RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 GGPS1O95749 300 aa12.37□□□□□ -0.43
TOP3A-216ENST00000583804 KCNA2P16389 499 aa12.37□□□□□ -0.43
TOP3A-216ENST00000583804 UBA1P22314 1058 aaKnown RBP12.37□□□□□ -0.43
TOP3A-216ENST00000583804 PTGS1P23219 599 aa12.37□□□□□ -0.43
TOP3A-216ENST00000583804 TXKP42681 527 aa12.37□□□□□ -0.43
TOP3A-216ENST00000583804 NEDD9Q14511 834 aa12.37□□□□□ -0.43
TOP3A-216ENST00000583804 MTFR1Q15390 333 aa12.37□□□□□ -0.43
TOP3A-216ENST00000583804 DUSP28Q4G0W2 176 aa12.37□□□□□ -0.43
TOP3A-216ENST00000583804 CLEC17AQ6ZS10 378 aa12.37□□□□□ -0.43
TOP3A-216ENST00000583804 CYFIP1Q7L576 1253 aa12.37□□□□□ -0.43
TOP3A-216ENST00000583804 DHX37Q8IY37 1157 aaKnown RBP12.37□□□□□ -0.43
TOP3A-216ENST00000583804 SLC5A5Q92911 643 aa12.37□□□□□ -0.43
TOP3A-216ENST00000583804 LENG1Q96BZ8 264 aaPredicted RBP12.37□□□□□ -0.43
TOP3A-216ENST00000583804 FAM20AQ96MK3 541 aa12.37□□□□□ -0.43
TOP3A-216ENST00000583804 CLIC6Q96NY7 704 aa12.37□□□□□ -0.43
TOP3A-216ENST00000583804 SDF4Q9BRK5 362 aa12.37□□□□□ -0.43
TOP3A-216ENST00000583804 BCAS3Q9H6U6 928 aa12.37□□□□□ -0.43
TOP3A-216ENST00000583804 MLXIPQ9HAP2 919 aa12.37□□□□□ -0.43
TOP3A-216ENST00000583804 TCEAL9Q9UHQ7 104 aa12.37□□□□□ -0.43
TOP3A-216ENST00000583804 SPTLC2O15270 562 aa12.36□□□□□ -0.43
TOP3A-216ENST00000583804 DYNC1LI2O43237 492 aaPredicted RBP12.36□□□□□ -0.43
TOP3A-216ENST00000583804 GAS7O60861 476 aa12.36□□□□□ -0.43
TOP3A-216ENST00000583804 BMP15O95972 392 aa12.36□□□□□ -0.43
TOP3A-216ENST00000583804 GH1P01241 217 aa12.36□□□□□ -0.43
TOP3A-216ENST00000583804 OR52Z1P0C646 297 aa12.36□□□□□ -0.43
TOP3A-216ENST00000583804 RARBP10826 455 aa12.36□□□□□ -0.43
TOP3A-216ENST00000583804 CCL5P13501 91 aa12.36□□□□□ -0.43
TOP3A-216ENST00000583804 SP4Q02446 784 aa12.36□□□□□ -0.43
TOP3A-216ENST00000583804 GRIN1Q05586 938 aa12.36□□□□□ -0.43
TOP3A-216ENST00000583804 ITGB3BPQ13352 177 aaPredicted RBP12.36□□□□□ -0.43
TOP3A-216ENST00000583804 PTPAQ15257 358 aa12.36□□□□□ -0.43
TOP3A-216ENST00000583804 SPECC1Q5M775 1068 aa12.36□□□□□ -0.43
TOP3A-216ENST00000583804 LRCH2Q5VUJ6 765 aa12.36□□□□□ -0.43
TOP3A-216ENST00000583804 ATL3Q6DD88 541 aa12.36□□□□□ -0.43
TOP3A-216ENST00000583804 SLFN12Q8IYM2 578 aa12.36□□□□□ -0.43
TOP3A-216ENST00000583804 C4orf32Q8N8J7 132 aa12.36□□□□□ -0.43
TOP3A-216ENST00000583804 LINC00301Q8NCQ3 95 aa12.36□□□□□ -0.43
TOP3A-216ENST00000583804 GIMAP8Q8ND71 665 aaPredicted RBP12.36□□□□□ -0.43
TOP3A-216ENST00000583804 OR6J1Q8NGC5 347 aa12.36□□□□□ -0.43
TOP3A-216ENST00000583804 ETNPPLQ8TBG4 499 aa12.36□□□□□ -0.43
TOP3A-216ENST00000583804 HAS1Q92839 578 aa12.36□□□□□ -0.43
TOP3A-216ENST00000583804 SENP7Q9BQF6 1050 aa12.36□□□□□ -0.43
TOP3A-216ENST00000583804 SCAND2PQ9GZW5 306 aaPredicted RBP12.36□□□□□ -0.43
TOP3A-216ENST00000583804 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.36□□□□□ -0.43
TOP3A-216ENST00000583804 AP5M1Q9H0R1 490 aa12.36□□□□□ -0.43
TOP3A-216ENST00000583804 RNF208Q9H0X6 261 aa12.36□□□□□ -0.43
TOP3A-216ENST00000583804 UNC93B1Q9H1C4 597 aa12.36□□□□□ -0.43
TOP3A-216ENST00000583804 KCNMB3Q9NPA1 279 aa12.36□□□□□ -0.43
TOP3A-216ENST00000583804 TBC1D22BQ9NU19 505 aa12.36□□□□□ -0.43
TOP3A-216ENST00000583804 POLR3EQ9NVU0 708 aa12.36□□□□□ -0.43
TOP3A-216ENST00000583804 LRRC37A2A6NM11 1700 aa12.36□□□□□ -0.43
TOP3A-216ENST00000583804 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.35□□□□□ -0.43
TOP3A-216ENST00000583804 TBX3O15119 743 aa12.35□□□□□ -0.43
TOP3A-216ENST00000583804 NKRFO15226 690 aaKnown RBP eCLIP12.35□□□□□ -0.43
TOP3A-216ENST00000583804 ADCY6O43306 1168 aa12.35□□□□□ -0.43
TOP3A-216ENST00000583804 MYCNP04198 464 aaPredicted RBP12.35□□□□□ -0.43
TOP3A-216ENST00000583804 NASPP49321 788 aaPredicted RBP12.35□□□□□ -0.43
TOP3A-216ENST00000583804 LAMC2Q13753 1193 aa12.35□□□□□ -0.43
TOP3A-216ENST00000583804 CSPP1Q1MSJ5 1256 aa12.35□□□□□ -0.43
TOP3A-216ENST00000583804 CELF3Q5SZQ8 465 aaKnown RBP12.35□□□□□ -0.43
TOP3A-216ENST00000583804 DTHD1Q6ZMT9 781 aa12.35□□□□□ -0.43
TOP3A-216ENST00000583804 ARMC5Q96C12 935 aa12.35□□□□□ -0.43
TOP3A-216ENST00000583804 MTMR9Q96QG7 549 aa12.35□□□□□ -0.43
TOP3A-216ENST00000583804 RIT2Q99578 217 aa12.35□□□□□ -0.43
TOP3A-216ENST00000583804 TEKT3Q9BXF9 490 aa12.35□□□□□ -0.43
TOP3A-216ENST00000583804 TTC12Q9H892 705 aaPredicted RBP12.35□□□□□ -0.43
TOP3A-216ENST00000583804 JPH1Q9HDC5 661 aaPredicted RBP12.35□□□□□ -0.43
TOP3A-216ENST00000583804 DDX20Q9UHI6 824 aaKnown RBP12.35□□□□□ -0.43
TOP3A-216ENST00000583804 PCDHA12Q9UN75 941 aa12.35□□□□□ -0.43
TOP3A-216ENST00000583804 GOLGA6L4A6NEF3 574 aa12.34□□□□□ -0.43
TOP3A-216ENST00000583804 LAD1O00515 517 aa12.34□□□□□ -0.43
TOP3A-216ENST00000583804 NOP56O00567 594 aaKnown RBP12.34□□□□□ -0.43
TOP3A-216ENST00000583804 DHX15O43143 795 aaKnown RBP12.34□□□□□ -0.43
TOP3A-216ENST00000583804 CHMP2AO43633 222 aa12.34□□□□□ -0.43
TOP3A-216ENST00000583804 MSCO60682 206 aa12.34□□□□□ -0.43
TOP3A-216ENST00000583804 DUSP11O75319 330 aaKnown RBP12.34□□□□□ -0.43
TOP3A-216ENST00000583804 NFASCO94856 1347 aa12.34□□□□□ -0.43
TOP3A-216ENST00000583804 YEATS4O95619 227 aa12.34□□□□□ -0.43
TOP3A-216ENST00000583804 TECP42680 631 aa12.34□□□□□ -0.43
TOP3A-216ENST00000583804 ATP2C1P98194 919 aaPredicted RBP12.34□□□□□ -0.43
TOP3A-216ENST00000583804 ARHGAP1Q07960 439 aa12.34□□□□□ -0.43
TOP3A-216ENST00000583804 SLC39A14Q15043 492 aa12.34□□□□□ -0.43
TOP3A-216ENST00000583804 TMEM266Q2M3C6 531 aa12.34□□□□□ -0.43
TOP3A-216ENST00000583804 METTL7BQ6UX53 244 aa12.34□□□□□ -0.43
TOP3A-216ENST00000583804 TLK2Q86UE8 772 aa12.34□□□□□ -0.43
TOP3A-216ENST00000583804 ZNF333Q96JL9 665 aa12.34□□□□□ -0.43
TOP3A-216ENST00000583804 SPATA33Q96N06 139 aa12.34□□□□□ -0.43
TOP3A-216ENST00000583804 DEFB118Q96PH6 123 aa12.34□□□□□ -0.43
TOP3A-216ENST00000583804 SPC25Q9HBM1 224 aa12.34□□□□□ -0.43
TOP3A-216ENST00000583804 XPNPEP3Q9NQH7 507 aa12.34□□□□□ -0.43
TOP3A-216ENST00000583804 RCOR1Q9UKL0 485 aa12.34□□□□□ -0.43
TOP3A-216ENST00000583804 PCDHA7Q9UN72 937 aa12.34□□□□□ -0.43
TOP3A-216ENST00000583804 GNEQ9Y223 722 aaKnown RBP12.34□□□□□ -0.43
TOP3A-216ENST00000583804 KIAA1217Q5T5P2 1943 aa12.34□□□□□ -0.43
TOP3A-216ENST00000583804 VWA3AA6NCI4 1184 aa12.34□□□□□ -0.43
TOP3A-216ENST00000583804 PSMD10O75832 226 aa12.34□□□□□ -0.43
TOP3A-216ENST00000583804 FARP2O94887 1054 aaPredicted RBP12.34□□□□□ -0.43
TOP3A-216ENST00000583804 PGK1P00558 417 aa12.34□□□□□ -0.43
TOP3A-216ENST00000583804 C6orf222P0C671 652 aaPredicted RBP12.34□□□□□ -0.43
TOP3A-216ENST00000583804 TMEM87AQ8NBN3 555 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms