RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 EPSTI1Q96J88 318 aa18.19■□□□□ 0.5
SS18-226ENST00000585241 STK24Q9Y6E0 443 aa18.19■□□□□ 0.5
SS18-226ENST00000585241 TRAK2O60296 914 aa18.18■□□□□ 0.5
SS18-226ENST00000585241 GNRH1P01148 92 aa18.18■□□□□ 0.5
SS18-226ENST00000585241 NDUFA8P51970 172 aa18.18■□□□□ 0.5
SS18-226ENST00000585241 CCDC62Q6P9F0 684 aa18.18■□□□□ 0.5
SS18-226ENST00000585241 ERO1AQ96HE7 468 aa18.18■□□□□ 0.5
SS18-226ENST00000585241 MMTAG2Q9BU76 263 aaKnown RBP18.18■□□□□ 0.5
SS18-226ENST00000585241 WBP1LQ9NX94 342 aa18.18■□□□□ 0.5
SS18-226ENST00000585241 LRWD1Q9UFC0 647 aa18.18■□□□□ 0.5
SS18-226ENST00000585241 PP2D1A8MPX8 630 aa18.17■□□□□ 0.5
SS18-226ENST00000585241 FKTNO75072 461 aa18.17■□□□□ 0.5
SS18-226ENST00000585241 CYP2B6P20813 491 aa18.17■□□□□ 0.5
SS18-226ENST00000585241 HYIQ5T013 277 aa18.17■□□□□ 0.5
SS18-226ENST00000585241 TAPT1Q6NXT6 567 aa18.17■□□□□ 0.5
SS18-226ENST00000585241 SEPT14Q6ZU15 432 aa18.17■□□□□ 0.5
SS18-226ENST00000585241 FBXO16Q8IX29 292 aaPredicted RBP18.17■□□□□ 0.5
SS18-226ENST00000585241 UNC45AQ9H3U1 944 aa18.17■□□□□ 0.5
SS18-226ENST00000585241 ABHD16BQ9H3Z7 469 aa18.17■□□□□ 0.5
SS18-226ENST00000585241 FLRT1Q9NZU1 646 aa18.17■□□□□ 0.5
SS18-226ENST00000585241 KCNH3Q9ULD8 1083 aa18.17■□□□□ 0.5
SS18-226ENST00000585241 NR1I2O75469 434 aa18.16■□□□□ 0.5
SS18-226ENST00000585241 UBA1P22314 1058 aaKnown RBP18.16■□□□□ 0.5
SS18-226ENST00000585241 TXLNAP40222 546 aa18.16■□□□□ 0.5
SS18-226ENST00000585241 UBA7P41226 1012 aa18.16■□□□□ 0.5
SS18-226ENST00000585241 SYKP43405 635 aa18.16■□□□□ 0.5
SS18-226ENST00000585241 FLT3LGP49771 235 aa18.16■□□□□ 0.5
SS18-226ENST00000585241 KRT76Q01546 638 aa18.16■□□□□ 0.5
SS18-226ENST00000585241 PRKCZQ05513 592 aa18.16■□□□□ 0.5
SS18-226ENST00000585241 CABP7Q86V35 215 aa18.16■□□□□ 0.5
SS18-226ENST00000585241 GIMAP8Q8ND71 665 aaPredicted RBP18.16■□□□□ 0.5
SS18-226ENST00000585241 RDM1Q8NG50 284 aa18.16■□□□□ 0.5
SS18-226ENST00000585241 CD99L2Q8TCZ2 262 aa18.16■□□□□ 0.5
SS18-226ENST00000585241 SCFD2Q8WU76 684 aa18.16■□□□□ 0.5
SS18-226ENST00000585241 ZNF296Q8WUU4 475 aaPredicted RBP18.16■□□□□ 0.5
SS18-226ENST00000585241 TIGD1Q96MW7 591 aa18.16■□□□□ 0.5
SS18-226ENST00000585241 UIMC1Q96RL1 719 aa18.16■□□□□ 0.5
SS18-226ENST00000585241 SDF4Q9BRK5 362 aa18.16■□□□□ 0.5
SS18-226ENST00000585241 PYM1Q9BRP8 204 aaKnown RBP18.16■□□□□ 0.5
SS18-226ENST00000585241 DDX19AQ9NUU7 478 aaKnown RBP18.16■□□□□ 0.5
SS18-226ENST00000585241 SRRDQ9UH36 339 aa18.16■□□□□ 0.5
SS18-226ENST00000585241 DDX41Q9UJV9 622 aaKnown RBP18.16■□□□□ 0.5
SS18-226ENST00000585241 GABRQQ9UN88 632 aa18.16■□□□□ 0.5
SS18-226ENST00000585241 A0A087X0B3 334 aa18.15■□□□□ 0.5
SS18-226ENST00000585241 EML1O00423 815 aa18.15■□□□□ 0.5
SS18-226ENST00000585241 ECM2O94769 699 aaPredicted RBP18.15■□□□□ 0.5
SS18-226ENST00000585241 ARIH2O95376 493 aa18.15■□□□□ 0.5
SS18-226ENST00000585241 HOXD10P28358 340 aa18.15■□□□□ 0.5
SS18-226ENST00000585241 CDC25AP30304 524 aa18.15■□□□□ 0.5
SS18-226ENST00000585241 SP2Q02086 613 aa18.15■□□□□ 0.5
SS18-226ENST00000585241 NEDD9Q14511 834 aa18.15■□□□□ 0.5
SS18-226ENST00000585241 EPHA7Q15375 998 aa18.15■□□□□ 0.5
SS18-226ENST00000585241 E2F4Q16254 413 aa18.15■□□□□ 0.5
SS18-226ENST00000585241 CCL14Q16627 93 aa18.15■□□□□ 0.5
SS18-226ENST00000585241 KRT79Q5XKE5 535 aa18.15■□□□□ 0.5
SS18-226ENST00000585241 HAUS3Q68CZ6 603 aa18.15■□□□□ 0.5
SS18-226ENST00000585241 ZNF746Q6NUN9 644 aaPredicted RBP18.15■□□□□ 0.5
SS18-226ENST00000585241 EEPD1Q7L9B9 569 aa18.15■□□□□ 0.5
SS18-226ENST00000585241 TRMT44Q8IYL2 757 aaKnown RBP18.15■□□□□ 0.5
SS18-226ENST00000585241 NEK9Q8TD19 979 aa18.15■□□□□ 0.5
SS18-226ENST00000585241 DACT1Q9NYF0 836 aa18.15■□□□□ 0.5
SS18-226ENST00000585241 USP25Q9UHP3 1055 aa18.15■□□□□ 0.5
SS18-226ENST00000585241 NRBP1Q9UHY1 535 aa18.15■□□□□ 0.5
SS18-226ENST00000585241 FARP2O94887 1054 aaPredicted RBP18.14■□□□□ 0.49
SS18-226ENST00000585241 ZNF202O95125 648 aa18.14■□□□□ 0.49
SS18-226ENST00000585241 CCNE2O96020 404 aa18.14■□□□□ 0.49
SS18-226ENST00000585241 MUTP22033 750 aa18.14■□□□□ 0.49
SS18-226ENST00000585241 SFNP31947 248 aa18.14■□□□□ 0.49
SS18-226ENST00000585241 JAK3P52333 1124 aa18.14■□□□□ 0.49
SS18-226ENST00000585241 ACVR2BQ13705 512 aa18.14■□□□□ 0.49
SS18-226ENST00000585241 TTLL4Q14679 1199 aa18.14■□□□□ 0.49
SS18-226ENST00000585241 ARHGEF6Q15052 776 aa18.14■□□□□ 0.49
SS18-226ENST00000585241 TPRNQ4KMQ1 711 aa18.14■□□□□ 0.49
SS18-226ENST00000585241 TMEM119Q4V9L6 283 aa18.14■□□□□ 0.49
SS18-226ENST00000585241 NCAPH2Q6IBW4 605 aa18.14■□□□□ 0.49
SS18-226ENST00000585241 SMAP1Q8IYB5 467 aaPredicted RBP18.14■□□□□ 0.49
SS18-226ENST00000585241 KCTD17Q8N5Z5 321 aa18.14■□□□□ 0.49
SS18-226ENST00000585241 ERMNQ8TAM6 284 aa18.14■□□□□ 0.49
SS18-226ENST00000585241 SNX29Q8TEQ0 813 aa18.14■□□□□ 0.49
SS18-226ENST00000585241 HSD17B14Q9BPX1 270 aa18.14■□□□□ 0.49
SS18-226ENST00000585241 BEGAINQ9BUH8 593 aa18.14■□□□□ 0.49
SS18-226ENST00000585241 POLR3CQ9BUI4 534 aaPredicted RBP18.14■□□□□ 0.49
SS18-226ENST00000585241 JPH1Q9HDC5 661 aaPredicted RBP18.14■□□□□ 0.49
SS18-226ENST00000585241 DISC1Q9NRI5 854 aa18.14■□□□□ 0.49
SS18-226ENST00000585241 PKD2L1Q9P0L9 805 aa18.14■□□□□ 0.49
SS18-226ENST00000585241 KDM3AQ9Y4C1 1321 aa18.14■□□□□ 0.49
SS18-226ENST00000585241 RPA1P27694 616 aa18.13■□□□□ 0.49
SS18-226ENST00000585241 PRMT2P55345 433 aa18.13■□□□□ 0.49
SS18-226ENST00000585241 GRB10Q13322 594 aa18.13■□□□□ 0.49
SS18-226ENST00000585241 KARSQ15046 597 aaKnown RBP18.13■□□□□ 0.49
SS18-226ENST00000585241 METTL7BQ6UX53 244 aa18.13■□□□□ 0.49
SS18-226ENST00000585241 ELOA2Q8IYF1 753 aaPredicted RBP18.13■□□□□ 0.49
SS18-226ENST00000585241 PNMA5Q96PV4 448 aa18.13■□□□□ 0.49
SS18-226ENST00000585241 EIF2AK1Q9BQI3 630 aaKnown RBP18.13■□□□□ 0.49
SS18-226ENST00000585241 TUFT1Q9NNX1 390 aa18.13■□□□□ 0.49
SS18-226ENST00000585241 PDGFCQ9NRA1 345 aa18.13■□□□□ 0.49
SS18-226ENST00000585241 SLC9A2Q9UBY0 812 aa18.13■□□□□ 0.49
SS18-226ENST00000585241 CCDC39Q9UFE4 941 aa18.13■□□□□ 0.49
SS18-226ENST00000585241 WDR64B1ANS9 1081 aa18.12■□□□□ 0.49
SS18-226ENST00000585241 DDX39AO00148 427 aaKnown RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms