.13□□□□□ -1.27
TUBD1-208ENST00000588009 NLGN2Q8NFZ4 835 aa7.13□□□□□ -1.27
TUBD1-208ENST00000588009 PLEKHO2Q8TD55 490 aa7.13□□□□□ -1.27
TUBD1-208ENST00000588009 SH3RF2Q8TEC5 729 aa7.13□□□□□ -1.27
TUBD1-208ENST00000588009 MKS1Q9NXB0 559 aa7.13□□□□□ -1.27
TUBD1-208ENST00000588009 COA3Q9Y2R0 106 aaPredicted RBP7.13□□□□□ -1.27
TUBD1-208ENST00000588009 NOC2LQ9Y3T9 749 aaKnown RBP7.13□□□□□ -1.27
TUBD1-208ENST00000588009 TRIM75PA6NK02 468 aa7.12□□□□□ -1.27
TUBD1-208ENST00000588009 GOLGA8AA7E2F4 631 aa7.12□□□□□ -1.27
TUBD1-208ENST00000588009 GOLGA8BA8MQT2 603 aa7.12□□□□□ -1.27
TUBD1-208ENST00000588009 FADS2P1A8MWK0 482 aa7.12□□□□□ -1.27
TUBD1-208ENST00000588009 GSC2O15499 205 aa7.12□□□□□ -1.27
TUBD1-208ENST00000588009 PCDHGA12O60330 932 aa7.12□□□□□ -1.27
TUBD1-208ENST00000588009 FUCA1P04066 466 aa7.12□□□□□ -1.27
TUBD1-208ENST00000588009 KIF11P52732 1056 aa7.12□□□□□ -1.27
TUBD1-208ENST00000588009 HDAC1Q13547 482 aaPredicted RBP7.12□□□□□ -1.27
TUBD1-208ENST00000588009 SLC4A10Q6U841 1118 aa7.12□□□□□ -1.27
TUBD1-208ENST00000588009 EP400NLQ6ZTU2 488 aa7.12□□□□□ -1.27
TUBD1-208ENST00000588009 DGKHQ86XP1 1220 aa7.12□□□□□ -1.27
TUBD1-208ENST00000588009 LMBR1Q8WVP7 490 aa7.12□□□□□ -1.27
TUBD1-208ENST00000588009 DLG3Q92796 817 aa7.12□□□□□ -1.27
TUBD1-208ENST00000588009 HHIPL1Q96JK4 782 aa7.12□□□□□ -1.27
TUBD1-208ENST00000588009 JMJD8Q96S16 334 aa7.12□□□□□ -1.27
TUBD1-208ENST00000588009 G6PC3Q9BUM1 346 aa7.12□□□□□ -1.27
TUBD1-208ENST00000588009 ZDHHC5Q9C0B5 715 aa7.12□□□□□ -1.27
TUBD1-208ENST00000588009 OBP2AQ9NY56 170 aa7.12□□□□□ -1.27
TUBD1-208ENST00000588009 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.12□□□□□ -1.27
TUBD1-208ENST00000588009 PCDHGA9Q9Y5G4 932 aaKnown RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms