RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 UIMC1Q96RL1 719 aa15.4■□□□□ 0.06
VMP1-203ENST00000586245 RIT2Q99578 217 aa15.4■□□□□ 0.06
VMP1-203ENST00000586245 TEKT3Q9BXF9 490 aa15.4■□□□□ 0.06
VMP1-203ENST00000586245 CFAP45Q9UL16 551 aa15.4■□□□□ 0.06
VMP1-203ENST00000586245 GNEQ9Y223 722 aaKnown RBP15.4■□□□□ 0.06
VMP1-203ENST00000586245 DYNC1LI2O43237 492 aaPredicted RBP15.39■□□□□ 0.05
VMP1-203ENST00000586245 ADCY6O43306 1168 aa15.39■□□□□ 0.05
VMP1-203ENST00000586245 SORBS3O60504 671 aa15.39■□□□□ 0.05
VMP1-203ENST00000586245 GAS7O60861 476 aa15.39■□□□□ 0.05
VMP1-203ENST00000586245 NCLP19338 710 aaKnown RBP15.39■□□□□ 0.05
VMP1-203ENST00000586245 CEBPZQ03701 1054 aaKnown RBP15.39■□□□□ 0.05
VMP1-203ENST00000586245 ITGB3BPQ13352 177 aaPredicted RBP15.39■□□□□ 0.05
VMP1-203ENST00000586245 TMEM63BQ5T3F8 832 aa15.39■□□□□ 0.05
VMP1-203ENST00000586245 METTL7BQ6UX53 244 aa15.39■□□□□ 0.05
VMP1-203ENST00000586245 HAS1Q92839 578 aa15.39■□□□□ 0.05
VMP1-203ENST00000586245 LENG1Q96BZ8 264 aaPredicted RBP15.39■□□□□ 0.05
VMP1-203ENST00000586245 USP28Q96RU2 1077 aa15.39■□□□□ 0.05
VMP1-203ENST00000586245 TMEM60Q9H2L4 133 aa15.39■□□□□ 0.05
VMP1-203ENST00000586245 JPH1Q9HDC5 661 aaPredicted RBP15.39■□□□□ 0.05
VMP1-203ENST00000586245 XPNPEP3Q9NQH7 507 aa15.39■□□□□ 0.05
VMP1-203ENST00000586245 POLR3EQ9NVU0 708 aa15.39■□□□□ 0.05
VMP1-203ENST00000586245 TFIP11Q9UBB9 837 aaKnown RBP15.39■□□□□ 0.05
VMP1-203ENST00000586245 CLIC4Q9Y696 253 aa15.39■□□□□ 0.05
VMP1-203ENST00000586245 HTTP42858 3142 aa15.39■□□□□ 0.05
VMP1-203ENST00000586245 DDX39AO00148 427 aaKnown RBP15.38■□□□□ 0.05
VMP1-203ENST00000586245 NOP56O00567 594 aaKnown RBP15.38■□□□□ 0.05
VMP1-203ENST00000586245 FARP2O94887 1054 aaPredicted RBP15.38■□□□□ 0.05
VMP1-203ENST00000586245 TXKP42681 527 aa15.38■□□□□ 0.05
VMP1-203ENST00000586245 KRT85P78386 507 aa15.38■□□□□ 0.05
VMP1-203ENST00000586245 ATP2C1P98194 919 aaPredicted RBP15.38■□□□□ 0.05
VMP1-203ENST00000586245 KRT76Q01546 638 aa15.38■□□□□ 0.05
VMP1-203ENST00000586245 SP4Q02446 784 aa15.38■□□□□ 0.05
VMP1-203ENST00000586245 DNM1Q05193 864 aaKnown RBP15.38■□□□□ 0.05
VMP1-203ENST00000586245 ARHGAP1Q07960 439 aa15.38■□□□□ 0.05
VMP1-203ENST00000586245 STK38Q15208 465 aa15.38■□□□□ 0.05
VMP1-203ENST00000586245 TMEM266Q2M3C6 531 aa15.38■□□□□ 0.05
VMP1-203ENST00000586245 BRDTQ58F21 947 aaPredicted RBP15.38■□□□□ 0.05
VMP1-203ENST00000586245 EMID1Q96A84 441 aaPredicted RBP15.38■□□□□ 0.05
VMP1-203ENST00000586245 SPATA33Q96N06 139 aa15.38■□□□□ 0.05
VMP1-203ENST00000586245 MTMR9Q96QG7 549 aa15.38■□□□□ 0.05
VMP1-203ENST00000586245 FTOQ9C0B1 505 aaKnown RBP eCLIP15.38■□□□□ 0.05
VMP1-203ENST00000586245 PAK6Q9NQU5 681 aaPredicted RBP15.38■□□□□ 0.05
VMP1-203ENST00000586245 SLC9A2Q9UBY0 812 aa15.38■□□□□ 0.05
VMP1-203ENST00000586245 PCDHA12Q9UN75 941 aa15.38■□□□□ 0.05
VMP1-203ENST00000586245 DHX15O43143 795 aaKnown RBP15.37■□□□□ 0.05
VMP1-203ENST00000586245 PSMD10O75832 226 aa15.37■□□□□ 0.05
VMP1-203ENST00000586245 PTGS1P23219 599 aa15.37■□□□□ 0.05
VMP1-203ENST00000586245 PRPHP41219 470 aa15.37■□□□□ 0.05
VMP1-203ENST00000586245 NASPP49321 788 aaPredicted RBP15.37■□□□□ 0.05
VMP1-203ENST00000586245 GJA9P57773 515 aa15.37■□□□□ 0.05
VMP1-203ENST00000586245 ARL6IP4Q66PJ3 421 aaKnown RBP15.37■□□□□ 0.05
VMP1-203ENST00000586245 LHX8Q68G74 356 aa15.37■□□□□ 0.05
VMP1-203ENST00000586245 DTHD1Q6ZMT9 781 aa15.37■□□□□ 0.05
VMP1-203ENST00000586245 C4orf32Q8N8J7 132 aa15.37■□□□□ 0.05
VMP1-203ENST00000586245 PPTC7Q8NI37 304 aa15.37■□□□□ 0.05
VMP1-203ENST00000586245 GJA10Q969M2 543 aa15.37■□□□□ 0.05
VMP1-203ENST00000586245 DEFB118Q96PH6 123 aa15.37■□□□□ 0.05
VMP1-203ENST00000586245 TMEM106CQ9BVX2 250 aa15.37■□□□□ 0.05
VMP1-203ENST00000586245 BCAS3Q9H6U6 928 aa15.37■□□□□ 0.05
VMP1-203ENST00000586245 TTC12Q9H892 705 aaPredicted RBP15.37■□□□□ 0.05
VMP1-203ENST00000586245 SYNRGQ9UMZ2 1314 aa15.37■□□□□ 0.05
VMP1-203ENST00000586245 ZEB2O60315 1214 aa15.36■□□□□ 0.05
VMP1-203ENST00000586245 YEATS4O95619 227 aa15.36■□□□□ 0.05
VMP1-203ENST00000586245 PGK1P00558 417 aa15.36■□□□□ 0.05
VMP1-203ENST00000586245 MYCNP04198 464 aaPredicted RBP15.36■□□□□ 0.05
VMP1-203ENST00000586245 GJB1P08034 283 aa15.36■□□□□ 0.05
VMP1-203ENST00000586245 C6orf222P0C671 652 aaPredicted RBP15.36■□□□□ 0.05
VMP1-203ENST00000586245 CPT1AP50416 773 aa15.36■□□□□ 0.05
VMP1-203ENST00000586245 SLC39A14Q15043 492 aa15.36■□□□□ 0.05
VMP1-203ENST00000586245 PTPAQ15257 358 aa15.36■□□□□ 0.05
VMP1-203ENST00000586245 COL13A1Q5TAT6 717 aaPredicted RBP15.36■□□□□ 0.05
VMP1-203ENST00000586245 ZNF746Q6NUN9 644 aaPredicted RBP15.36■□□□□ 0.05
VMP1-203ENST00000586245 RNF180Q86T96 592 aa15.36■□□□□ 0.05
VMP1-203ENST00000586245 AFG1LQ8WV93 481 aa15.36■□□□□ 0.05
VMP1-203ENST00000586245 RAB34Q9BZG1 259 aa15.36■□□□□ 0.05
VMP1-203ENST00000586245 UPF3AQ9H1J1 476 aaKnown RBP15.36■□□□□ 0.05
VMP1-203ENST00000586245 ELP1O95163 1332 aa15.36■□□□□ 0.05
VMP1-203ENST00000586245 MYH15Q9Y2K3 1946 aa15.35■□□□□ 0.05
VMP1-203ENST00000586245 WDR64B1ANS9 1081 aa15.35■□□□□ 0.05
VMP1-203ENST00000586245 CHMP2AO43633 222 aa15.35■□□□□ 0.05
VMP1-203ENST00000586245 TECP42680 631 aa15.35■□□□□ 0.05
VMP1-203ENST00000586245 JAK3P52333 1124 aa15.35■□□□□ 0.05
VMP1-203ENST00000586245 ACTR2P61160 394 aa15.35■□□□□ 0.05
VMP1-203ENST00000586245 PPP2R5CQ13362 524 aa15.35■□□□□ 0.05
VMP1-203ENST00000586245 FSCN1Q16658 493 aaKnown RBP15.35■□□□□ 0.05
VMP1-203ENST00000586245 HSDL1Q3SXM5 330 aa15.35■□□□□ 0.05
VMP1-203ENST00000586245 NCAPH2Q6IBW4 605 aa15.35■□□□□ 0.05
VMP1-203ENST00000586245 MIER3Q7Z3K6 550 aa15.35■□□□□ 0.05
VMP1-203ENST00000586245 SMAP1Q8IYB5 467 aaPredicted RBP15.35■□□□□ 0.05
VMP1-203ENST00000586245 LINC00301Q8NCQ3 95 aa15.35■□□□□ 0.05
VMP1-203ENST00000586245 ARRDC4Q8NCT1 418 aa15.35■□□□□ 0.05
VMP1-203ENST00000586245 KCNG4Q8TDN1 519 aa15.35■□□□□ 0.05
VMP1-203ENST00000586245 SEPT1Q8WYJ6 367 aa15.35■□□□□ 0.05
VMP1-203ENST00000586245 UNC45AQ9H3U1 944 aa15.35■□□□□ 0.05
VMP1-203ENST00000586245 SAMM50Q9Y512 469 aa15.35■□□□□ 0.05
VMP1-203ENST00000586245 A6NJR5 290 aa15.34■□□□□ 0.05
VMP1-203ENST00000586245 SPTLC2O15270 562 aa15.34■□□□□ 0.05
VMP1-203ENST00000586245 ADAMTS4O75173 837 aa15.34■□□□□ 0.05
VMP1-203ENST00000586245 SGPL1O95470 568 aa15.34■□□□□ 0.05
VMP1-203ENST00000586245 TFRCP02786 760 aaKnown RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms