RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 GMPSP49915 693 aaPredicted RBP10.68□□□□□ -0.7
LINC01539-201ENST00000587904 RASA3Q14644 834 aa10.68□□□□□ -0.7
LINC01539-201ENST00000587904 TMEM132AQ24JP5 1023 aa10.68□□□□□ -0.7
LINC01539-201ENST00000587904 CCDC144BQ3MJ40 725 aa10.68□□□□□ -0.7
LINC01539-201ENST00000587904 SPATA1Q5VX52 437 aa10.68□□□□□ -0.7
LINC01539-201ENST00000587904 HNRNPLLQ8WVV9 542 aaKnown RBP10.68□□□□□ -0.7
LINC01539-201ENST00000587904 MBOAT7Q96N66 472 aa10.68□□□□□ -0.7
LINC01539-201ENST00000587904 MTRQ99707 1265 aa10.68□□□□□ -0.7
LINC01539-201ENST00000587904 FANCLQ9NW38 375 aa10.68□□□□□ -0.7
LINC01539-201ENST00000587904 FEM1BQ9UK73 627 aa10.68□□□□□ -0.7
LINC01539-201ENST00000587904 ODF2LQ9ULJ1 636 aa10.68□□□□□ -0.7
LINC01539-201ENST00000587904 MYH7BA7E2Y1 1941 aa10.68□□□□□ -0.7
LINC01539-201ENST00000587904 PP2D1A8MPX8 630 aa10.67□□□□□ -0.7
LINC01539-201ENST00000587904 MEIS2O14770 477 aa10.67□□□□□ -0.7
LINC01539-201ENST00000587904 TBX3O15119 743 aa10.67□□□□□ -0.7
LINC01539-201ENST00000587904 PLCG1P19174 1290 aa10.67□□□□□ -0.7
LINC01539-201ENST00000587904 TECP42680 631 aa10.67□□□□□ -0.7
LINC01539-201ENST00000587904 TXKP42681 527 aa10.67□□□□□ -0.7
LINC01539-201ENST00000587904 CCNHP51946 323 aaPredicted RBP10.67□□□□□ -0.7
LINC01539-201ENST00000587904 UBASH3AP57075 661 aa10.67□□□□□ -0.7
LINC01539-201ENST00000587904 FMR1Q06787 632 aaKnown RBP eCLIP10.67□□□□□ -0.7
LINC01539-201ENST00000587904 MICALL2Q8IY33 904 aa10.67□□□□□ -0.7
LINC01539-201ENST00000587904 SLFN12Q8IYM2 578 aa10.67□□□□□ -0.7
LINC01539-201ENST00000587904 LRRN4CLQ8ND94 238 aa10.67□□□□□ -0.7
LINC01539-201ENST00000587904 FAM71BQ8TC56 605 aa10.67□□□□□ -0.7
LINC01539-201ENST00000587904 ACER1Q8TDN7 264 aa10.67□□□□□ -0.7
LINC01539-201ENST00000587904 TCP11Q8WWU5 503 aa10.67□□□□□ -0.7
LINC01539-201ENST00000587904 LRRC27Q9C0I9 530 aa10.67□□□□□ -0.7
LINC01539-201ENST00000587904 RANBP17Q9H2T7 1088 aaKnown RBP10.67□□□□□ -0.7
LINC01539-201ENST00000587904 KDM3AQ9Y4C1 1321 aa10.67□□□□□ -0.7
LINC01539-201ENST00000587904 SPDYE3A6NKU9 549 aa10.67□□□□□ -0.7
LINC01539-201ENST00000587904 PPP1R3GB7ZBB8 358 aa10.67□□□□□ -0.7
LINC01539-201ENST00000587904 EDIL3O43854 480 aa10.67□□□□□ -0.7
LINC01539-201ENST00000587904 ATP1A3P13637 1013 aa10.67□□□□□ -0.7
LINC01539-201ENST00000587904 PECAM1P16284 738 aaPredicted RBP10.67□□□□□ -0.7
LINC01539-201ENST00000587904 CDC25AP30304 524 aa10.67□□□□□ -0.7
LINC01539-201ENST00000587904 SREBF1P36956 1147 aa10.67□□□□□ -0.7
LINC01539-201ENST00000587904 CD151P48509 253 aa10.67□□□□□ -0.7
LINC01539-201ENST00000587904 STIM1Q13586 685 aa10.67□□□□□ -0.7
LINC01539-201ENST00000587904 KRT79Q5XKE5 535 aa10.67□□□□□ -0.7
LINC01539-201ENST00000587904 RPUSD2Q8IZ73 545 aaKnown RBP10.67□□□□□ -0.7
LINC01539-201ENST00000587904 MICAL1Q8TDZ2 1067 aa10.67□□□□□ -0.7
LINC01539-201ENST00000587904 CRYGNQ8WXF5 182 aa10.67□□□□□ -0.7
LINC01539-201ENST00000587904 LPAR1Q92633 364 aa10.67□□□□□ -0.7
LINC01539-201ENST00000587904 RABGGTAQ92696 567 aa10.67□□□□□ -0.7
LINC01539-201ENST00000587904 ZKSCAN4Q969J2 545 aaPredicted RBP10.67□□□□□ -0.7
LINC01539-201ENST00000587904 CDK5RAP3Q96JB5 506 aa10.67□□□□□ -0.7
LINC01539-201ENST00000587904 TEPSINQ96N21 525 aa10.67□□□□□ -0.7
LINC01539-201ENST00000587904 BLZF1Q9H2G9 400 aa10.67□□□□□ -0.7
LINC01539-201ENST00000587904 HOMER3Q9NSC5 361 aa10.67□□□□□ -0.7
LINC01539-201ENST00000587904 RWDD2AQ9UIY3 292 aa10.67□□□□□ -0.7
LINC01539-201ENST00000587904 STK24Q9Y6E0 443 aa10.67□□□□□ -0.7
LINC01539-201ENST00000587904 PHF20L1A8MW92 1017 aa10.66□□□□□ -0.7
LINC01539-201ENST00000587904 USP17L15C9J2P7 530 aa10.66□□□□□ -0.7
LINC01539-201ENST00000587904 USP17L13C9JLJ4 530 aa10.66□□□□□ -0.7
LINC01539-201ENST00000587904 USP17L11C9JVI0 530 aa10.66□□□□□ -0.7
LINC01539-201ENST00000587904 USP17L18D6R9N7 530 aa10.66□□□□□ -0.7
LINC01539-201ENST00000587904 USP17L22D6RA61 530 aa10.66□□□□□ -0.7
LINC01539-201ENST00000587904 USP17L17D6RBQ6 530 aa10.66□□□□□ -0.7
LINC01539-201ENST00000587904 USP17L19D6RCP7 530 aa10.66□□□□□ -0.7
LINC01539-201ENST00000587904 USP17L20D6RJB6 530 aa10.66□□□□□ -0.7
LINC01539-201ENST00000587904 CTNND1O60716 968 aaKnown RBP10.66□□□□□ -0.7
LINC01539-201ENST00000587904 RHOBTB3O94955 611 aa10.66□□□□□ -0.7
LINC01539-201ENST00000587904 ARHGAP4P98171 946 aa10.66□□□□□ -0.7
LINC01539-201ENST00000587904 RASSF7Q02833 373 aa10.66□□□□□ -0.7
LINC01539-201ENST00000587904 USP17L24Q0WX57 530 aa10.66□□□□□ -0.7
LINC01539-201ENST00000587904 FAM83BQ5T0W9 1011 aa10.66□□□□□ -0.7
LINC01539-201ENST00000587904 USP17L6PQ6QN14 398 aa10.66□□□□□ -0.7
LINC01539-201ENST00000587904 MIGA2Q7L4E1 593 aa10.66□□□□□ -0.7
LINC01539-201ENST00000587904 TRIM74Q86UV6 250 aa10.66□□□□□ -0.7
LINC01539-201ENST00000587904 TRIM73Q86UV7 250 aa10.66□□□□□ -0.7
LINC01539-201ENST00000587904 SPICE1Q8N0Z3 855 aa10.66□□□□□ -0.7
LINC01539-201ENST00000587904 CTAGE1Q96RT6 745 aa10.66□□□□□ -0.7
LINC01539-201ENST00000587904 C7orf25Q9BPX7 421 aa10.66□□□□□ -0.7
LINC01539-201ENST00000587904 MMTAG2Q9BU76 263 aaKnown RBP10.66□□□□□ -0.7
LINC01539-201ENST00000587904 EHMT1Q9H9B1 1298 aa10.66□□□□□ -0.7
LINC01539-201ENST00000587904 KCNMB3Q9NPA1 279 aa10.66□□□□□ -0.7
LINC01539-201ENST00000587904 CHCHD3Q9NX63 227 aaKnown RBP10.66□□□□□ -0.7
LINC01539-201ENST00000587904 PES1O00541 588 aaKnown RBP10.65□□□□□ -0.7
LINC01539-201ENST00000587904 MARCH6O60337 910 aa10.65□□□□□ -0.7
LINC01539-201ENST00000587904 ABCB11O95342 1321 aa10.65□□□□□ -0.7
LINC01539-201ENST00000587904 CASP1P29466 404 aa10.65□□□□□ -0.7
LINC01539-201ENST00000587904 SLC8A3P57103 927 aa10.65□□□□□ -0.7
LINC01539-201ENST00000587904 SPAG1Q07617 926 aa10.65□□□□□ -0.7
LINC01539-201ENST00000587904 PAK1Q13153 545 aa10.65□□□□□ -0.7
LINC01539-201ENST00000587904 LONRF2Q1L5Z9 754 aa10.65□□□□□ -0.7
LINC01539-201ENST00000587904 KIF4BQ2VIQ3 1234 aa10.65□□□□□ -0.7
LINC01539-201ENST00000587904 Q4G0T1 1027 aa10.65□□□□□ -0.7
LINC01539-201ENST00000587904 TMEM119Q4V9L6 283 aa10.65□□□□□ -0.7
LINC01539-201ENST00000587904 HYIQ5T013 277 aa10.65□□□□□ -0.7
LINC01539-201ENST00000587904 CDKAL1Q5VV42 579 aa10.65□□□□□ -0.7
LINC01539-201ENST00000587904 DCAF15Q66K64 600 aa10.65□□□□□ -0.7
LINC01539-201ENST00000587904 CNNM4Q6P4Q7 775 aa10.65□□□□□ -0.7
LINC01539-201ENST00000587904 HDXQ7Z353 690 aa10.65□□□□□ -0.7
LINC01539-201ENST00000587904 KIAA1328Q86T90 577 aa10.65□□□□□ -0.7
LINC01539-201ENST00000587904 APOBEC3FQ8IUX4 373 aaKnown RBP10.65□□□□□ -0.7
LINC01539-201ENST00000587904 CDAN1Q8IWY9 1227 aa10.65□□□□□ -0.7
LINC01539-201ENST00000587904 STAMQ92783 540 aa10.65□□□□□ -0.7
LINC01539-201ENST00000587904 PPP1R13BQ96KQ4 1090 aa10.65□□□□□ -0.7
LINC01539-201ENST00000587904 TSPAN18Q96SJ8 248 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms