RNA–Protein interactions for RNA: ENST00000583877.5

NUP85-223, Transcript of nucleoporin 85, human

TSL 3

Gene NUP85, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-223	ENST00000583877		A0A0D9SFI3	127 aa		10.19	□□□□□ -0.78
NUP85-223	ENST00000583877	POTEB3	A0JP26	581 aa		10.19	□□□□□ -0.78
NUP85-223	ENST00000583877		H3BNC9	293 aa		10.19	□□□□□ -0.78
NUP85-223	ENST00000583877	ATMIN	O43313	823 aa	Predicted RBP	10.19	□□□□□ -0.78
NUP85-223	ENST00000583877	NR3C2	P08235	984 aa		10.19	□□□□□ -0.78
NUP85-223	ENST00000583877	EIF2AK2	P19525	551 aa	Known RBP	10.19	□□□□□ -0.78
NUP85-223	ENST00000583877	NT5C2	P49902	561 aa		10.19	□□□□□ -0.78
NUP85-223	ENST00000583877	HAND2	P61296	217 aa		10.19	□□□□□ -0.78
NUP85-223	ENST00000583877	ZNF200	P98182	395 aa	Predicted RBP	10.19	□□□□□ -0.78
NUP85-223	ENST00000583877	COL19A1	Q14993	1142 aa		10.19	□□□□□ -0.78
NUP85-223	ENST00000583877	TMEM132A	Q24JP5	1023 aa		10.19	□□□□□ -0.78
NUP85-223	ENST00000583877	EPC2	Q52LR7	807 aa		10.19	□□□□□ -0.78
NUP85-223	ENST00000583877	ASPRV1	Q53RT3	343 aa		10.19	□□□□□ -0.78
NUP85-223	ENST00000583877	PLEKHG4	Q58EX7	1191 aa		10.19	□□□□□ -0.78
NUP85-223	ENST00000583877	CCDC178	Q5BJE1	867 aa		10.19	□□□□□ -0.78
NUP85-223	ENST00000583877	MYSM1	Q5VVJ2	828 aa		10.19	□□□□□ -0.78
NUP85-223	ENST00000583877	KCNV1	Q6PIU1	500 aa		10.19	□□□□□ -0.78
NUP85-223	ENST00000583877	POTEB	Q6S5H4	581 aa		10.19	□□□□□ -0.78
NUP85-223	ENST00000583877	SERINC5	Q86VE9	423 aa		10.19	□□□□□ -0.78
NUP85-223	ENST00000583877	ADGRF4	Q8IZF3	695 aa		10.19	□□□□□ -0.78
NUP85-223	ENST00000583877	MYOCD	Q8IZQ8	938 aa		10.19	□□□□□ -0.78
NUP85-223	ENST00000583877	PNMA1	Q8ND90	353 aa		10.19	□□□□□ -0.78
NUP85-223	ENST00000583877	BANK1	Q8NDB2	785 aa		10.19	□□□□□ -0.78
NUP85-223	ENST00000583877	DBF4B	Q8NFT6	615 aa		10.19	□□□□□ -0.78
NUP85-223	ENST00000583877	ESR2	Q92731	530 aa		10.19	□□□□□ -0.78
NUP85-223	ENST00000583877	PABPC5	Q96DU9	382 aa	Known RBP	10.19	□□□□□ -0.78
NUP85-223	ENST00000583877	UIMC1	Q96RL1	719 aa		10.19	□□□□□ -0.78
NUP85-223	ENST00000583877	RNF41	Q9H4P4	317 aa	Predicted RBP	10.19	□□□□□ -0.78
NUP85-223	ENST00000583877	PXMP2	Q9NR77	195 aa		10.19	□□□□□ -0.78
NUP85-223	ENST00000583877	PRKAG3	Q9UGI9	489 aa		10.19	□□□□□ -0.78
NUP85-223	ENST00000583877	FAM50B	Q9Y247	325 aa		10.19	□□□□□ -0.78
NUP85-223	ENST00000583877	MRPL11	Q9Y3B7	192 aa	Known RBP	10.19	□□□□□ -0.78
NUP85-223	ENST00000583877	PCDHB15	Q9Y5E8	787 aa		10.19	□□□□□ -0.78
NUP85-223	ENST00000583877	WDR87	Q6ZQQ6	2873 aa		10.19	□□□□□ -0.78
NUP85-223	ENST00000583877	KMT2E	Q8IZD2	1858 aa		10.19	□□□□□ -0.78
NUP85-223	ENST00000583877	PLXNA4	Q9HCM2	1894 aa		10.19	□□□□□ -0.78
NUP85-223	ENST00000583877	SPTBN4	Q9H254	2564 aa		10.19	□□□□□ -0.78
NUP85-223	ENST00000583877	CCDC171	Q6TFL3	1326 aa		10.18	□□□□□ -0.78
NUP85-223	ENST00000583877	RSPH10B2	B2RC85	870 aa		10.18	□□□□□ -0.78
NUP85-223	ENST00000583877	DCX	O43602	365 aa		10.18	□□□□□ -0.78
NUP85-223	ENST00000583877	RSPH10B	P0C881	870 aa		10.18	□□□□□ -0.78
NUP85-223	ENST00000583877	THPO	P40225	353 aa		10.18	□□□□□ -0.78
NUP85-223	ENST00000583877	GPM6B	Q13491	265 aa		10.18	□□□□□ -0.78
NUP85-223	ENST00000583877	DSG2	Q14126	1118 aa		10.18	□□□□□ -0.78
NUP85-223	ENST00000583877	HIC1	Q14526	733 aa		10.18	□□□□□ -0.78
NUP85-223	ENST00000583877	QRICH1	Q2TAL8	776 aa		10.18	□□□□□ -0.78
NUP85-223	ENST00000583877	ZNF589	Q86UQ0	364 aa	Predicted RBP	10.18	□□□□□ -0.78
NUP85-223	ENST00000583877	IQCA1	Q86XH1	822 aa		10.18	□□□□□ -0.78
NUP85-223	ENST00000583877	FBXO11	Q86XK2	927 aa		10.18	□□□□□ -0.78
NUP85-223	ENST00000583877	TBC1D10C	Q8IV04	446 aa		10.18	□□□□□ -0.78
NUP85-223	ENST00000583877	TMC2	Q8TDI7	906 aa		10.18	□□□□□ -0.78
NUP85-223	ENST00000583877	TOP1MT	Q969P6	601 aa		10.18	□□□□□ -0.78
NUP85-223	ENST00000583877	YME1L1	Q96TA2	773 aa		10.18	□□□□□ -0.78
NUP85-223	ENST00000583877	ZKSCAN3	Q9BRR0	538 aa		10.18	□□□□□ -0.78
NUP85-223	ENST00000583877	OCEL1	Q9H607	264 aa		10.18	□□□□□ -0.78
NUP85-223	ENST00000583877	MAP3K20	Q9NYL2	800 aa	Known RBP	10.18	□□□□□ -0.78
NUP85-223	ENST00000583877	VPS13A	Q96RL7	3174 aa		10.18	□□□□□ -0.78
NUP85-223	ENST00000583877	MYO10	Q9HD67	2058 aa		10.18	□□□□□ -0.78
NUP85-223	ENST00000583877	EVPL	Q92817	2033 aa		10.17	□□□□□ -0.78
NUP85-223	ENST00000583877	CACNA1H	O95180	2353 aa		10.17	□□□□□ -0.78
NUP85-223	ENST00000583877	NEDD4	P46934	1319 aa		10.17	□□□□□ -0.78
NUP85-223	ENST00000583877		H3BQ06	376 aa	Predicted RBP	10.17	□□□□□ -0.78
NUP85-223	ENST00000583877	NCK2	O43639	380 aa		10.17	□□□□□ -0.78
NUP85-223	ENST00000583877	CAND2	O75155	1236 aa		10.17	□□□□□ -0.78
NUP85-223	ENST00000583877	RGS20	O76081	388 aa		10.17	□□□□□ -0.78
NUP85-223	ENST00000583877	CFB	P00751	764 aa		10.17	□□□□□ -0.78
NUP85-223	ENST00000583877	TGFB3	P10600	412 aa		10.17	□□□□□ -0.78
NUP85-223	ENST00000583877	HOXC8	P31273	242 aa		10.17	□□□□□ -0.78
NUP85-223	ENST00000583877	MRE11	P49959	708 aa		10.17	□□□□□ -0.78
NUP85-223	ENST00000583877	HSD17B4	P51659	736 aa		10.17	□□□□□ -0.78
NUP85-223	ENST00000583877	PDE1A	P54750	535 aa		10.17	□□□□□ -0.78
NUP85-223	ENST00000583877	NHLH1	Q02575	133 aa		10.17	□□□□□ -0.78
NUP85-223	ENST00000583877	GHRHR	Q02643	423 aa		10.17	□□□□□ -0.78
NUP85-223	ENST00000583877	ZP2	Q05996	745 aa		10.17	□□□□□ -0.78
NUP85-223	ENST00000583877	NMI	Q13287	307 aa	Predicted RBP	10.17	□□□□□ -0.78
NUP85-223	ENST00000583877	HSDL1	Q3SXM5	330 aa		10.17	□□□□□ -0.78
NUP85-223	ENST00000583877	TCEAL5	Q5H9L2	206 aa		10.17	□□□□□ -0.78
NUP85-223	ENST00000583877	CELF3	Q5SZQ8	465 aa	Known RBP	10.17	□□□□□ -0.78
NUP85-223	ENST00000583877	TMEM192	Q8IY95	271 aa		10.17	□□□□□ -0.78
NUP85-223	ENST00000583877	SEPT8	Q92599	483 aa		10.17	□□□□□ -0.78
NUP85-223	ENST00000583877	ANKS1A	Q92625	1134 aa		10.17	□□□□□ -0.78
NUP85-223	ENST00000583877	ATP6V0A1	Q93050	837 aa		10.17	□□□□□ -0.78
NUP85-223	ENST00000583877	SPATA33	Q96N06	139 aa		10.17	□□□□□ -0.78
NUP85-223	ENST00000583877	C16orf70	Q9BSU1	422 aa		10.17	□□□□□ -0.78
NUP85-223	ENST00000583877	NSUN3	Q9H649	340 aa	Known RBP	10.17	□□□□□ -0.78
NUP85-223	ENST00000583877	KAT14	Q9H8E8	782 aa		10.17	□□□□□ -0.78
NUP85-223	ENST00000583877	JMJD4	Q9H9V9	463 aa		10.17	□□□□□ -0.78
NUP85-223	ENST00000583877	DMD	P11532	3685 aa		10.17	□□□□□ -0.78
NUP85-223	ENST00000583877	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	10.17	□□□□□ -0.78
NUP85-223	ENST00000583877	WDR81	Q562E7	1941 aa		10.16	□□□□□ -0.78
NUP85-223	ENST00000583877	C17orf102	A2RUQ5	167 aa		10.16	□□□□□ -0.78
NUP85-223	ENST00000583877		H3BRB1	525 aa		10.16	□□□□□ -0.78
NUP85-223	ENST00000583877	ZNF213	O14771	459 aa		10.16	□□□□□ -0.78
NUP85-223	ENST00000583877	OPLAH	O14841	1288 aa		10.16	□□□□□ -0.78
NUP85-223	ENST00000583877	GGPS1	O95749	300 aa		10.16	□□□□□ -0.78
NUP85-223	ENST00000583877	PARP1	P09874	1014 aa	Known RBP	10.16	□□□□□ -0.78
NUP85-223	ENST00000583877	MFAP1	P55081	439 aa	Known RBP	10.16	□□□□□ -0.78
NUP85-223	ENST00000583877	IER5L	Q5T953	404 aa		10.16	□□□□□ -0.78
NUP85-223	ENST00000583877	ANKRD45	Q5TZF3	282 aa		10.16	□□□□□ -0.78
NUP85-223	ENST00000583877	ASTL	Q6HA08	431 aa	Predicted RBP	10.16	□□□□□ -0.78

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