RNA–Protein interactions for RNA: ENST00000586134.5

ZNF540-203, Transcript of zinc finger protein 540, humanhuman

TSL 5

Gene ZNF540, Length 2,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-203ENST00000586134 TMEM62Q0P6H9 643 aa10.94□□□□□ -0.66
ZNF540-203ENST00000586134 PTGISQ16647 500 aa10.94□□□□□ -0.66
ZNF540-203ENST00000586134 SUPT20HL1Q3ZLR7 823 aa10.94□□□□□ -0.66
ZNF540-203ENST00000586134 LDLRAD1Q5T700 205 aa10.94□□□□□ -0.66
ZNF540-203ENST00000586134 FKBP1CQ5VVH2 108 aa10.94□□□□□ -0.66
ZNF540-203ENST00000586134 NLRP14Q86W24 1093 aa10.94□□□□□ -0.66
ZNF540-203ENST00000586134 LRRC43Q8N309 656 aa10.94□□□□□ -0.66
ZNF540-203ENST00000586134 MYCBPAPQ8TBZ2 947 aa10.94□□□□□ -0.66
ZNF540-203ENST00000586134 CCT8L2Q96SF2 557 aa10.94□□□□□ -0.66
ZNF540-203ENST00000586134 DEFB129Q9H1M3 183 aa10.94□□□□□ -0.66
ZNF540-203ENST00000586134 RETREG1Q9H6L5 497 aa10.94□□□□□ -0.66
ZNF540-203ENST00000586134 ZSWIM4Q9H7M6 989 aa10.94□□□□□ -0.66
ZNF540-203ENST00000586134 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.94□□□□□ -0.66
ZNF540-203ENST00000586134 PDS5AQ29RF7 1337 aaKnown RBP10.94□□□□□ -0.66
ZNF540-203ENST00000586134 A0A1B0GVL5 298 aa10.93□□□□□ -0.66
ZNF540-203ENST00000586134 DPPA5A6NC42 116 aa10.93□□□□□ -0.66
ZNF540-203ENST00000586134 N4BP3O15049 544 aa10.93□□□□□ -0.66
ZNF540-203ENST00000586134 PPP1R37O75864 691 aa10.93□□□□□ -0.66
ZNF540-203ENST00000586134 FLOT1O75955 427 aa10.93□□□□□ -0.66
ZNF540-203ENST00000586134 TROVE2P10155 538 aaKnown RBP eCLIP10.93□□□□□ -0.66
ZNF540-203ENST00000586134 TRIM21P19474 475 aaKnown RBP10.93□□□□□ -0.66
ZNF540-203ENST00000586134 SPDYE2Q495Y8 402 aa10.93□□□□□ -0.66
ZNF540-203ENST00000586134 GALNT17Q6IS24 598 aa10.93□□□□□ -0.66
ZNF540-203ENST00000586134 Q6ZUG5 572 aa10.93□□□□□ -0.66
ZNF540-203ENST00000586134 NCCRP1Q6ZVX7 275 aaPredicted RBP10.93□□□□□ -0.66
ZNF540-203ENST00000586134 TMEM139Q8IV31 216 aa10.93□□□□□ -0.66
ZNF540-203ENST00000586134 C1orf131Q8NDD1 294 aaKnown RBP10.93□□□□□ -0.66
ZNF540-203ENST00000586134 ZNF653Q96CK0 615 aa10.93□□□□□ -0.66
ZNF540-203ENST00000586134 PRMT6Q96LA8 375 aaPredicted RBP10.93□□□□□ -0.66
ZNF540-203ENST00000586134 NAP1L3Q99457 506 aaPredicted RBP10.93□□□□□ -0.66
ZNF540-203ENST00000586134 MEIS3Q99687 375 aa10.93□□□□□ -0.66
ZNF540-203ENST00000586134 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.93□□□□□ -0.66
ZNF540-203ENST00000586134 PREBQ9HCU5 417 aa10.93□□□□□ -0.66
ZNF540-203ENST00000586134 CROTQ9UKG9 612 aa10.93□□□□□ -0.66
ZNF540-203ENST00000586134 TTF2Q9UNY4 1162 aaKnown RBP10.93□□□□□ -0.66
ZNF540-203ENST00000586134 SLC4A7Q9Y6M7 1214 aa10.93□□□□□ -0.66
ZNF540-203ENST00000586134 CASP8AP2Q9UKL3 1982 aa10.93□□□□□ -0.66
ZNF540-203ENST00000586134 OTOFQ9HC10 1997 aa10.93□□□□□ -0.66
ZNF540-203ENST00000586134 GOLGA6L10A0A0M3HER8 536 aa10.92□□□□□ -0.66
ZNF540-203ENST00000586134 GSTA2P09210 222 aa10.92□□□□□ -0.66
ZNF540-203ENST00000586134 NEK2P51955 445 aa10.92□□□□□ -0.66
ZNF540-203ENST00000586134 KIF23Q02241 960 aaPredicted RBP10.92□□□□□ -0.66
ZNF540-203ENST00000586134 KIF5AQ12840 1032 aa10.92□□□□□ -0.66
ZNF540-203ENST00000586134 ZNF394Q53GI3 561 aa10.92□□□□□ -0.66
ZNF540-203ENST00000586134 VCXQ9H320 206 aa10.92□□□□□ -0.66
ZNF540-203ENST00000586134 CTNNAL1Q9UBT7 734 aa10.92□□□□□ -0.66
ZNF540-203ENST00000586134 SALL1Q9NSC2 1324 aa10.92□□□□□ -0.66
ZNF540-203ENST00000586134 SSC5DA1L4H1 1573 aa10.92□□□□□ -0.66
ZNF540-203ENST00000586134 VPS37CA5D8V6 355 aaPredicted RBP10.92□□□□□ -0.66
ZNF540-203ENST00000586134 DNM1LO00429 736 aa10.92□□□□□ -0.66
ZNF540-203ENST00000586134 IKBKBO14920 756 aa10.92□□□□□ -0.66
ZNF540-203ENST00000586134 ALOX15P16050 662 aaPredicted RBP10.92□□□□□ -0.66
ZNF540-203ENST00000586134 GRM1Q13255 1194 aa10.92□□□□□ -0.66
ZNF540-203ENST00000586134 HHIPL2Q6UWX4 724 aa10.92□□□□□ -0.66
ZNF540-203ENST00000586134 ERICH1Q86X53 443 aa10.92□□□□□ -0.66
ZNF540-203ENST00000586134 ARHGAP18Q8N392 663 aa10.92□□□□□ -0.66
ZNF540-203ENST00000586134 NEK9Q8TD19 979 aa10.92□□□□□ -0.66
ZNF540-203ENST00000586134 RIN2Q8WYP3 895 aaPredicted RBP10.92□□□□□ -0.66
ZNF540-203ENST00000586134 ZDHHC15Q96MV8 337 aa10.92□□□□□ -0.66
ZNF540-203ENST00000586134 NDNQ99608 321 aa10.92□□□□□ -0.66
ZNF540-203ENST00000586134 TCHPQ9BT92 498 aa10.92□□□□□ -0.66
ZNF540-203ENST00000586134 CFHR5Q9BXR6 569 aa10.92□□□□□ -0.66
ZNF540-203ENST00000586134 OXCT2Q9BYC2 517 aaPredicted RBP10.92□□□□□ -0.66
ZNF540-203ENST00000586134 ZNF148Q9UQR1 794 aa10.92□□□□□ -0.66
ZNF540-203ENST00000586134 GNAI2P04899 355 aa10.91□□□□□ -0.66
ZNF540-203ENST00000586134 IFIT2P09913 472 aaKnown RBP10.91□□□□□ -0.66
ZNF540-203ENST00000586134 TOP1P11387 765 aaKnown RBP10.91□□□□□ -0.66
ZNF540-203ENST00000586134 ABL2P42684 1182 aa10.91□□□□□ -0.66
ZNF540-203ENST00000586134 CRKP46108 304 aa10.91□□□□□ -0.66
ZNF540-203ENST00000586134 TM4SF4P48230 202 aa10.91□□□□□ -0.66
ZNF540-203ENST00000586134 TNNI2P48788 182 aa10.91□□□□□ -0.66
ZNF540-203ENST00000586134 BCAMP50895 628 aa10.91□□□□□ -0.66
ZNF540-203ENST00000586134 OXCT1P55809 520 aa10.91□□□□□ -0.66
ZNF540-203ENST00000586134 AKAP17AQ02040 695 aaKnown RBP10.91□□□□□ -0.66
ZNF540-203ENST00000586134 PDCLQ13371 301 aa10.91□□□□□ -0.66
ZNF540-203ENST00000586134 ZNF268Q14587 947 aaPredicted RBP10.91□□□□□ -0.66
ZNF540-203ENST00000586134 IFI16Q16666 785 aaKnown RBP10.91□□□□□ -0.66
ZNF540-203ENST00000586134 ZMYM1Q5SVZ6 1142 aa10.91□□□□□ -0.66
ZNF540-203ENST00000586134 WDR78Q5VTH9 848 aa10.91□□□□□ -0.66
ZNF540-203ENST00000586134 PPP4R3AQ6IN85 833 aa10.91□□□□□ -0.66
ZNF540-203ENST00000586134 ANKRD13BQ86YJ7 626 aa10.91□□□□□ -0.66
ZNF540-203ENST00000586134 OSBPL7Q9BZF2 842 aa10.91□□□□□ -0.66
ZNF540-203ENST00000586134 FAM192AQ9GZU8 254 aa10.91□□□□□ -0.66
ZNF540-203ENST00000586134 QPCTLQ9NXS2 382 aa10.91□□□□□ -0.66
ZNF540-203ENST00000586134 ZNF70Q9UC06 446 aaPredicted RBP10.91□□□□□ -0.66
ZNF540-203ENST00000586134 L3MBTL1Q9Y468 752 aa10.91□□□□□ -0.66
ZNF540-203ENST00000586134 MYH2Q9UKX2 1941 aa10.91□□□□□ -0.66
ZNF540-203ENST00000586134 DIAPH2O60879 1101 aa10.91□□□□□ -0.66
ZNF540-203ENST00000586134 CAPN15O75808 1086 aa10.91□□□□□ -0.66
ZNF540-203ENST00000586134 SMARCA1P28370 1054 aa10.91□□□□□ -0.66
ZNF540-203ENST00000586134 USP11P51784 963 aa10.91□□□□□ -0.66
ZNF540-203ENST00000586134 FANCCQ00597 558 aa10.91□□□□□ -0.66
ZNF540-203ENST00000586134 FOXD4Q12950 439 aaPredicted RBP10.91□□□□□ -0.66
ZNF540-203ENST00000586134 FAM83AQ86UY5 434 aa10.91□□□□□ -0.66
ZNF540-203ENST00000586134 VSTM4Q8IW00 320 aa10.91□□□□□ -0.66
ZNF540-203ENST00000586134 RPAP2Q8IXW5 612 aaPredicted RBP10.91□□□□□ -0.66
ZNF540-203ENST00000586134 KIFAP3Q92845 792 aa10.91□□□□□ -0.66
ZNF540-203ENST00000586134 NAF1Q96HR8 494 aaKnown RBP10.91□□□□□ -0.66
ZNF540-203ENST00000586134 CSRNP1Q96S65 589 aa10.91□□□□□ -0.66
ZNF540-203ENST00000586134 SELENOOQ9BVL4 669 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms