RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 CALML4Q96GE6 196 aa14.56□□□□□ -0.08
TRIM47-202ENST00000585333 CDK5RAP3Q96JB5 506 aa14.56□□□□□ -0.08
TRIM47-202ENST00000585333 FTOQ9C0B1 505 aaKnown RBP eCLIP14.56□□□□□ -0.08
TRIM47-202ENST00000585333 ARHGAP39Q9C0H5 1083 aa14.56□□□□□ -0.08
TRIM47-202ENST00000585333 TMEM60Q9H2L4 133 aa14.56□□□□□ -0.08
TRIM47-202ENST00000585333 MLXIPQ9HAP2 919 aa14.56□□□□□ -0.08
TRIM47-202ENST00000585333 SPC25Q9HBM1 224 aa14.56□□□□□ -0.08
TRIM47-202ENST00000585333 JPH1Q9HDC5 661 aaPredicted RBP14.56□□□□□ -0.08
TRIM47-202ENST00000585333 USP25Q9UHP3 1055 aa14.56□□□□□ -0.08
TRIM47-202ENST00000585333 ZHX1Q9UKY1 873 aaPredicted RBP14.56□□□□□ -0.08
TRIM47-202ENST00000585333 PCDHA7Q9UN72 937 aa14.56□□□□□ -0.08
TRIM47-202ENST00000585333 Q9Y3F1 56 aa14.56□□□□□ -0.08
TRIM47-202ENST00000585333 TRIM17Q9Y577 477 aa14.56□□□□□ -0.08
TRIM47-202ENST00000585333 LCTP09848 1927 aa14.56□□□□□ -0.08
TRIM47-202ENST00000585333 NOP56O00567 594 aaKnown RBP14.55□□□□□ -0.08
TRIM47-202ENST00000585333 EDIL3O43854 480 aa14.55□□□□□ -0.08
TRIM47-202ENST00000585333 PRPF40AO75400 957 aaKnown RBP14.55□□□□□ -0.08
TRIM47-202ENST00000585333 PSMD10O75832 226 aa14.55□□□□□ -0.08
TRIM47-202ENST00000585333 GH1P01241 217 aa14.55□□□□□ -0.08
TRIM47-202ENST00000585333 ARP10275 920 aa14.55□□□□□ -0.08
TRIM47-202ENST00000585333 TXNP10599 105 aaKnown RBP14.55□□□□□ -0.08
TRIM47-202ENST00000585333 AKR1A1P14550 325 aa14.55□□□□□ -0.08
TRIM47-202ENST00000585333 OTOP1Q7RTM1 612 aa14.55□□□□□ -0.08
TRIM47-202ENST00000585333 FBXO16Q8IX29 292 aaPredicted RBP14.55□□□□□ -0.08
TRIM47-202ENST00000585333 TNS4Q8IZW8 715 aa14.55□□□□□ -0.08
TRIM47-202ENST00000585333 CYP2W1Q8TAV3 490 aa14.55□□□□□ -0.08
TRIM47-202ENST00000585333 HAS1Q92839 578 aa14.55□□□□□ -0.08
TRIM47-202ENST00000585333 EMID1Q96A84 441 aaPredicted RBP14.55□□□□□ -0.08
TRIM47-202ENST00000585333 SLC9A2Q9UBY0 812 aa14.55□□□□□ -0.08
TRIM47-202ENST00000585333 HOOK1Q9UJC3 728 aaKnown RBP14.55□□□□□ -0.08
TRIM47-202ENST00000585333 WNT7AO00755 349 aa14.54□□□□□ -0.08
TRIM47-202ENST00000585333 RGS20O76081 388 aa14.54□□□□□ -0.08
TRIM47-202ENST00000585333 SNAI1O95863 264 aaPredicted RBP14.54□□□□□ -0.08
TRIM47-202ENST00000585333 HSPA1AP0DMV8 641 aaKnown RBP14.54□□□□□ -0.08
TRIM47-202ENST00000585333 HSPA1BP0DMV9 641 aaKnown RBP14.54□□□□□ -0.08
TRIM47-202ENST00000585333 KCNA2P16389 499 aa14.54□□□□□ -0.08
TRIM47-202ENST00000585333 CTGFP29279 349 aa14.54□□□□□ -0.08
TRIM47-202ENST00000585333 TECP42680 631 aa14.54□□□□□ -0.08
TRIM47-202ENST00000585333 TNFAIP2Q03169 654 aa14.54□□□□□ -0.08
TRIM47-202ENST00000585333 DUSP28Q4G0W2 176 aa14.54□□□□□ -0.08
TRIM47-202ENST00000585333 MIS18BP1Q6P0N0 1132 aa14.54□□□□□ -0.08
TRIM47-202ENST00000585333 EEPD1Q7L9B9 569 aa14.54□□□□□ -0.08
TRIM47-202ENST00000585333 MIER3Q7Z3K6 550 aa14.54□□□□□ -0.08
TRIM47-202ENST00000585333 DHX37Q8IY37 1157 aaKnown RBP14.54□□□□□ -0.08
TRIM47-202ENST00000585333 ATP6V0A1Q93050 837 aa14.54□□□□□ -0.08
TRIM47-202ENST00000585333 SYAP1Q96A49 352 aaPredicted RBP14.54□□□□□ -0.08
TRIM47-202ENST00000585333 CCSER1Q9C0I3 900 aa14.54□□□□□ -0.08
TRIM47-202ENST00000585333 CUEDC2Q9H467 287 aa14.54□□□□□ -0.08
TRIM47-202ENST00000585333 MAGEF1Q9HAY2 307 aa14.54□□□□□ -0.08
TRIM47-202ENST00000585333 GDPD2Q9HCC8 539 aa14.54□□□□□ -0.08
TRIM47-202ENST00000585333 TUFT1Q9NNX1 390 aa14.54□□□□□ -0.08
TRIM47-202ENST00000585333 DDX41Q9UJV9 622 aaKnown RBP14.54□□□□□ -0.08
TRIM47-202ENST00000585333 GABRQQ9UN88 632 aa14.54□□□□□ -0.08
TRIM47-202ENST00000585333 SAMM50Q9Y512 469 aa14.54□□□□□ -0.08
TRIM47-202ENST00000585333 LRRC37A2A6NM11 1700 aa14.54□□□□□ -0.08
TRIM47-202ENST00000585333 KIAA1217Q5T5P2 1943 aa14.53□□□□□ -0.08
TRIM47-202ENST00000585333 CAPN15O75808 1086 aa14.53□□□□□ -0.08
TRIM47-202ENST00000585333 ECM2O94769 699 aaPredicted RBP14.53□□□□□ -0.08
TRIM47-202ENST00000585333 GGPS1O95749 300 aa14.53□□□□□ -0.08
TRIM47-202ENST00000585333 IGHA2P01877 340 aa14.53□□□□□ -0.08
TRIM47-202ENST00000585333 PSAPP07602 524 aa14.53□□□□□ -0.08
TRIM47-202ENST00000585333 CAPN2P17655 700 aa14.53□□□□□ -0.08
TRIM47-202ENST00000585333 UBA1P22314 1058 aaKnown RBP14.53□□□□□ -0.08
TRIM47-202ENST00000585333 GRK4P32298 578 aa14.53□□□□□ -0.08
TRIM47-202ENST00000585333 EPHA7Q15375 998 aa14.53□□□□□ -0.08
TRIM47-202ENST00000585333 CELF3Q5SZQ8 465 aaKnown RBP14.53□□□□□ -0.08
TRIM47-202ENST00000585333 AXDND1Q5T1B0 1012 aaPredicted RBP14.53□□□□□ -0.08
TRIM47-202ENST00000585333 FAM160B1Q5W0V3 765 aa14.53□□□□□ -0.08
TRIM47-202ENST00000585333 RESP18Q5W5W9 173 aa14.53□□□□□ -0.08
TRIM47-202ENST00000585333 KANK3Q6NY19 840 aa14.53□□□□□ -0.08
TRIM47-202ENST00000585333 CCDC62Q6P9F0 684 aa14.53□□□□□ -0.08
TRIM47-202ENST00000585333 CTU1Q7Z7A3 348 aaKnown RBP14.53□□□□□ -0.08
TRIM47-202ENST00000585333 LRRC27Q9C0I9 530 aa14.53□□□□□ -0.08
TRIM47-202ENST00000585333 AP5M1Q9H0R1 490 aa14.53□□□□□ -0.08
TRIM47-202ENST00000585333 CSRNP2Q9H175 543 aa14.53□□□□□ -0.08
TRIM47-202ENST00000585333 PCDHA10Q9Y5I2 948 aa14.53□□□□□ -0.08
TRIM47-202ENST00000585333 SEPT4O43236 478 aa14.52□□□□□ -0.09
TRIM47-202ENST00000585333 HSPA8P11142 646 aaKnown RBP14.52□□□□□ -0.09
TRIM47-202ENST00000585333 CYBAP13498 195 aa14.52□□□□□ -0.09
TRIM47-202ENST00000585333 CYP2C19P33261 490 aa14.52□□□□□ -0.09
TRIM47-202ENST00000585333 CPT1AP50416 773 aa14.52□□□□□ -0.09
TRIM47-202ENST00000585333 SLC26A2P50443 739 aa14.52□□□□□ -0.09
TRIM47-202ENST00000585333 FAM160A1Q05DH4 1040 aa14.52□□□□□ -0.09
TRIM47-202ENST00000585333 CCDC144BQ3MJ40 725 aa14.52□□□□□ -0.09
TRIM47-202ENST00000585333 NCAPH2Q6IBW4 605 aa14.52□□□□□ -0.09
TRIM47-202ENST00000585333 TAPT1Q6NXT6 567 aa14.52□□□□□ -0.09
TRIM47-202ENST00000585333 CABP7Q86V35 215 aa14.52□□□□□ -0.09
TRIM47-202ENST00000585333 FSIP1Q8NA03 581 aa14.52□□□□□ -0.09
TRIM47-202ENST00000585333 IQUBQ8NA54 791 aa14.52□□□□□ -0.09
TRIM47-202ENST00000585333 SNX29Q8TEQ0 813 aa14.52□□□□□ -0.09
TRIM47-202ENST00000585333 SEPT1Q8WYJ6 367 aa14.52□□□□□ -0.09
TRIM47-202ENST00000585333 TRIB2Q92519 343 aa14.52□□□□□ -0.09
TRIM47-202ENST00000585333 POLR3CQ9BUI4 534 aaPredicted RBP14.52□□□□□ -0.09
TRIM47-202ENST00000585333 KATNBL1Q9H079 304 aa14.52□□□□□ -0.09
TRIM47-202ENST00000585333 AZI2Q9H6S1 392 aa14.52□□□□□ -0.09
TRIM47-202ENST00000585333 DISC1Q9NRI5 854 aa14.52□□□□□ -0.09
TRIM47-202ENST00000585333 STK17AQ9UEE5 414 aa14.52□□□□□ -0.09
TRIM47-202ENST00000585333 VAV3Q9UKW4 847 aa14.52□□□□□ -0.09
TRIM47-202ENST00000585333 PTPN22Q9Y2R2 807 aa14.52□□□□□ -0.09
TRIM47-202ENST00000585333 TCHHQ07283 1943 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms