RNA–Protein interactions for RNA: ENST00000582797.5

IFT20-212, Transcript of intraflagellar transport 20, humanhuman

TSL 2

Gene IFT20, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-212ENST00000582797 C17orf102A2RUQ5 167 aa17.69■□□□□ 0.42
IFT20-212ENST00000582797 TREHO43280 583 aa17.69■□□□□ 0.42
IFT20-212ENST00000582797 EIF3JO75822 258 aaKnown RBP17.69■□□□□ 0.42
IFT20-212ENST00000582797 RB1P06400 928 aa17.69■□□□□ 0.42
IFT20-212ENST00000582797 BMPR1AP36894 532 aa17.69■□□□□ 0.42
IFT20-212ENST00000582797 PKN1Q16512 942 aa17.69■□□□□ 0.42
IFT20-212ENST00000582797 ARHGEF16Q5VV41 709 aa17.69■□□□□ 0.42
IFT20-212ENST00000582797 MYSM1Q5VVJ2 828 aa17.69■□□□□ 0.42
IFT20-212ENST00000582797 MSLNLQ96KJ4 702 aa17.69■□□□□ 0.42
IFT20-212ENST00000582797 C16orf70Q9BSU1 422 aa17.69■□□□□ 0.42
IFT20-212ENST00000582797 RIF1Q5UIP0 2472 aaKnown RBP17.69■□□□□ 0.42
IFT20-212ENST00000582797 LOC730098B7Z3J9 87 aa17.68■□□□□ 0.42
IFT20-212ENST00000582797 PPFIA4O75335 1185 aa17.68■□□□□ 0.42
IFT20-212ENST00000582797 NDUFV1P49821 464 aa17.68■□□□□ 0.42
IFT20-212ENST00000582797 HNRNPUQ00839 825 aaKnown RBP eCLIP17.68■□□□□ 0.42
IFT20-212ENST00000582797 ADAM15Q13444 863 aa17.68■□□□□ 0.42
IFT20-212ENST00000582797 CAMK1Q14012 370 aa17.68■□□□□ 0.42
IFT20-212ENST00000582797 CDC37Q16543 378 aaPredicted RBP17.68■□□□□ 0.42
IFT20-212ENST00000582797 KAT6AQ92794 2004 aa17.68■□□□□ 0.42
IFT20-212ENST00000582797 ATOH1Q92858 354 aaPredicted RBP17.68■□□□□ 0.42
IFT20-212ENST00000582797 SPATA33Q96N06 139 aa17.68■□□□□ 0.42
IFT20-212ENST00000582797 TCP11L1Q9NUJ3 509 aa17.68■□□□□ 0.42
IFT20-212ENST00000582797 ABCB11O95342 1321 aa17.68■□□□□ 0.42
IFT20-212ENST00000582797 ADGRA3Q8IWK6 1321 aa17.68■□□□□ 0.42
IFT20-212ENST00000582797 RGS20O76081 388 aa17.67■□□□□ 0.42
IFT20-212ENST00000582797 GGPS1O95749 300 aa17.67■□□□□ 0.42
IFT20-212ENST00000582797 MMP1P03956 469 aa17.67■□□□□ 0.42
IFT20-212ENST00000582797 NR3C2P08235 984 aa17.67■□□□□ 0.42
IFT20-212ENST00000582797 SMIM10L2AP0DMW4 78 aa17.67■□□□□ 0.42
IFT20-212ENST00000582797 SMIM10L2BP0DMW5 78 aa17.67■□□□□ 0.42
IFT20-212ENST00000582797 HOXC8P31273 242 aa17.67■□□□□ 0.42
IFT20-212ENST00000582797 FOXK2Q01167 660 aa17.67■□□□□ 0.42
IFT20-212ENST00000582797 PI4K2BQ8TCG2 481 aa17.67■□□□□ 0.42
IFT20-212ENST00000582797 PXMP2Q9NR77 195 aa17.67■□□□□ 0.42
IFT20-212ENST00000582797 CLEC1BQ9P126 229 aa17.67■□□□□ 0.42
IFT20-212ENST00000582797 TTC3P53804 2025 aa17.67■□□□□ 0.42
IFT20-212ENST00000582797 EYA4O95677 639 aa17.66■□□□□ 0.42
IFT20-212ENST00000582797 RRP1P56182 461 aaKnown RBP17.66■□□□□ 0.42
IFT20-212ENST00000582797 SP2Q02086 613 aa17.66■□□□□ 0.42
IFT20-212ENST00000582797 CELF3Q5SZQ8 465 aaKnown RBP17.66■□□□□ 0.42
IFT20-212ENST00000582797 ADGRD2Q7Z7M1 963 aa17.66■□□□□ 0.42
IFT20-212ENST00000582797 OTUD7AQ8TE49 926 aaPredicted RBP17.66■□□□□ 0.42
IFT20-212ENST00000582797 RNPEPQ9H4A4 650 aa17.66■□□□□ 0.42
IFT20-212ENST00000582797 RC3H2Q9HBD1 1191 aaKnown RBP17.66■□□□□ 0.42
IFT20-212ENST00000582797 LOXHD1Q8IVV2 1947 aa17.66■□□□□ 0.42
IFT20-212ENST00000582797 FAM186AA6NE01 2351 aa17.66■□□□□ 0.42
IFT20-212ENST00000582797 H3BRB1 525 aa17.65■□□□□ 0.42
IFT20-212ENST00000582797 MYCLP12524 364 aaPredicted RBP17.65■□□□□ 0.42
IFT20-212ENST00000582797 UBA1P22314 1058 aaKnown RBP17.65■□□□□ 0.42
IFT20-212ENST00000582797 DNAJB1P25685 340 aa17.65■□□□□ 0.42
IFT20-212ENST00000582797 SIGLEC14Q08ET2 396 aa17.65■□□□□ 0.42
IFT20-212ENST00000582797 CBX2Q14781 532 aaPredicted RBP17.65■□□□□ 0.42
IFT20-212ENST00000582797 MCF2L2Q86YR7 1114 aa17.65■□□□□ 0.42
IFT20-212ENST00000582797 SMRP1Q8NCR6 262 aa17.65■□□□□ 0.42
IFT20-212ENST00000582797 CLP1Q92989 425 aaKnown RBP17.65■□□□□ 0.42
IFT20-212ENST00000582797 ASIC4Q96FT7 647 aa17.65■□□□□ 0.42
IFT20-212ENST00000582797 ZFP91Q96JP5 570 aaPredicted RBP17.65■□□□□ 0.42
IFT20-212ENST00000582797 TUT1Q9H6E5 874 aaKnown RBP17.65■□□□□ 0.42
IFT20-212ENST00000582797 BCAS3Q9H6U6 928 aa17.65■□□□□ 0.42
IFT20-212ENST00000582797 H0Y858 1186 aa17.64■□□□□ 0.41
IFT20-212ENST00000582797 CAND2O75155 1236 aa17.64■□□□□ 0.41
IFT20-212ENST00000582797 AVPR2P30518 371 aa17.64■□□□□ 0.41
IFT20-212ENST00000582797 QRICH1Q2TAL8 776 aa17.64■□□□□ 0.41
IFT20-212ENST00000582797 GPATCH4Q5T3I0 446 aaKnown RBP17.64■□□□□ 0.41
IFT20-212ENST00000582797 ADGRF4Q8IZF3 695 aa17.64■□□□□ 0.41
IFT20-212ENST00000582797 APBB2Q92870 758 aa17.64■□□□□ 0.41
IFT20-212ENST00000582797 GPKOWQ92917 476 aaPredicted RBP eCLIP17.64■□□□□ 0.41
IFT20-212ENST00000582797 ZKSCAN3Q9BRR0 538 aa17.64■□□□□ 0.41
IFT20-212ENST00000582797 MAF1Q9H063 256 aa17.64■□□□□ 0.41
IFT20-212ENST00000582797 TLR9Q9NR96 1032 aa17.64■□□□□ 0.41
IFT20-212ENST00000582797 SETD4Q9NVD3 440 aa17.64■□□□□ 0.41
IFT20-212ENST00000582797 BARX2Q9UMQ3 279 aaPredicted RBP17.64■□□□□ 0.41
IFT20-212ENST00000582797 RWDD3Q9Y3V2 267 aa17.64■□□□□ 0.41
IFT20-212ENST00000582797 USP15Q9Y4E8 981 aaPredicted RBP17.64■□□□□ 0.41
IFT20-212ENST00000582797 SUPT16HQ9Y5B9 1047 aaKnown RBP17.64■□□□□ 0.41
IFT20-212ENST00000582797 TTC41PQ6P2S7 1318 aa17.64■□□□□ 0.41
IFT20-212ENST00000582797 LAMA4Q16363 1823 aa17.63■□□□□ 0.41
IFT20-212ENST00000582797 CFBP00751 764 aa17.63■□□□□ 0.41
IFT20-212ENST00000582797 FGAP02671 866 aa17.63■□□□□ 0.41
IFT20-212ENST00000582797 LGALS2P05162 132 aa17.63■□□□□ 0.41
IFT20-212ENST00000582797 HSPD1P10809 573 aaKnown RBP17.63■□□□□ 0.41
IFT20-212ENST00000582797 HAND2P61296 217 aa17.63■□□□□ 0.41
IFT20-212ENST00000582797 BTG3Q14201 252 aaPredicted RBP17.63■□□□□ 0.41
IFT20-212ENST00000582797 ASCL5Q7RTU5 278 aa17.63■□□□□ 0.41
IFT20-212ENST00000582797 IL31RAQ8NI17 732 aa17.63■□□□□ 0.41
IFT20-212ENST00000582797 RPGRIP1Q96KN7 1286 aa17.63■□□□□ 0.41
IFT20-212ENST00000582797 TTC14Q96N46 770 aa17.63■□□□□ 0.41
IFT20-212ENST00000582797 CHMP4BQ9H444 224 aaKnown RBP17.63■□□□□ 0.41
IFT20-212ENST00000582797 DCTPP1Q9H773 170 aa17.63■□□□□ 0.41
IFT20-212ENST00000582797 PLAGL2Q9UPG8 496 aa17.63■□□□□ 0.41
IFT20-212ENST00000582797 OPLAHO14841 1288 aa17.62■□□□□ 0.41
IFT20-212ENST00000582797 GLP2RO95838 553 aa17.62■□□□□ 0.41
IFT20-212ENST00000582797 PDGFBP01127 241 aaPredicted RBP17.62■□□□□ 0.41
IFT20-212ENST00000582797 NRIP1P48552 1158 aa17.62■□□□□ 0.41
IFT20-212ENST00000582797 COASYQ13057 564 aa17.62■□□□□ 0.41
IFT20-212ENST00000582797 ALX1Q15699 326 aa17.62■□□□□ 0.41
IFT20-212ENST00000582797 RBM23Q86U06 439 aaKnown RBP17.62■□□□□ 0.41
IFT20-212ENST00000582797 EFHBQ8N7U6 833 aa17.62■□□□□ 0.41
IFT20-212ENST00000582797 PDCD2LQ9BRP1 358 aa17.62■□□□□ 0.41
IFT20-212ENST00000582797 MRPL11Q9Y3B7 192 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms