RNA–Protein interactions for RNA: ENST00000587220.5

ZNF540-205, Transcript of zinc finger protein 540, humanhuman

TSL 2

Gene ZNF540, Length 576 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-205ENST00000587220 MYOGP15173 224 aa12.24□□□□□ -0.45
ZNF540-205ENST00000587220 COL9A3Q14050 684 aaPredicted RBP12.24□□□□□ -0.45
ZNF540-205ENST00000587220 RTN1Q16799 776 aa12.24□□□□□ -0.45
ZNF540-205ENST00000587220 APOA5Q6Q788 366 aa12.24□□□□□ -0.45
ZNF540-205ENST00000587220 PHOSPHO2Q8TCD6 241 aa12.24□□□□□ -0.45
ZNF540-205ENST00000587220 DHX38Q92620 1227 aaKnown RBP12.24□□□□□ -0.45
ZNF540-205ENST00000587220 ATP6V0A1Q93050 837 aa12.24□□□□□ -0.45
ZNF540-205ENST00000587220 VWCEQ96DN2 955 aa12.24□□□□□ -0.45
ZNF540-205ENST00000587220 CDHR1Q96JP9 859 aa12.24□□□□□ -0.45
ZNF540-205ENST00000587220 TCEANC2Q96MN5 208 aa12.24□□□□□ -0.45
ZNF540-205ENST00000587220 CTAGE1Q96RT6 745 aa12.24□□□□□ -0.45
ZNF540-205ENST00000587220 C16orf70Q9BSU1 422 aa12.24□□□□□ -0.45
ZNF540-205ENST00000587220 ZBED2Q9BTP6 218 aa12.24□□□□□ -0.45
ZNF540-205ENST00000587220 USP26Q9BXU7 913 aa12.24□□□□□ -0.45
ZNF540-205ENST00000587220 CHD7Q9P2D1 2997 aa12.24□□□□□ -0.45
ZNF540-205ENST00000587220 DOCK5Q9H7D0 1870 aa12.23□□□□□ -0.45
ZNF540-205ENST00000587220 EMSYQ7Z589 1322 aa12.23□□□□□ -0.45
ZNF540-205ENST00000587220 KLF18A0A0U1RQI7 1052 aa12.23□□□□□ -0.45
ZNF540-205ENST00000587220 C17orf102A2RUQ5 167 aa12.23□□□□□ -0.45
ZNF540-205ENST00000587220 CA3P07451 260 aa12.23□□□□□ -0.45
ZNF540-205ENST00000587220 SMIM10L2AP0DMW4 78 aa12.23□□□□□ -0.45
ZNF540-205ENST00000587220 SMIM10L2BP0DMW5 78 aa12.23□□□□□ -0.45
ZNF540-205ENST00000587220 GNAT1P11488 350 aa12.23□□□□□ -0.45
ZNF540-205ENST00000587220 THPOP40225 353 aa12.23□□□□□ -0.45
ZNF540-205ENST00000587220 NAPAP54920 295 aa12.23□□□□□ -0.45
ZNF540-205ENST00000587220 ZNF200P98182 395 aaPredicted RBP12.23□□□□□ -0.45
ZNF540-205ENST00000587220 RBL2Q08999 1139 aa12.23□□□□□ -0.45
ZNF540-205ENST00000587220 MTMR1Q13613 665 aa12.23□□□□□ -0.45
ZNF540-205ENST00000587220 UBE2SQ16763 222 aa12.23□□□□□ -0.45
ZNF540-205ENST00000587220 UTP14CQ5TAP6 766 aaKnown RBP12.23□□□□□ -0.45
ZNF540-205ENST00000587220 CNKSR3Q6P9H4 555 aa12.23□□□□□ -0.45
ZNF540-205ENST00000587220 HERC6Q8IVU3 1022 aa12.23□□□□□ -0.45
ZNF540-205ENST00000587220 GPR20Q99678 358 aa12.23□□□□□ -0.45
ZNF540-205ENST00000587220 SENP7Q9BQF6 1050 aa12.23□□□□□ -0.45
ZNF540-205ENST00000587220 VCANP13611 3396 aa12.22□□□□□ -0.45
ZNF540-205ENST00000587220 GOLGA8AA7E2F4 631 aa12.22□□□□□ -0.45
ZNF540-205ENST00000587220 GOLGA8BA8MQT2 603 aa12.22□□□□□ -0.45
ZNF540-205ENST00000587220 TLL1O43897 1013 aa12.22□□□□□ -0.45
ZNF540-205ENST00000587220 SEMA3FQ13275 785 aa12.22□□□□□ -0.45
ZNF540-205ENST00000587220 IKBKEQ14164 716 aa12.22□□□□□ -0.45
ZNF540-205ENST00000587220 ADCK5Q3MIX3 580 aa12.22□□□□□ -0.45
ZNF540-205ENST00000587220 TSGA10IPQ3SY00 556 aa12.22□□□□□ -0.45
ZNF540-205ENST00000587220 ZNF618Q5T7W0 954 aa12.22□□□□□ -0.45
ZNF540-205ENST00000587220 SERINC5Q86VE9 423 aa12.22□□□□□ -0.45
ZNF540-205ENST00000587220 RASEFQ8IZ41 740 aa12.22□□□□□ -0.45
ZNF540-205ENST00000587220 GPRASP2Q96D09 838 aa12.22□□□□□ -0.45
ZNF540-205ENST00000587220 BCAS3Q9H6U6 928 aa12.22□□□□□ -0.45
ZNF540-205ENST00000587220 PKD2L1Q9P0L9 805 aa12.22□□□□□ -0.45
ZNF540-205ENST00000587220 PCDHA6Q9UN73 950 aa12.22□□□□□ -0.45
ZNF540-205ENST00000587220 PCDHA8Q9Y5H6 950 aa12.22□□□□□ -0.45
ZNF540-205ENST00000587220 CUL9Q8IWT3 2517 aa12.22□□□□□ -0.45
ZNF540-205ENST00000587220 CNTNAP5Q8WYK1 1306 aa12.21□□□□□ -0.45
ZNF540-205ENST00000587220 ABHD14A-ACY1A0A1B0GW23 586 aa12.21□□□□□ -0.45
ZNF540-205ENST00000587220 RSPH10B2B2RC85 870 aa12.21□□□□□ -0.45
ZNF540-205ENST00000587220 NBNO60934 754 aa12.21□□□□□ -0.45
ZNF540-205ENST00000587220 EFCAB14O75071 495 aa12.21□□□□□ -0.45
ZNF540-205ENST00000587220 RSPH10BP0C881 870 aa12.21□□□□□ -0.45
ZNF540-205ENST00000587220 TCF7P36402 384 aaPredicted RBP12.21□□□□□ -0.45
ZNF540-205ENST00000587220 ADCY7P51828 1080 aa12.21□□□□□ -0.45
ZNF540-205ENST00000587220 WDR5P61964 334 aaKnown RBP12.21□□□□□ -0.45
ZNF540-205ENST00000587220 EXOSC10Q01780 885 aaKnown RBP12.21□□□□□ -0.45
ZNF540-205ENST00000587220 CCDC85BQ15834 202 aaPredicted RBP12.21□□□□□ -0.45
ZNF540-205ENST00000587220 WWC2Q6AWC2 1192 aa12.21□□□□□ -0.45
ZNF540-205ENST00000587220 PPP1R18Q6NYC8 613 aa12.21□□□□□ -0.45
ZNF540-205ENST00000587220 TRIM50Q86XT4 487 aa12.21□□□□□ -0.45
ZNF540-205ENST00000587220 MICALL1Q8N3F8 863 aa12.21□□□□□ -0.45
ZNF540-205ENST00000587220 USP38Q8NB14 1042 aa12.21□□□□□ -0.45
ZNF540-205ENST00000587220 COL25A1Q9BXS0 654 aaPredicted RBP12.21□□□□□ -0.45
ZNF540-205ENST00000587220 CERS4Q9HA82 394 aa12.21□□□□□ -0.45
ZNF540-205ENST00000587220 BRPF3Q9ULD4 1205 aa12.21□□□□□ -0.45
ZNF540-205ENST00000587220 V9GY48 417 aaPredicted RBP12.21□□□□□ -0.45
ZNF540-205ENST00000587220 TRANK1O15050 2925 aa12.21□□□□□ -0.46
ZNF540-205ENST00000587220 MYO9BQ13459 2157 aa12.2□□□□□ -0.46
ZNF540-205ENST00000587220 TET1Q8NFU7 2136 aa12.2□□□□□ -0.46
ZNF540-205ENST00000587220 CCDC196A0A1B0GTZ2 297 aa12.2□□□□□ -0.46
ZNF540-205ENST00000587220 hCG_1984214I3L0E3 225 aa12.2□□□□□ -0.46
ZNF540-205ENST00000587220 TREHO43280 583 aa12.2□□□□□ -0.46
ZNF540-205ENST00000587220 GTPBP6O43824 516 aaPredicted RBP12.2□□□□□ -0.46
ZNF540-205ENST00000587220 LGR5O75473 907 aa12.2□□□□□ -0.46
ZNF540-205ENST00000587220 REC8O95072 547 aa12.2□□□□□ -0.46
ZNF540-205ENST00000587220 CXCL10P02778 98 aa12.2□□□□□ -0.46
ZNF540-205ENST00000587220 CTSHP09668 335 aa12.2□□□□□ -0.46
ZNF540-205ENST00000587220 ITGB5P18084 799 aa12.2□□□□□ -0.46
ZNF540-205ENST00000587220 ARHGAP4P98171 946 aa12.2□□□□□ -0.46
ZNF540-205ENST00000587220 ADGRE1Q14246 886 aa12.2□□□□□ -0.46
ZNF540-205ENST00000587220 HIC1Q14526 733 aa12.2□□□□□ -0.46
ZNF540-205ENST00000587220 TRIM71Q2Q1W2 868 aaKnown RBP12.2□□□□□ -0.46
ZNF540-205ENST00000587220 BLOC1S2Q6QNY1 142 aa12.2□□□□□ -0.46
ZNF540-205ENST00000587220 ZNF713Q8N859 430 aaPredicted RBP12.2□□□□□ -0.46
ZNF540-205ENST00000587220 ARNTL2Q8WYA1 636 aa12.2□□□□□ -0.46
ZNF540-205ENST00000587220 GLG1Q92896 1179 aa12.2□□□□□ -0.46
ZNF540-205ENST00000587220 WNT8BQ93098 351 aa12.2□□□□□ -0.46
ZNF540-205ENST00000587220 JAKMIP1Q96N16 626 aaKnown RBP12.2□□□□□ -0.46
ZNF540-205ENST00000587220 TSPYL2Q9H2G4 693 aaPredicted RBP12.2□□□□□ -0.46
ZNF540-205ENST00000587220 RNPEPQ9H4A4 650 aa12.2□□□□□ -0.46
ZNF540-205ENST00000587220 RIC8AQ9NPQ8 531 aa12.2□□□□□ -0.46
ZNF540-205ENST00000587220 SETD4Q9NVD3 440 aa12.2□□□□□ -0.46
ZNF540-205ENST00000587220 SMCO2A6NFE2 343 aa12.19□□□□□ -0.46
ZNF540-205ENST00000587220 MAFGO15525 162 aa12.19□□□□□ -0.46
ZNF540-205ENST00000587220 ATP9AO75110 1047 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms