RNA–Protein interactions for RNA: ENST00000583439.1

DHX40-209, Transcript of DEAH-box helicase 40, humanhuman

TSL 3

Gene DHX40, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40-209ENST00000583439 PRR31Q5SQ13 230 aa5.65□□□□□ -1.5
DHX40-209ENST00000583439 PHF19Q5T6S3 580 aa5.65□□□□□ -1.5
DHX40-209ENST00000583439 VASNQ6EMK4 673 aa5.65□□□□□ -1.5
DHX40-209ENST00000583439 CELF2-AS1Q8N7Q2 184 aa5.65□□□□□ -1.5
DHX40-209ENST00000583439 C1orf159Q96HA4 380 aa5.65□□□□□ -1.5
DHX40-209ENST00000583439 SAMD11Q96NU1 681 aa5.65□□□□□ -1.5
DHX40-209ENST00000583439 RBM15Q96T37 977 aaKnown RBP eCLIP5.65□□□□□ -1.5
DHX40-209ENST00000583439 RBPJLQ9UBG7 517 aa5.65□□□□□ -1.5
DHX40-209ENST00000583439 PPARGC1AQ9UBK2 798 aaKnown RBP5.65□□□□□ -1.5
DHX40-209ENST00000583439 ST6GALNAC2Q9UJ37 374 aa5.65□□□□□ -1.5
DHX40-209ENST00000583439 C9orf118A6NHY6 69 aa5.64□□□□□ -1.51
DHX40-209ENST00000583439 SUV39H1O43463 412 aa5.64□□□□□ -1.51
DHX40-209ENST00000583439 LAMTOR5O43504 91 aa5.64□□□□□ -1.51
DHX40-209ENST00000583439 DLX3O60479 287 aa5.64□□□□□ -1.51
DHX40-209ENST00000583439 B4GALT4O60513 344 aa5.64□□□□□ -1.51
DHX40-209ENST00000583439 MSCO60682 206 aa5.64□□□□□ -1.51
DHX40-209ENST00000583439 FBXO21O94952 628 aa5.64□□□□□ -1.51
DHX40-209ENST00000583439 COL6A2P12110 1019 aa5.64□□□□□ -1.51
DHX40-209ENST00000583439 ZNF28P17035 718 aa5.64□□□□□ -1.51
DHX40-209ENST00000583439 SPIRE1Q08AE8 756 aa5.64□□□□□ -1.51
DHX40-209ENST00000583439 TESK1Q15569 626 aa5.64□□□□□ -1.51
DHX40-209ENST00000583439 DDR2Q16832 855 aa5.64□□□□□ -1.51
DHX40-209ENST00000583439 EMC4Q5J8M3 183 aa5.64□□□□□ -1.51
DHX40-209ENST00000583439 CPZQ66K79 652 aa5.64□□□□□ -1.51
DHX40-209ENST00000583439 ARHGEF18Q6ZSZ5 1173 aa5.64□□□□□ -1.51
DHX40-209ENST00000583439 ZNF428Q96B54 188 aa5.64□□□□□ -1.51
DHX40-209ENST00000583439 TINF2Q9BSI4 451 aa5.64□□□□□ -1.51
DHX40-209ENST00000583439 AARSD1Q9BTE6 412 aaKnown RBP5.64□□□□□ -1.51
DHX40-209ENST00000583439 TRIM55Q9BYV6 548 aa5.64□□□□□ -1.51
DHX40-209ENST00000583439 BARX1Q9HBU1 254 aaPredicted RBP5.64□□□□□ -1.51
DHX40-209ENST00000583439 GPR27Q9NS67 375 aa5.64□□□□□ -1.51
DHX40-209ENST00000583439 ASH2LQ9UBL3 628 aa5.64□□□□□ -1.51
DHX40-209ENST00000583439 B4GALT3O60512 393 aa5.63□□□□□ -1.51
DHX40-209ENST00000583439 RBM25P49756 843 aaKnown RBP5.63□□□□□ -1.51
DHX40-209ENST00000583439 IFRD2Q12894 506 aaPredicted RBP5.63□□□□□ -1.51
DHX40-209ENST00000583439 NSMFQ6X4W1 530 aa5.63□□□□□ -1.51
DHX40-209ENST00000583439 KBTBD2Q8IY47 623 aa5.63□□□□□ -1.51
DHX40-209ENST00000583439 KISS1RQ969F8 398 aaPredicted RBP5.63□□□□□ -1.51
DHX40-209ENST00000583439 SLC6A20Q9NP91 592 aa5.63□□□□□ -1.51
DHX40-209ENST00000583439 NUB1Q9Y5A7 615 aa5.63□□□□□ -1.51
DHX40-209ENST00000583439 NPFFR2Q9Y5X5 522 aa5.63□□□□□ -1.51
DHX40-209ENST00000583439 BLACEA4D250 179 aa5.62□□□□□ -1.51
DHX40-209ENST00000583439 ZNF20P17024 532 aa5.62□□□□□ -1.51
DHX40-209ENST00000583439 GRK2P25098 689 aa5.62□□□□□ -1.51
DHX40-209ENST00000583439 GRK3P35626 688 aa5.62□□□□□ -1.51
DHX40-209ENST00000583439 GLRBP48167 497 aa5.62□□□□□ -1.51
DHX40-209ENST00000583439 TUSC3Q13454 348 aa5.62□□□□□ -1.51
DHX40-209ENST00000583439 KCNT2Q6UVM3 1135 aa5.62□□□□□ -1.51
DHX40-209ENST00000583439 DCAF4Q8WV16 495 aa5.62□□□□□ -1.51
DHX40-209ENST00000583439 SGSM3Q96HU1 749 aa5.62□□□□□ -1.51
DHX40-209ENST00000583439 YTHDC1Q96MU7 727 aaKnown RBP5.62□□□□□ -1.51
DHX40-209ENST00000583439 DEF6Q9H4E7 631 aa5.62□□□□□ -1.51
DHX40-209ENST00000583439 U2SURPO15042 1029 aaKnown RBP5.61□□□□□ -1.51
DHX40-209ENST00000583439 LTFP02788 710 aa5.61□□□□□ -1.51
DHX40-209ENST00000583439 PABPC1P11940 636 aaKnown RBP5.61□□□□□ -1.51
DHX40-209ENST00000583439 PPP2CBP62714 309 aa5.61□□□□□ -1.51
DHX40-209ENST00000583439 PPP2CAP67775 309 aa5.61□□□□□ -1.51
DHX40-209ENST00000583439 KIZQ2M2Z5 673 aa5.61□□□□□ -1.51
DHX40-209ENST00000583439 CYP4F22Q6NT55 531 aa5.61□□□□□ -1.51
DHX40-209ENST00000583439 RSPO2Q6UXX9 243 aaPredicted RBP5.61□□□□□ -1.51
DHX40-209ENST00000583439 OTOP3Q7RTS5 596 aa5.61□□□□□ -1.51
DHX40-209ENST00000583439 CIR1Q86X95 450 aaPredicted RBP5.61□□□□□ -1.51
DHX40-209ENST00000583439 TTC9BQ8N6N2 239 aa5.61□□□□□ -1.51
DHX40-209ENST00000583439 IGDCC4Q8TDY8 1250 aa5.61□□□□□ -1.51
DHX40-209ENST00000583439 CLEC4DQ8WXI8 215 aa5.61□□□□□ -1.51
DHX40-209ENST00000583439 ZCCHC14Q8WYQ9 949 aaKnown RBP5.61□□□□□ -1.51
DHX40-209ENST00000583439 ALG1Q9BT22 464 aa5.61□□□□□ -1.51
DHX40-209ENST00000583439 TRAV20A0A0B4J274 112 aa5.6□□□□□ -1.51
DHX40-209ENST00000583439 CCDC85CA6NKD9 419 aa5.6□□□□□ -1.51
DHX40-209ENST00000583439 CKMP06732 381 aa5.6□□□□□ -1.51
DHX40-209ENST00000583439 NFATC3Q12968 1075 aa5.6□□□□□ -1.51
DHX40-209ENST00000583439 PAN2Q504Q3 1202 aaKnown RBP5.6□□□□□ -1.51
DHX40-209ENST00000583439 LBX2Q6XYB7 198 aa5.6□□□□□ -1.51
DHX40-209ENST00000583439 EP400NLQ6ZTU2 488 aa5.6□□□□□ -1.51
DHX40-209ENST00000583439 IFNL3Q8IZI9 196 aa5.6□□□□□ -1.51
DHX40-209ENST00000583439 LRRC47Q8N1G4 583 aaKnown RBP5.6□□□□□ -1.51
DHX40-209ENST00000583439 KLHL36Q8N4N3 616 aa5.6□□□□□ -1.51
DHX40-209ENST00000583439 DVL3Q92997 716 aaPredicted RBP5.6□□□□□ -1.51
DHX40-209ENST00000583439 IPO9Q96P70 1041 aaKnown RBP5.6□□□□□ -1.51
DHX40-209ENST00000583439 CDC6Q99741 560 aa5.6□□□□□ -1.51
DHX40-209ENST00000583439 PPP4R1LQ9P1A2 415 aa5.6□□□□□ -1.51
DHX40-209ENST00000583439 ARHGAP20Q9P2F6 1191 aa5.6□□□□□ -1.51
DHX40-209ENST00000583439 DSEQ9UL01 958 aa5.6□□□□□ -1.51
DHX40-209ENST00000583439 WASF3Q9UPY6 502 aa5.6□□□□□ -1.51
DHX40-209ENST00000583439 FAM47E-STBD1D6RA91 191 aa5.59□□□□□ -1.51
DHX40-209ENST00000583439 FSHBP01225 129 aa5.59□□□□□ -1.51
DHX40-209ENST00000583439 SOD2P04179 222 aa5.59□□□□□ -1.51
DHX40-209ENST00000583439 FGFR1P11362 822 aa5.59□□□□□ -1.51
DHX40-209ENST00000583439 GPR85P60893 370 aa5.59□□□□□ -1.51
DHX40-209ENST00000583439 ZXDAP98168 799 aa5.59□□□□□ -1.51
DHX40-209ENST00000583439 SMAD2Q15796 467 aaKnown RBP5.59□□□□□ -1.51
DHX40-209ENST00000583439 SKIDA1Q1XH10 827 aa5.59□□□□□ -1.51
DHX40-209ENST00000583439 ZNF585AQ6P3V2 769 aa5.59□□□□□ -1.51
DHX40-209ENST00000583439 DPH6Q7L8W6 267 aa5.59□□□□□ -1.51
DHX40-209ENST00000583439 RALYLQ86SE5 291 aaKnown RBP5.59□□□□□ -1.51
DHX40-209ENST00000583439 PALM2Q8IXS6 379 aa5.59□□□□□ -1.51
DHX40-209ENST00000583439 SH3RF3Q8TEJ3 882 aaPredicted RBP5.59□□□□□ -1.51
DHX40-209ENST00000583439 CDIP1Q9H305 208 aa5.59□□□□□ -1.51
DHX40-209ENST00000583439 DLL4Q9NR61 685 aa5.59□□□□□ -1.51
DHX40-209ENST00000583439 ARHGEF4Q9NR80 690 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms