RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 NLRP10Q86W26 655 aa5.8□□□□□ -1.48
PPP4R1-227ENST00000583988 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.8□□□□□ -1.48
PPP4R1-227ENST00000583988 CPA5Q8WXQ8 436 aa5.8□□□□□ -1.48
PPP4R1-227ENST00000583988 ZBTB8AQ96BR9 441 aa5.8□□□□□ -1.48
PPP4R1-227ENST00000583988 CHAMP1Q96JM3 812 aa5.8□□□□□ -1.48
PPP4R1-227ENST00000583988 USP40Q9NVE5 1235 aa5.8□□□□□ -1.48
PPP4R1-227ENST00000583988 FANCLQ9NW38 375 aa5.8□□□□□ -1.48
PPP4R1-227ENST00000583988 SGSM2O43147 1006 aa5.79□□□□□ -1.48
PPP4R1-227ENST00000583988 SMARCA5O60264 1052 aaPredicted RBP5.79□□□□□ -1.48
PPP4R1-227ENST00000583988 APPP05067 770 aa5.79□□□□□ -1.48
PPP4R1-227ENST00000583988 CYP2C8P10632 490 aa5.79□□□□□ -1.48
PPP4R1-227ENST00000583988 DLX2Q07687 328 aaPredicted RBP5.79□□□□□ -1.48
PPP4R1-227ENST00000583988 NT5DC1Q5TFE4 455 aa5.79□□□□□ -1.48
PPP4R1-227ENST00000583988 EGFLAMQ63HQ2 1017 aa5.79□□□□□ -1.48
PPP4R1-227ENST00000583988 CD300LDQ6UXZ3 194 aa5.79□□□□□ -1.48
PPP4R1-227ENST00000583988 ETV3LQ6ZN32 361 aa5.79□□□□□ -1.48
PPP4R1-227ENST00000583988 MILR1Q7Z6M3 343 aa5.79□□□□□ -1.48
PPP4R1-227ENST00000583988 SEC14L1Q92503 715 aa5.79□□□□□ -1.48
PPP4R1-227ENST00000583988 FEZ1Q99689 392 aa5.79□□□□□ -1.48
PPP4R1-227ENST00000583988 SYT3Q9BQG1 590 aa5.79□□□□□ -1.48
PPP4R1-227ENST00000583988 NCOA5Q9HCD5 579 aaKnown RBP5.79□□□□□ -1.48
PPP4R1-227ENST00000583988 CLDND1Q9NY35 253 aa5.79□□□□□ -1.48
PPP4R1-227ENST00000583988 PALD1Q9ULE6 856 aa5.79□□□□□ -1.48
PPP4R1-227ENST00000583988 TRAF6Q9Y4K3 522 aa5.79□□□□□ -1.48
PPP4R1-227ENST00000583988 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.78□□□□□ -1.48
PPP4R1-227ENST00000583988 SH3D21A4FU49 640 aa5.78□□□□□ -1.48
PPP4R1-227ENST00000583988 C8BP07358 591 aa5.78□□□□□ -1.48
PPP4R1-227ENST00000583988 KIZQ2M2Z5 673 aa5.78□□□□□ -1.48
PPP4R1-227ENST00000583988 FRMD5Q7Z6J6 570 aa5.78□□□□□ -1.48
PPP4R1-227ENST00000583988 CARFQ8N187 725 aa5.78□□□□□ -1.48
PPP4R1-227ENST00000583988 FAM26EQ8N5C1 309 aa5.78□□□□□ -1.48
PPP4R1-227ENST00000583988 GSTCDQ8NEC7 633 aa5.78□□□□□ -1.48
PPP4R1-227ENST00000583988 CXorf38Q8TB03 319 aa5.78□□□□□ -1.48
PPP4R1-227ENST00000583988 PLAAQ9Y263 795 aa5.78□□□□□ -1.48
PPP4R1-227ENST00000583988 COA3Q9Y2R0 106 aaPredicted RBP5.78□□□□□ -1.48
PPP4R1-227ENST00000583988 ASMTLO95671 621 aa5.77□□□□□ -1.49
PPP4R1-227ENST00000583988 SLC6A11P48066 632 aa5.77□□□□□ -1.49
PPP4R1-227ENST00000583988 ERICH6BQ5W0A0 696 aa5.77□□□□□ -1.49
PPP4R1-227ENST00000583988 STK32CQ86UX6 486 aa5.77□□□□□ -1.49
PPP4R1-227ENST00000583988 SLC7A14Q8TBB6 771 aa5.77□□□□□ -1.49
PPP4R1-227ENST00000583988 TEPSINQ96N21 525 aa5.77□□□□□ -1.49
PPP4R1-227ENST00000583988 GORASP1Q9BQQ3 440 aa5.77□□□□□ -1.49
PPP4R1-227ENST00000583988 YIPF4Q9BSR8 244 aa5.77□□□□□ -1.49
PPP4R1-227ENST00000583988 JAM3Q9BX67 310 aa5.77□□□□□ -1.49
PPP4R1-227ENST00000583988 SLC52A2Q9HAB3 445 aa5.77□□□□□ -1.49
PPP4R1-227ENST00000583988 INTS7Q9NVH2 962 aaKnown RBP5.77□□□□□ -1.49
PPP4R1-227ENST00000583988 SPATA6Q9NWH7 488 aaPredicted RBP5.77□□□□□ -1.49
PPP4R1-227ENST00000583988 NTMQ9P121 344 aa5.77□□□□□ -1.49
PPP4R1-227ENST00000583988 PCDHA8Q9Y5H6 950 aa5.77□□□□□ -1.49
PPP4R1-227ENST00000583988 WNT9AO14904 365 aa5.76□□□□□ -1.49
PPP4R1-227ENST00000583988 PPP1R12AO14974 1030 aaPredicted RBP5.76□□□□□ -1.49
PPP4R1-227ENST00000583988 PRICKLE3O43900 615 aaPredicted RBP5.76□□□□□ -1.49
PPP4R1-227ENST00000583988 TADA3O75528 432 aa5.76□□□□□ -1.49
PPP4R1-227ENST00000583988 DGKIO75912 1065 aa5.76□□□□□ -1.49
PPP4R1-227ENST00000583988 NPTXRO95502 500 aa5.76□□□□□ -1.49
PPP4R1-227ENST00000583988 CELA3BP08861 270 aa5.76□□□□□ -1.49
PPP4R1-227ENST00000583988 STAT5AP42229 794 aa5.76□□□□□ -1.49
PPP4R1-227ENST00000583988 SARSP49591 514 aaKnown RBP5.76□□□□□ -1.49
PPP4R1-227ENST00000583988 PAK1Q13153 545 aa5.76□□□□□ -1.49
PPP4R1-227ENST00000583988 TTLL7Q6ZT98 887 aa5.76□□□□□ -1.49
PPP4R1-227ENST00000583988 FERMT3Q86UX7 667 aa5.76□□□□□ -1.49
PPP4R1-227ENST00000583988 ZC3H18Q86VM9 953 aaKnown RBP5.76□□□□□ -1.49
PPP4R1-227ENST00000583988 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.76□□□□□ -1.49
PPP4R1-227ENST00000583988 DDX1Q92499 740 aaKnown RBP5.76□□□□□ -1.49
PPP4R1-227ENST00000583988 NINJ1Q92982 152 aa5.76□□□□□ -1.49
PPP4R1-227ENST00000583988 CLUHP3Q96NS8 147 aa5.76□□□□□ -1.49
PPP4R1-227ENST00000583988 ALG1Q9BT22 464 aa5.76□□□□□ -1.49
PPP4R1-227ENST00000583988 BDH2Q9BUT1 245 aa5.76□□□□□ -1.49
PPP4R1-227ENST00000583988 SLKQ9H2G2 1235 aaPredicted RBP5.76□□□□□ -1.49
PPP4R1-227ENST00000583988 EPB41L1Q9H4G0 881 aa5.76□□□□□ -1.49
PPP4R1-227ENST00000583988 PRKAB1Q9Y478 270 aa5.76□□□□□ -1.49
PPP4R1-227ENST00000583988 PCDHA9Q9Y5H5 950 aa5.76□□□□□ -1.49
PPP4R1-227ENST00000583988 LOC105371045A0A1W2PR82 267 aa5.75□□□□□ -1.49
PPP4R1-227ENST00000583988 FAM47E-STBD1D6RA91 191 aa5.75□□□□□ -1.49
PPP4R1-227ENST00000583988 ARVCFO00192 962 aa5.75□□□□□ -1.49
PPP4R1-227ENST00000583988 HGSO14964 777 aaPredicted RBP5.75□□□□□ -1.49
PPP4R1-227ENST00000583988 RAPGEF3O95398 923 aa5.75□□□□□ -1.49
PPP4R1-227ENST00000583988 CRTAMO95727 393 aa5.75□□□□□ -1.49
PPP4R1-227ENST00000583988 SOD2P04179 222 aa5.75□□□□□ -1.49
PPP4R1-227ENST00000583988 GRK2P25098 689 aa5.75□□□□□ -1.49
PPP4R1-227ENST00000583988 GRK3P35626 688 aa5.75□□□□□ -1.49
PPP4R1-227ENST00000583988 GJA9P57773 515 aa5.75□□□□□ -1.49
PPP4R1-227ENST00000583988 GUCY1A3Q02108 690 aa5.75□□□□□ -1.49
PPP4R1-227ENST00000583988 RTP5Q14D33 572 aa5.75□□□□□ -1.49
PPP4R1-227ENST00000583988 CHRNA2Q15822 529 aa5.75□□□□□ -1.49
PPP4R1-227ENST00000583988 SKOR2Q2VWA4 1001 aaPredicted RBP5.75□□□□□ -1.49
PPP4R1-227ENST00000583988 UBXN11Q5T124 520 aa5.75□□□□□ -1.49
PPP4R1-227ENST00000583988 PCDH19Q8TAB3 1148 aa5.75□□□□□ -1.49
PPP4R1-227ENST00000583988 SCLYQ96I15 445 aa5.75□□□□□ -1.49
PPP4R1-227ENST00000583988 MAGEB10Q96LZ2 347 aaPredicted RBP5.75□□□□□ -1.49
PPP4R1-227ENST00000583988 C11orf84Q9BUA3 381 aaPredicted RBP5.75□□□□□ -1.49
PPP4R1-227ENST00000583988 PPARGC1AQ9UBK2 798 aaKnown RBP5.75□□□□□ -1.49
PPP4R1-227ENST00000583988 NDOR1Q9UHB4 597 aa5.75□□□□□ -1.49
PPP4R1-227ENST00000583988 SFMBT1Q9UHJ3 866 aa5.75□□□□□ -1.49
PPP4R1-227ENST00000583988 B4E1Z4 1266 aa5.74□□□□□ -1.49
PPP4R1-227ENST00000583988 PLP2Q04941 152 aa5.74□□□□□ -1.49
PPP4R1-227ENST00000583988 EMC4Q5J8M3 183 aa5.74□□□□□ -1.49
PPP4R1-227ENST00000583988 HABP4Q5JVS0 413 aaKnown RBP5.74□□□□□ -1.49
PPP4R1-227ENST00000583988 STEAP3Q658P3 488 aa5.74□□□□□ -1.49
PPP4R1-227ENST00000583988 MTDHQ86UE4 582 aaKnown RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms