RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 ZFP91Q96JP5 570 aaPredicted RBP26.37■■□□□ 1.81
LSM7-202ENST00000585395 ALG1Q9BT22 464 aa26.37■■□□□ 1.81
LSM7-202ENST00000585395 SEZ6LQ9BYH1 1024 aa26.37■■□□□ 1.81
LSM7-202ENST00000585395 MYH7BA7E2Y1 1941 aa26.37■■□□□ 1.81
LSM7-202ENST00000585395 PURAQ00577 322 aaKnown RBP26.36■■□□□ 1.81
LSM7-202ENST00000585395 FAAP100Q0VG06 881 aa26.36■■□□□ 1.81
LSM7-202ENST00000585395 UBE2SQ16763 222 aa26.36■■□□□ 1.81
LSM7-202ENST00000585395 FAM47CQ5HY64 1035 aa26.36■■□□□ 1.81
LSM7-202ENST00000585395 CCDC62Q6P9F0 684 aa26.36■■□□□ 1.81
LSM7-202ENST00000585395 DHX37Q8IY37 1157 aaKnown RBP26.36■■□□□ 1.81
LSM7-202ENST00000585395 GAS2L1Q99501 681 aaPredicted RBP26.36■■□□□ 1.81
LSM7-202ENST00000585395 BRMS1Q9HCU9 246 aa26.36■■□□□ 1.81
LSM7-202ENST00000585395 PCDHA6Q9UN73 950 aa26.36■■□□□ 1.81
LSM7-202ENST00000585395 PCDHA8Q9Y5H6 950 aa26.36■■□□□ 1.81
LSM7-202ENST00000585395 FRMPD4Q14CM0 1322 aa26.36■■□□□ 1.81
LSM7-202ENST00000585395 CDK7P50613 346 aa26.35■■□□□ 1.81
LSM7-202ENST00000585395 AFG1LQ8WV93 481 aa26.35■■□□□ 1.81
LSM7-202ENST00000585395 DDX41Q9UJV9 622 aaKnown RBP26.35■■□□□ 1.81
LSM7-202ENST00000585395 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.35■■□□□ 1.81
LSM7-202ENST00000585395 A6NJR5 290 aa26.34■■□□□ 1.81
LSM7-202ENST00000585395 SORBS3O60504 671 aa26.34■■□□□ 1.81
LSM7-202ENST00000585395 PLA2G5P39877 138 aa26.34■■□□□ 1.81
LSM7-202ENST00000585395 ARHGAP1Q07960 439 aa26.34■■□□□ 1.81
LSM7-202ENST00000585395 LAMC2Q13753 1193 aa26.34■■□□□ 1.81
LSM7-202ENST00000585395 ASB2Q96Q27 587 aa26.34■■□□□ 1.81
LSM7-202ENST00000585395 PCDHA4Q9UN74 947 aa26.34■■□□□ 1.81
LSM7-202ENST00000585395 CHD9Q3L8U1 2897 aa26.33■■□□□ 1.81
LSM7-202ENST00000585395 MMP3P08254 477 aa26.33■■□□□ 1.81
LSM7-202ENST00000585395 PCNX4Q63HM2 1172 aa26.33■■□□□ 1.81
LSM7-202ENST00000585395 FAM126BQ8IXS8 530 aa26.33■■□□□ 1.81
LSM7-202ENST00000585395 ANO3Q9BYT9 981 aa26.33■■□□□ 1.81
LSM7-202ENST00000585395 MLXIPQ9HAP2 919 aa26.33■■□□□ 1.81
LSM7-202ENST00000585395 RTEL1Q9NZ71 1219 aa26.33■■□□□ 1.81
LSM7-202ENST00000585395 THEGQ9P2T0 379 aa26.33■■□□□ 1.81
LSM7-202ENST00000585395 RAPGEFL1Q9UHV5 662 aa26.33■■□□□ 1.81
LSM7-202ENST00000585395 JAK2O60674 1132 aa26.32■■□□□ 1.8
LSM7-202ENST00000585395 CD2BP2O95400 341 aaKnown RBP26.32■■□□□ 1.8
LSM7-202ENST00000585395 GGPS1O95749 300 aa26.32■■□□□ 1.8
LSM7-202ENST00000585395 CLK2P49760 499 aaKnown RBP26.32■■□□□ 1.8
LSM7-202ENST00000585395 ST3GAL1Q11201 340 aa26.32■■□□□ 1.8
LSM7-202ENST00000585395 DGKDQ16760 1214 aa26.32■■□□□ 1.8
LSM7-202ENST00000585395 HSCBQ8IWL3 235 aa26.32■■□□□ 1.8
LSM7-202ENST00000585395 BLIDQ8IZY5 108 aa26.32■■□□□ 1.8
LSM7-202ENST00000585395 DAGLBQ8NCG7 672 aa26.32■■□□□ 1.8
LSM7-202ENST00000585395 PPP1R12CQ9BZL4 782 aa26.32■■□□□ 1.8
LSM7-202ENST00000585395 TGFB3P10600 412 aa26.31■■□□□ 1.8
LSM7-202ENST00000585395 FDPSP14324 419 aaKnown RBP26.31■■□□□ 1.8
LSM7-202ENST00000585395 JAKMIP3Q5VZ66 844 aa26.31■■□□□ 1.8
LSM7-202ENST00000585395 NLRX1Q86UT6 975 aa26.31■■□□□ 1.8
LSM7-202ENST00000585395 SLC43A3Q8NBI5 491 aa26.31■■□□□ 1.8
LSM7-202ENST00000585395 ADAMTS19Q8TE59 1207 aa26.31■■□□□ 1.8
LSM7-202ENST00000585395 SNX21Q969T3 373 aa26.31■■□□□ 1.8
LSM7-202ENST00000585395 SPATA33Q96N06 139 aa26.31■■□□□ 1.8
LSM7-202ENST00000585395 RGS20O76081 388 aa26.3■■□□□ 1.8
LSM7-202ENST00000585395 TIMP1P01033 207 aa26.3■■□□□ 1.8
LSM7-202ENST00000585395 SAFBQ15424 915 aaKnown RBP eCLIP26.3■■□□□ 1.8
LSM7-202ENST00000585395 FAM122AQ96E09 287 aa26.3■■□□□ 1.8
LSM7-202ENST00000585395 CDHR1Q96JP9 859 aa26.3■■□□□ 1.8
LSM7-202ENST00000585395 AIFM3Q96NN9 605 aa26.3■■□□□ 1.8
LSM7-202ENST00000585395 PHF20Q9BVI0 1012 aa26.3■■□□□ 1.8
LSM7-202ENST00000585395 TBX21Q9UL17 535 aa26.3■■□□□ 1.8
LSM7-202ENST00000585395 K7ELQ4 463 aaPredicted RBP26.29■■□□□ 1.8
LSM7-202ENST00000585395 FIBPO43427 364 aa26.29■■□□□ 1.8
LSM7-202ENST00000585395 UBA1P22314 1058 aaKnown RBP26.29■■□□□ 1.8
LSM7-202ENST00000585395 MRPS5P82675 430 aaKnown RBP26.29■■□□□ 1.8
LSM7-202ENST00000585395 NBPF20Q3BBV1 942 aa26.29■■□□□ 1.8
LSM7-202ENST00000585395 CELF3Q5SZQ8 465 aaKnown RBP26.29■■□□□ 1.8
LSM7-202ENST00000585395 PPTC7Q8NI37 304 aa26.29■■□□□ 1.8
LSM7-202ENST00000585395 PPM1EQ8WY54 764 aa26.29■■□□□ 1.8
LSM7-202ENST00000585395 EMID1Q96A84 441 aaPredicted RBP26.29■■□□□ 1.8
LSM7-202ENST00000585395 C8orf76Q96K31 380 aa26.29■■□□□ 1.8
LSM7-202ENST00000585395 SMC3Q9UQE7 1217 aa26.29■■□□□ 1.8
LSM7-202ENST00000585395 NOD1Q9Y239 953 aa26.29■■□□□ 1.8
LSM7-202ENST00000585395 GRIN2DO15399 1336 aa26.29■■□□□ 1.8
LSM7-202ENST00000585395 SCN10AQ9Y5Y9 1956 aa26.28■■□□□ 1.8
LSM7-202ENST00000585395 NOP56O00567 594 aaKnown RBP26.28■■□□□ 1.8
LSM7-202ENST00000585395 B4GALT4O60513 344 aa26.28■■□□□ 1.8
LSM7-202ENST00000585395 SUPT20HL2P0C7V6 817 aa26.28■■□□□ 1.8
LSM7-202ENST00000585395 ZNF76P36508 570 aa26.28■■□□□ 1.8
LSM7-202ENST00000585395 SREBF1P36956 1147 aa26.28■■□□□ 1.8
LSM7-202ENST00000585395 MRPS9P82933 396 aaKnown RBP26.28■■□□□ 1.8
LSM7-202ENST00000585395 MFSD5Q6N075 450 aa26.28■■□□□ 1.8
LSM7-202ENST00000585395 KRT25Q7Z3Z0 450 aa26.28■■□□□ 1.8
LSM7-202ENST00000585395 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.28■■□□□ 1.88e-8■■□□□ 12
LSM7-202ENST00000585395 KATNAL1Q9BW62 490 aa26.28■■□□□ 1.8
LSM7-202ENST00000585395 TRPV6Q9H1D0 765 aa26.28■■□□□ 1.8
LSM7-202ENST00000585395 HIPK3Q9H422 1215 aa26.28■■□□□ 1.8
LSM7-202ENST00000585395 TMEM260Q9NX78 707 aa26.28■■□□□ 1.8
LSM7-202ENST00000585395 CD4P01730 458 aa26.27■■□□□ 1.8
LSM7-202ENST00000585395 KRT2P35908 639 aa26.27■■□□□ 1.8
LSM7-202ENST00000585395 PPIGQ13427 754 aaKnown RBP eCLIP26.27■■□□□ 1.87e-10■□□□□ 8.5
LSM7-202ENST00000585395 NEDD9Q14511 834 aa26.27■■□□□ 1.8
LSM7-202ENST00000585395 TMEM199Q8N511 208 aa26.27■■□□□ 1.8
LSM7-202ENST00000585395 INPP4AQ96PE3 977 aaPredicted RBP26.27■■□□□ 1.8
LSM7-202ENST00000585395 UHRF1Q96T88 793 aaPredicted RBP26.27■■□□□ 1.8
LSM7-202ENST00000585395 PBX4Q9BYU1 374 aa26.27■■□□□ 1.8
LSM7-202ENST00000585395 KCNJ14Q9UNX9 436 aa26.27■■□□□ 1.8
LSM7-202ENST00000585395 MYO9BQ13459 2157 aa26.26■■□□□ 1.79
LSM7-202ENST00000585395 CCDC194A0A1B0GVG4 234 aa26.26■■□□□ 1.79
LSM7-202ENST00000585395 MYSM1Q5VVJ2 828 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms