RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 ASH2LQ9UBL3 628 aa4.78□□□□□ -1.64
VAPA-208ENST00000584796 ST6GALNAC2Q9UJ37 374 aa4.78□□□□□ -1.64
VAPA-208ENST00000584796 SCRIBQ14160 1630 aa4.78□□□□□ -1.64
VAPA-208ENST00000584796 GPR42O15529 346 aa4.77□□□□□ -1.65
VAPA-208ENST00000584796 MAFKO60675 156 aa4.77□□□□□ -1.65
VAPA-208ENST00000584796 GJB6O95452 261 aa4.77□□□□□ -1.65
VAPA-208ENST00000584796 FGRP09769 529 aa4.77□□□□□ -1.65
VAPA-208ENST00000584796 COL6A1P12109 1028 aa4.77□□□□□ -1.65
VAPA-208ENST00000584796 PPP2R2AP63151 447 aa4.77□□□□□ -1.65
VAPA-208ENST00000584796 ICAM4Q14773 271 aa4.77□□□□□ -1.65
VAPA-208ENST00000584796 PROSER1Q86XN7 944 aa4.77□□□□□ -1.65
VAPA-208ENST00000584796 KLHL36Q8N4N3 616 aa4.77□□□□□ -1.65
VAPA-208ENST00000584796 DNERQ8NFT8 737 aa4.77□□□□□ -1.65
VAPA-208ENST00000584796 IGDCC4Q8TDY8 1250 aa4.77□□□□□ -1.65
VAPA-208ENST00000584796 GPR27Q9NS67 375 aa4.77□□□□□ -1.65
VAPA-208ENST00000584796 TSC22D4Q9Y3Q8 395 aa4.77□□□□□ -1.65
VAPA-208ENST00000584796 A0A1W2PQU0 124 aa4.76□□□□□ -1.65
VAPA-208ENST00000584796 KRIT1O00522 736 aa4.76□□□□□ -1.65
VAPA-208ENST00000584796 PPP2CBP62714 309 aa4.76□□□□□ -1.65
VAPA-208ENST00000584796 PPP2CAP67775 309 aa4.76□□□□□ -1.65
VAPA-208ENST00000584796 KBTBD2Q8IY47 623 aa4.76□□□□□ -1.65
VAPA-208ENST00000584796 KCTD13Q8WZ19 329 aa4.76□□□□□ -1.65
VAPA-208ENST00000584796 PDGFDQ9GZP0 370 aaPredicted RBP4.76□□□□□ -1.65
VAPA-208ENST00000584796 ZNF408Q9H9D4 720 aa4.76□□□□□ -1.65
VAPA-208ENST00000584796 SLC6A20Q9NP91 592 aa4.76□□□□□ -1.65
VAPA-208ENST00000584796 FTSJ1Q9UET6 329 aa4.76□□□□□ -1.65
VAPA-208ENST00000584796 CROTQ9UKG9 612 aa4.76□□□□□ -1.65
VAPA-208ENST00000584796 NPEPPSL1A6NEC2 478 aa4.75□□□□□ -1.65
VAPA-208ENST00000584796 AGRPO00253 132 aa4.75□□□□□ -1.65
VAPA-208ENST00000584796 DLX3O60479 287 aa4.75□□□□□ -1.65
VAPA-208ENST00000584796 MSCO60682 206 aa4.75□□□□□ -1.65
VAPA-208ENST00000584796 ERCC5P28715 1186 aaPredicted RBP4.75□□□□□ -1.65
VAPA-208ENST00000584796 NFATC3Q12968 1075 aa4.75□□□□□ -1.65
VAPA-208ENST00000584796 RSPO2Q6UXX9 243 aaPredicted RBP4.75□□□□□ -1.65
VAPA-208ENST00000584796 TMC5Q6UXY8 1006 aa4.75□□□□□ -1.65
VAPA-208ENST00000584796 CIR1Q86X95 450 aaPredicted RBP4.75□□□□□ -1.65
VAPA-208ENST00000584796 TRIM48Q8IWZ4 208 aa4.75□□□□□ -1.65
VAPA-208ENST00000584796 DTX3Q8N9I9 347 aa4.75□□□□□ -1.65
VAPA-208ENST00000584796 PIP4K2CQ8TBX8 421 aa4.75□□□□□ -1.65
VAPA-208ENST00000584796 KISS1RQ969F8 398 aaPredicted RBP4.75□□□□□ -1.65
VAPA-208ENST00000584796 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.75□□□□□ -1.652e-9■■■■■ 32.7
VAPA-208ENST00000584796 KLC2Q9H0B6 622 aa4.75□□□□□ -1.65
VAPA-208ENST00000584796 MEGF9Q9H1U4 602 aa4.75□□□□□ -1.65
VAPA-208ENST00000584796 RBPJLQ9UBG7 517 aa4.75□□□□□ -1.65
VAPA-208ENST00000584796 ADAM29Q9UKF5 820 aa4.75□□□□□ -1.65
VAPA-208ENST00000584796 PATE3B3GLJ2 98 aa4.74□□□□□ -1.65
VAPA-208ENST00000584796 KLHL18O94889 574 aa4.74□□□□□ -1.65
VAPA-208ENST00000584796 CHGBP05060 677 aa4.74□□□□□ -1.65
VAPA-208ENST00000584796 TACR2P21452 398 aa4.74□□□□□ -1.65
VAPA-208ENST00000584796 SLFN13Q68D06 897 aa4.74□□□□□ -1.65
VAPA-208ENST00000584796 TRMT10BQ6PF06 316 aaKnown RBP4.74□□□□□ -1.65
VAPA-208ENST00000584796 ARHGEF18Q6ZSZ5 1173 aa4.74□□□□□ -1.65
VAPA-208ENST00000584796 SPRED1Q7Z699 444 aa4.74□□□□□ -1.65
VAPA-208ENST00000584796 SLC16A11Q8NCK7 471 aa4.74□□□□□ -1.65
VAPA-208ENST00000584796 SH3RF3Q8TEJ3 882 aaPredicted RBP4.74□□□□□ -1.65
VAPA-208ENST00000584796 WWC2-AS2Q96NR7 200 aa4.74□□□□□ -1.65
VAPA-208ENST00000584796 CDK5RAP1Q96SZ6 601 aaKnown RBP4.74□□□□□ -1.65
VAPA-208ENST00000584796 IER2Q9BTL4 223 aa4.74□□□□□ -1.65
VAPA-208ENST00000584796 PHF20Q9BVI0 1012 aa4.74□□□□□ -1.65
VAPA-208ENST00000584796 JAM3Q9BX67 310 aa4.74□□□□□ -1.65
VAPA-208ENST00000584796 BARX1Q9HBU1 254 aaPredicted RBP4.74□□□□□ -1.65
VAPA-208ENST00000584796 DLL4Q9NR61 685 aa4.74□□□□□ -1.65
VAPA-208ENST00000584796 PPARGC1AQ9UBK2 798 aaKnown RBP4.74□□□□□ -1.65
VAPA-208ENST00000584796 SRRDQ9UH36 339 aa4.74□□□□□ -1.65
VAPA-208ENST00000584796 SLC27A2O14975 620 aa4.73□□□□□ -1.65
VAPA-208ENST00000584796 C6P13671 934 aa4.73□□□□□ -1.65
VAPA-208ENST00000584796 GNL2Q13823 731 aaKnown RBP4.73□□□□□ -1.65
VAPA-208ENST00000584796 R3HDM1Q15032 1099 aaKnown RBP4.73□□□□□ -1.65
VAPA-208ENST00000584796 HABP4Q5JVS0 413 aaKnown RBP4.73□□□□□ -1.65
VAPA-208ENST00000584796 VASNQ6EMK4 673 aa4.73□□□□□ -1.65
VAPA-208ENST00000584796 CRIP3Q6Q6R5 217 aa4.73□□□□□ -1.65
VAPA-208ENST00000584796 OTOP3Q7RTS5 596 aa4.73□□□□□ -1.65
VAPA-208ENST00000584796 Q8N1X5 172 aa4.73□□□□□ -1.65
VAPA-208ENST00000584796 NUDT10Q8NFP7 164 aa4.73□□□□□ -1.65
VAPA-208ENST00000584796 UHMK1Q8TAS1 419 aaKnown RBP4.73□□□□□ -1.65
VAPA-208ENST00000584796 CLEC4DQ8WXI8 215 aa4.73□□□□□ -1.65
VAPA-208ENST00000584796 NUDT11Q96G61 164 aa4.73□□□□□ -1.65
VAPA-208ENST00000584796 SGSM3Q96HU1 749 aa4.73□□□□□ -1.65
VAPA-208ENST00000584796 TINF2Q9BSI4 451 aa4.73□□□□□ -1.65
VAPA-208ENST00000584796 B4GALT4O60513 344 aa4.72□□□□□ -1.65
VAPA-208ENST00000584796 KNG1P01042 644 aa4.72□□□□□ -1.65
VAPA-208ENST00000584796 FSHBP01225 129 aa4.72□□□□□ -1.65
VAPA-208ENST00000584796 FAHP16930 419 aa4.72□□□□□ -1.65
VAPA-208ENST00000584796 SELENOPP49908 381 aa4.72□□□□□ -1.65
VAPA-208ENST00000584796 SMAD2Q15796 467 aaKnown RBP4.72□□□□□ -1.65
VAPA-208ENST00000584796 Q6ZUG5 572 aa4.72□□□□□ -1.65
VAPA-208ENST00000584796 USP53Q70EK8 1073 aa4.72□□□□□ -1.65
VAPA-208ENST00000584796 MCF2L2Q86YR7 1114 aa4.72□□□□□ -1.65
VAPA-208ENST00000584796 CELF2-AS1Q8N7Q2 184 aa4.72□□□□□ -1.65
VAPA-208ENST00000584796 SORCS2Q96PQ0 1159 aa4.72□□□□□ -1.65
VAPA-208ENST00000584796 PTPN18Q99952 460 aa4.72□□□□□ -1.65
VAPA-208ENST00000584796 CNOT4O95628 575 aaKnown RBP4.71□□□□□ -1.66
VAPA-208ENST00000584796 FGFR1P11362 822 aa4.71□□□□□ -1.66
VAPA-208ENST00000584796 GRK2P25098 689 aa4.71□□□□□ -1.66
VAPA-208ENST00000584796 GRK3P35626 688 aa4.71□□□□□ -1.66
VAPA-208ENST00000584796 ARID5AQ03989 594 aa4.71□□□□□ -1.66
VAPA-208ENST00000584796 GRIN1Q05586 938 aa4.71□□□□□ -1.66
VAPA-208ENST00000584796 TUSC3Q13454 348 aa4.71□□□□□ -1.66
VAPA-208ENST00000584796 HSP90AA2PQ14568 343 aaPredicted RBP4.71□□□□□ -1.66
VAPA-208ENST00000584796 NTRK3Q16288 839 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms