RNA–Protein interactions for RNA: ENST00000584716.1

CDK5R1-202, Transcript of cyclin dependent kinase 5 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CDK5R1, Length 962 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5R1-202ENST00000584716 ATP2C1P98194 919 aaPredicted RBP13.99□□□□□ -0.17
CDK5R1-202ENST00000584716 IL17AQ16552 155 aa13.99□□□□□ -0.17
CDK5R1-202ENST00000584716 LRCH2Q5VUJ6 765 aa13.99□□□□□ -0.17
CDK5R1-202ENST00000584716 CCDC62Q6P9F0 684 aa13.99□□□□□ -0.17
CDK5R1-202ENST00000584716 FBXO46Q6PJ61 603 aaPredicted RBP13.99□□□□□ -0.17
CDK5R1-202ENST00000584716 DTHD1Q6ZMT9 781 aa13.99□□□□□ -0.17
CDK5R1-202ENST00000584716 DHX37Q8IY37 1157 aaKnown RBP13.99□□□□□ -0.17
CDK5R1-202ENST00000584716 LINC00301Q8NCQ3 95 aa13.99□□□□□ -0.17
CDK5R1-202ENST00000584716 SLC5A5Q92911 643 aa13.99□□□□□ -0.17
CDK5R1-202ENST00000584716 SPATA32Q96LK8 384 aa13.99□□□□□ -0.17
CDK5R1-202ENST00000584716 FAM20AQ96MK3 541 aa13.99□□□□□ -0.17
CDK5R1-202ENST00000584716 SDF4Q9BRK5 362 aa13.99□□□□□ -0.17
CDK5R1-202ENST00000584716 MLXIPQ9HAP2 919 aa13.99□□□□□ -0.17
CDK5R1-202ENST00000584716 PCDHA12Q9UN75 941 aa13.99□□□□□ -0.17
CDK5R1-202ENST00000584716 VWA3AA6NCI4 1184 aa13.98□□□□□ -0.17
CDK5R1-202ENST00000584716 TBX3O15119 743 aa13.98□□□□□ -0.17
CDK5R1-202ENST00000584716 DHX15O43143 795 aaKnown RBP13.98□□□□□ -0.17
CDK5R1-202ENST00000584716 DYNC1LI2O43237 492 aaPredicted RBP13.98□□□□□ -0.17
CDK5R1-202ENST00000584716 BMP15O95972 392 aa13.98□□□□□ -0.17
CDK5R1-202ENST00000584716 AKR1A1P14550 325 aa13.98□□□□□ -0.17
CDK5R1-202ENST00000584716 NEDD9Q14511 834 aa13.98□□□□□ -0.17
CDK5R1-202ENST00000584716 PKN2Q16513 984 aaKnown RBP13.98□□□□□ -0.17
CDK5R1-202ENST00000584716 DUSP28Q4G0W2 176 aa13.98□□□□□ -0.17
CDK5R1-202ENST00000584716 SLFN12Q8IYM2 578 aa13.98□□□□□ -0.17
CDK5R1-202ENST00000584716 LEO1Q8WVC0 666 aaPredicted RBP13.98□□□□□ -0.17
CDK5R1-202ENST00000584716 TEKT3Q9BXF9 490 aa13.98□□□□□ -0.17
CDK5R1-202ENST00000584716 TTC12Q9H892 705 aaPredicted RBP13.98□□□□□ -0.17
CDK5R1-202ENST00000584716 HMX1Q9NP08 348 aaPredicted RBP13.98□□□□□ -0.17
CDK5R1-202ENST00000584716 TBC1D22BQ9NU19 505 aa13.98□□□□□ -0.17
CDK5R1-202ENST00000584716 NRBP1Q9UHY1 535 aa13.98□□□□□ -0.17
CDK5R1-202ENST00000584716 RCOR1Q9UKL0 485 aa13.98□□□□□ -0.17
CDK5R1-202ENST00000584716 TELO2Q9Y4R8 837 aa13.98□□□□□ -0.17
CDK5R1-202ENST00000584716 LAD1O00515 517 aa13.97□□□□□ -0.17
CDK5R1-202ENST00000584716 SEPT4O43236 478 aa13.97□□□□□ -0.17
CDK5R1-202ENST00000584716 PSMD10O75832 226 aa13.97□□□□□ -0.17
CDK5R1-202ENST00000584716 YEATS4O95619 227 aa13.97□□□□□ -0.17
CDK5R1-202ENST00000584716 GH1P01241 217 aa13.97□□□□□ -0.17
CDK5R1-202ENST00000584716 MYCNP04198 464 aaPredicted RBP13.97□□□□□ -0.17
CDK5R1-202ENST00000584716 ME1P48163 572 aa13.97□□□□□ -0.17
CDK5R1-202ENST00000584716 GRIN1Q05586 938 aa13.97□□□□□ -0.17
CDK5R1-202ENST00000584716 MTFR1Q15390 333 aa13.97□□□□□ -0.17
CDK5R1-202ENST00000584716 CELF3Q5SZQ8 465 aaKnown RBP13.97□□□□□ -0.17
CDK5R1-202ENST00000584716 MAP3K21Q5TCX8 1036 aa13.97□□□□□ -0.17
CDK5R1-202ENST00000584716 NCAPH2Q6IBW4 605 aa13.97□□□□□ -0.17
CDK5R1-202ENST00000584716 GIMAP8Q8ND71 665 aaPredicted RBP13.97□□□□□ -0.17
CDK5R1-202ENST00000584716 OR6J1Q8NGC5 347 aa13.97□□□□□ -0.17
CDK5R1-202ENST00000584716 CLIC6Q96NY7 704 aa13.97□□□□□ -0.17
CDK5R1-202ENST00000584716 SENP7Q9BQF6 1050 aa13.97□□□□□ -0.17
CDK5R1-202ENST00000584716 SCAND2PQ9GZW5 306 aaPredicted RBP13.97□□□□□ -0.17
CDK5R1-202ENST00000584716 UNC93B1Q9H1C4 597 aa13.97□□□□□ -0.17
CDK5R1-202ENST00000584716 UNC45AQ9H3U1 944 aa13.97□□□□□ -0.17
CDK5R1-202ENST00000584716 SLC9A2Q9UBY0 812 aa13.97□□□□□ -0.17
CDK5R1-202ENST00000584716 SAMM50Q9Y512 469 aa13.97□□□□□ -0.17
CDK5R1-202ENST00000584716 NKRFO15226 690 aaKnown RBP eCLIP13.96□□□□□ -0.17
CDK5R1-202ENST00000584716 FARP2O94887 1054 aaPredicted RBP13.96□□□□□ -0.17
CDK5R1-202ENST00000584716 PRPHP41219 470 aa13.96□□□□□ -0.17
CDK5R1-202ENST00000584716 IRX5P78411 483 aaPredicted RBP13.96□□□□□ -0.17
CDK5R1-202ENST00000584716 LAMC2Q13753 1193 aa13.96□□□□□ -0.17
CDK5R1-202ENST00000584716 TMEM266Q2M3C6 531 aa13.96□□□□□ -0.17
CDK5R1-202ENST00000584716 SPECC1Q5M775 1068 aa13.96□□□□□ -0.17
CDK5R1-202ENST00000584716 SPATA33Q96N06 139 aa13.96□□□□□ -0.17
CDK5R1-202ENST00000584716 RIT2Q99578 217 aa13.96□□□□□ -0.17
CDK5R1-202ENST00000584716 MCOLN1Q9GZU1 580 aa13.96□□□□□ -0.17
CDK5R1-202ENST00000584716 JPH1Q9HDC5 661 aaPredicted RBP13.96□□□□□ -0.17
CDK5R1-202ENST00000584716 PCDH10Q9P2E7 1040 aa13.96□□□□□ -0.17
CDK5R1-202ENST00000584716 TCEAL9Q9UHQ7 104 aa13.96□□□□□ -0.17
CDK5R1-202ENST00000584716 FBXO2Q9UK22 296 aaPredicted RBP13.96□□□□□ -0.17
CDK5R1-202ENST00000584716 PCDHA7Q9UN72 937 aa13.96□□□□□ -0.17
CDK5R1-202ENST00000584716 GNEQ9Y223 722 aaKnown RBP13.96□□□□□ -0.17
CDK5R1-202ENST00000584716 SRPRBQ9Y5M8 271 aaKnown RBP13.96□□□□□ -0.17
CDK5R1-202ENST00000584716 NFASCO94856 1347 aa13.95□□□□□ -0.18
CDK5R1-202ENST00000584716 POTEMA6NI47 508 aa13.95□□□□□ -0.18
CDK5R1-202ENST00000584716 PP2D1A8MPX8 630 aa13.95□□□□□ -0.18
CDK5R1-202ENST00000584716 NOP56O00567 594 aaKnown RBP13.95□□□□□ -0.18
CDK5R1-202ENST00000584716 PPP6R2O75170 966 aa13.95□□□□□ -0.18
CDK5R1-202ENST00000584716 CCNE2O96020 404 aa13.95□□□□□ -0.18
CDK5R1-202ENST00000584716 RARBP10826 455 aa13.95□□□□□ -0.18
CDK5R1-202ENST00000584716 CCL5P13501 91 aa13.95□□□□□ -0.18
CDK5R1-202ENST00000584716 CDC25AP30304 524 aa13.95□□□□□ -0.18
CDK5R1-202ENST00000584716 ARHGAP1Q07960 439 aa13.95□□□□□ -0.18
CDK5R1-202ENST00000584716 ARL6IP4Q66PJ3 421 aaKnown RBP13.95□□□□□ -0.18
CDK5R1-202ENST00000584716 METTL7BQ6UX53 244 aa13.95□□□□□ -0.18
CDK5R1-202ENST00000584716 MIER3Q7Z3K6 550 aa13.95□□□□□ -0.18
CDK5R1-202ENST00000584716 TLK2Q86UE8 772 aa13.95□□□□□ -0.18
CDK5R1-202ENST00000584716 KRI1Q8N9T8 703 aaKnown RBP13.95□□□□□ -0.18
CDK5R1-202ENST00000584716 KCNG4Q8TDN1 519 aa13.95□□□□□ -0.18
CDK5R1-202ENST00000584716 AFG1LQ8WV93 481 aa13.95□□□□□ -0.18
CDK5R1-202ENST00000584716 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.95□□□□□ -0.18
CDK5R1-202ENST00000584716 AP5M1Q9H0R1 490 aa13.95□□□□□ -0.18
CDK5R1-202ENST00000584716 RNF208Q9H0X6 261 aa13.95□□□□□ -0.18
CDK5R1-202ENST00000584716 CSRNP2Q9H175 543 aa13.95□□□□□ -0.18
CDK5R1-202ENST00000584716 LRWD1Q9UFC0 647 aa13.95□□□□□ -0.18
CDK5R1-202ENST00000584716 DDX20Q9UHI6 824 aaKnown RBP13.95□□□□□ -0.18
CDK5R1-202ENST00000584716 VAV3Q9UKW4 847 aa13.95□□□□□ -0.18
CDK5R1-202ENST00000584716 POTEFA5A3E0 1075 aa13.94□□□□□ -0.18
CDK5R1-202ENST00000584716 EML1O00423 815 aa13.94□□□□□ -0.18
CDK5R1-202ENST00000584716 DUSP11O75319 330 aaKnown RBP13.94□□□□□ -0.18
CDK5R1-202ENST00000584716 PGK1P00558 417 aa13.94□□□□□ -0.18
CDK5R1-202ENST00000584716 FXR2P51116 673 aaKnown RBP eCLIP13.94□□□□□ -0.18
CDK5R1-202ENST00000584716 ACTR2P61160 394 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms