RNA–Protein interactions for RNA: ENST00000584754.1

PPP4R1-229, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 5

Gene PPP4R1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-229	ENST00000584754	LINC01356	Q8N9X3	169 aa		5.21	□□□□□ -1.58
PPP4R1-229	ENST00000584754	PIP4K2C	Q8TBX8	421 aa		5.21	□□□□□ -1.58
PPP4R1-229	ENST00000584754	SH3TC2	Q8TF17	1288 aa		5.21	□□□□□ -1.58
PPP4R1-229	ENST00000584754	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	5.21	□□□□□ -1.58
PPP4R1-229	ENST00000584754	SEC14L1	Q92503	715 aa		5.21	□□□□□ -1.58
PPP4R1-229	ENST00000584754	ZBTB8A	Q96BR9	441 aa		5.21	□□□□□ -1.58
PPP4R1-229	ENST00000584754	SPATA25	Q9BR10	227 aa		5.21	□□□□□ -1.58
PPP4R1-229	ENST00000584754	NGRN	Q9NPE2	291 aa	Known RBP	5.21	□□□□□ -1.58
PPP4R1-229	ENST00000584754	SPATA6	Q9NWH7	488 aa	Predicted RBP	5.21	□□□□□ -1.58
PPP4R1-229	ENST00000584754	TMEM260	Q9NX78	707 aa		5.21	□□□□□ -1.58
PPP4R1-229	ENST00000584754	RBPJL	Q9UBG7	517 aa		5.21	□□□□□ -1.58
PPP4R1-229	ENST00000584754	MRPL42	Q9Y6G3	142 aa	Known RBP	5.21	□□□□□ -1.58
PPP4R1-229	ENST00000584754	THOC2	Q8NI27	1593 aa	Known RBP	5.21	□□□□□ -1.58
PPP4R1-229	ENST00000584754		A0A0G2JLL6	359 aa	Predicted RBP	5.2	□□□□□ -1.58
PPP4R1-229	ENST00000584754	ANKRD62	A6NC57	917 aa		5.2	□□□□□ -1.58
PPP4R1-229	ENST00000584754	SLURP1	P55000	103 aa		5.2	□□□□□ -1.58
PPP4R1-229	ENST00000584754	HTRA3	P83110	453 aa		5.2	□□□□□ -1.58
PPP4R1-229	ENST00000584754	PLEKHG4	Q58EX7	1191 aa		5.2	□□□□□ -1.58
PPP4R1-229	ENST00000584754	ERICH6B	Q5W0A0	696 aa		5.2	□□□□□ -1.58
PPP4R1-229	ENST00000584754	EGFLAM	Q63HQ2	1017 aa		5.2	□□□□□ -1.58
PPP4R1-229	ENST00000584754	C16orf86	Q6ZW13	317 aa		5.2	□□□□□ -1.58
PPP4R1-229	ENST00000584754	JAZF1	Q86VZ6	243 aa		5.2	□□□□□ -1.58
PPP4R1-229	ENST00000584754	RIOX2	Q8IUF8	465 aa		5.2	□□□□□ -1.58
PPP4R1-229	ENST00000584754		Q8N1Y9	231 aa		5.2	□□□□□ -1.58
PPP4R1-229	ENST00000584754	CPA5	Q8WXQ8	436 aa		5.2	□□□□□ -1.58
PPP4R1-229	ENST00000584754	RNPC3	Q96LT9	517 aa	Known RBP	5.2	□□□□□ -1.58
PPP4R1-229	ENST00000584754	FEZ1	Q99689	392 aa		5.2	□□□□□ -1.58
PPP4R1-229	ENST00000584754	CDC6	Q99741	560 aa		5.2	□□□□□ -1.58
PPP4R1-229	ENST00000584754	XYLT2	Q9H1B5	865 aa		5.2	□□□□□ -1.58
PPP4R1-229	ENST00000584754	ADAM7	Q9H2U9	754 aa		5.2	□□□□□ -1.58
PPP4R1-229	ENST00000584754	GPR27	Q9NS67	375 aa		5.2	□□□□□ -1.58
PPP4R1-229	ENST00000584754	PLAA	Q9Y263	795 aa		5.2	□□□□□ -1.58
PPP4R1-229	ENST00000584754	KDM2B	Q8NHM5	1336 aa		5.2	□□□□□ -1.58
PPP4R1-229	ENST00000584754	TCRBV5S2	A0A599	114 aa		5.19	□□□□□ -1.58
PPP4R1-229	ENST00000584754		H7BY64	318 aa		5.19	□□□□□ -1.58
PPP4R1-229	ENST00000584754	HGS	O14964	777 aa	Predicted RBP	5.19	□□□□□ -1.58
PPP4R1-229	ENST00000584754	SLC27A2	O14975	620 aa		5.19	□□□□□ -1.58
PPP4R1-229	ENST00000584754	DGKI	O75912	1065 aa		5.19	□□□□□ -1.58
PPP4R1-229	ENST00000584754	LTF	P02788	710 aa		5.19	□□□□□ -1.58
PPP4R1-229	ENST00000584754	CYP2C8	P10632	490 aa		5.19	□□□□□ -1.58
PPP4R1-229	ENST00000584754	IBSP	P21815	317 aa	Predicted RBP	5.19	□□□□□ -1.58
PPP4R1-229	ENST00000584754	SLC6A11	P48066	632 aa		5.19	□□□□□ -1.58
PPP4R1-229	ENST00000584754	GRIN1	Q05586	938 aa		5.19	□□□□□ -1.58
PPP4R1-229	ENST00000584754	CR1L	Q2VPA4	569 aa		5.19	□□□□□ -1.58
PPP4R1-229	ENST00000584754	PHF19	Q5T6S3	580 aa		5.19	□□□□□ -1.58
PPP4R1-229	ENST00000584754	LBX2	Q6XYB7	198 aa		5.19	□□□□□ -1.58
PPP4R1-229	ENST00000584754	SAPCD2	Q86UD0	394 aa		5.19	□□□□□ -1.58
PPP4R1-229	ENST00000584754	SP8	Q8IXZ3	490 aa		5.19	□□□□□ -1.58
PPP4R1-229	ENST00000584754	NUB1	Q9Y5A7	615 aa		5.19	□□□□□ -1.58
PPP4R1-229	ENST00000584754	PCDHB4	Q9Y5E5	795 aa		5.19	□□□□□ -1.58
PPP4R1-229	ENST00000584754	NKRF	O15226	690 aa	Known RBP eCLIP	5.18	□□□□□ -1.58
PPP4R1-229	ENST00000584754	TADA3	O75528	432 aa		5.18	□□□□□ -1.58
PPP4R1-229	ENST00000584754	LIPI	Q6XZB0	460 aa		5.18	□□□□□ -1.58
PPP4R1-229	ENST00000584754	MIB1	Q86YT6	1006 aa		5.18	□□□□□ -1.58
PPP4R1-229	ENST00000584754	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	5.18	□□□□□ -1.58
PPP4R1-229	ENST00000584754	DCAF4	Q8WV16	495 aa		5.18	□□□□□ -1.58
PPP4R1-229	ENST00000584754	CLEC4D	Q8WXI8	215 aa		5.18	□□□□□ -1.58
PPP4R1-229	ENST00000584754	EXOC2	Q96KP1	924 aa		5.18	□□□□□ -1.58
PPP4R1-229	ENST00000584754	ZSWIM3	Q96MP5	696 aa		5.18	□□□□□ -1.58
PPP4R1-229	ENST00000584754	C11orf84	Q9BUA3	381 aa	Predicted RBP	5.18	□□□□□ -1.58
PPP4R1-229	ENST00000584754	WASF3	Q9UPY6	502 aa		5.18	□□□□□ -1.58
PPP4R1-229	ENST00000584754	JAG2	Q9Y219	1238 aa		5.18	□□□□□ -1.58
PPP4R1-229	ENST00000584754	ATAD2B	Q9ULI0	1458 aa		5.18	□□□□□ -1.58
PPP4R1-229	ENST00000584754	TRBV23-1	A0A0A0MS06	115 aa		5.17	□□□□□ -1.58
PPP4R1-229	ENST00000584754	KRIT1	O00522	736 aa		5.17	□□□□□ -1.58
PPP4R1-229	ENST00000584754	LRG1	P02750	347 aa		5.17	□□□□□ -1.58
PPP4R1-229	ENST00000584754	NAT1	P18440	290 aa		5.17	□□□□□ -1.58
PPP4R1-229	ENST00000584754	GPR85	P60893	370 aa		5.17	□□□□□ -1.58
PPP4R1-229	ENST00000584754	STYK1	Q6J9G0	422 aa		5.17	□□□□□ -1.58
PPP4R1-229	ENST00000584754	RSPO2	Q6UXX9	243 aa	Predicted RBP	5.17	□□□□□ -1.58
PPP4R1-229	ENST00000584754	TTLL7	Q6ZT98	887 aa		5.17	□□□□□ -1.58
PPP4R1-229	ENST00000584754	SCUBE1	Q8IWY4	988 aa		5.17	□□□□□ -1.58
PPP4R1-229	ENST00000584754	FAM126B	Q8IXS8	530 aa		5.17	□□□□□ -1.58
PPP4R1-229	ENST00000584754	ANKRD13A	Q8IZ07	590 aa		5.17	□□□□□ -1.58
PPP4R1-229	ENST00000584754	DDX1	Q92499	740 aa	Known RBP	5.17	□□□□□ -1.58
PPP4R1-229	ENST00000584754	BRINP2	Q9C0B6	783 aa		5.17	□□□□□ -1.58
PPP4R1-229	ENST00000584754	EPB41L1	Q9H4G0	881 aa		5.17	□□□□□ -1.58
PPP4R1-229	ENST00000584754	IPPK	Q9H8X2	491 aa		5.17	□□□□□ -1.58
PPP4R1-229	ENST00000584754	FANCL	Q9NW38	375 aa		5.17	□□□□□ -1.58
PPP4R1-229	ENST00000584754	MYOT	Q9UBF9	498 aa		5.17	□□□□□ -1.58
PPP4R1-229	ENST00000584754	PCDHA8	Q9Y5H6	950 aa		5.17	□□□□□ -1.58
PPP4R1-229	ENST00000584754	KIF21A	Q7Z4S6	1674 aa		5.16	□□□□□ -1.58
PPP4R1-229	ENST00000584754	SOD2	P04179	222 aa		5.16	□□□□□ -1.58
PPP4R1-229	ENST00000584754	GRK2	P25098	689 aa		5.16	□□□□□ -1.58
PPP4R1-229	ENST00000584754	GRK3	P35626	688 aa		5.16	□□□□□ -1.58
PPP4R1-229	ENST00000584754	KCNC1	P48547	511 aa		5.16	□□□□□ -1.58
PPP4R1-229	ENST00000584754	ITGA1	P56199	1179 aa		5.16	□□□□□ -1.58
PPP4R1-229	ENST00000584754	CAP1	Q01518	475 aa		5.16	□□□□□ -1.58
PPP4R1-229	ENST00000584754	RTP5	Q14D33	572 aa		5.16	□□□□□ -1.58
PPP4R1-229	ENST00000584754	NT5DC1	Q5TFE4	455 aa		5.16	□□□□□ -1.58
PPP4R1-229	ENST00000584754	TMC5	Q6UXY8	1006 aa		5.16	□□□□□ -1.58
PPP4R1-229	ENST00000584754	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	5.16	□□□□□ -1.58
PPP4R1-229	ENST00000584754	IFNL3	Q8IZI9	196 aa		5.16	□□□□□ -1.58
PPP4R1-229	ENST00000584754	CARF	Q8N187	725 aa		5.16	□□□□□ -1.58
PPP4R1-229	ENST00000584754	LILRB2	Q8N423	598 aa		5.16	□□□□□ -1.58
PPP4R1-229	ENST00000584754	LINC00482	Q8N8I6	264 aa		5.16	□□□□□ -1.58
PPP4R1-229	ENST00000584754	ZNF652	Q9Y2D9	606 aa		5.16	□□□□□ -1.58
PPP4R1-229	ENST00000584754	TELO2	Q9Y4R8	837 aa		5.16	□□□□□ -1.58
PPP4R1-229	ENST00000584754	PCDHA9	Q9Y5H5	950 aa		5.16	□□□□□ -1.58
PPP4R1-229	ENST00000584754	HMGXB3	Q12766	1538 aa		5.16	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms