RNA–Protein interactions for RNA: ENST00000582717.5

GGA3-214, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-214ENST00000582717 CSRNP1Q96S65 589 aa15.08■□□□□ 0
GGA3-214ENST00000582717 NHEJ1Q9H9Q4 299 aaPredicted RBP15.08■□□□□ 0
GGA3-214ENST00000582717 ZNF277Q9NRM2 450 aaPredicted RBP15.08■□□□□ 0
GGA3-214ENST00000582717 SPDYE2BA6NHP3 402 aa15.08■□□□□ 0
GGA3-214ENST00000582717 OPA1O60313 960 aa15.08■□□□□ 0
GGA3-214ENST00000582717 GH2P01242 217 aa15.08■□□□□ 0
GGA3-214ENST00000582717 SPDYE6P0CI01 402 aa15.08■□□□□ 0
GGA3-214ENST00000582717 PPP1R2P41236 205 aa15.08■□□□□ 0
GGA3-214ENST00000582717 CDC37Q16543 378 aaPredicted RBP15.08■□□□□ 0
GGA3-214ENST00000582717 TTI2Q6NXR4 508 aa15.08■□□□□ 0
GGA3-214ENST00000582717 SUGP1Q8IWZ8 645 aaKnown RBP15.08■□□□□ 0
GGA3-214ENST00000582717 GIMAP8Q8ND71 665 aaPredicted RBP15.08■□□□□ 0
GGA3-214ENST00000582717 PSMD1Q99460 953 aa15.08■□□□□ 0
GGA3-214ENST00000582717 CUEDC2Q9H467 287 aa15.08■□□□□ 0
GGA3-214ENST00000582717 MAGEF1Q9HAY2 307 aa15.08■□□□□ 0
GGA3-214ENST00000582717 SNX12Q9UMY4 172 aa15.08■□□□□ 0
GGA3-214ENST00000582717 CLRN2A0PK11 232 aa15.07■□□□□ 0
GGA3-214ENST00000582717 BICDL2A1A5D9 508 aa15.07■□□□□ 0
GGA3-214ENST00000582717 TRIM49BA6NDI0 452 aa15.07■□□□□ 0
GGA3-214ENST00000582717 TCP10L2B9ZVM9 353 aa15.07■□□□□ 0
GGA3-214ENST00000582717 F5H6K3 240 aa15.07■□□□□ 0
GGA3-214ENST00000582717 FXR2P51116 673 aaKnown RBP eCLIP15.07■□□□□ 0
GGA3-214ENST00000582717 IRAK1P51617 712 aa15.07■□□□□ 0
GGA3-214ENST00000582717 MRPL12P52815 198 aaKnown RBP15.07■□□□□ 0
GGA3-214ENST00000582717 KLRC3Q07444 240 aa15.07■□□□□ 0
GGA3-214ENST00000582717 RTKN2Q8IZC4 609 aa15.07■□□□□ 0
GGA3-214ENST00000582717 LARGE2Q8N3Y3 721 aa15.07■□□□□ 0
GGA3-214ENST00000582717 GMLQ99445 158 aa15.07■□□□□ 0
GGA3-214ENST00000582717 TUBGCP2Q9BSJ2 902 aa15.07■□□□□ 0
GGA3-214ENST00000582717 LACRTQ9GZZ8 138 aa15.07■□□□□ 0
GGA3-214ENST00000582717 PSTPIP2Q9H939 334 aa15.07■□□□□ 0
GGA3-214ENST00000582717 JADE2Q9NQC1 790 aa15.07■□□□□ 0
GGA3-214ENST00000582717 ATF5Q9Y2D1 282 aaPredicted RBP15.07■□□□□ 0
GGA3-214ENST00000582717 PDE2AO00408 941 aaPredicted RBP15.06■□□□□ 0
GGA3-214ENST00000582717 EBAG9O00559 213 aa15.06■□□□□ 0
GGA3-214ENST00000582717 USO1O60763 962 aaKnown RBP15.06■□□□□ 0
GGA3-214ENST00000582717 TACC1O75410 805 aa15.06■□□□□ 0
GGA3-214ENST00000582717 NDUFB10O96000 172 aa15.06■□□□□ 0
GGA3-214ENST00000582717 SNAP25P60880 206 aa15.06■□□□□ 0
GGA3-214ENST00000582717 SPA17Q15506 151 aa15.06■□□□□ 0
GGA3-214ENST00000582717 RIN2Q8WYP3 895 aaPredicted RBP15.06■□□□□ 0
GGA3-214ENST00000582717 CCDC47Q96A33 483 aaKnown RBP15.06■□□□□ 0
GGA3-214ENST00000582717 SH3GL2Q99962 352 aa15.06■□□□□ 0
GGA3-214ENST00000582717 ZBTB12Q9Y330 459 aaPredicted RBP15.06■□□□□ 0
GGA3-214ENST00000582717 SHTN1A0MZ66 631 aa15.06■□□□□ 0
GGA3-214ENST00000582717 POTEMA6NI47 508 aa15.06■□□□□ 0
GGA3-214ENST00000582717 B4DLN1 442 aa15.06■□□□□ 0
GGA3-214ENST00000582717 USP17L15C9J2P7 530 aa15.06■□□□□ 0
GGA3-214ENST00000582717 USP17L13C9JLJ4 530 aa15.06■□□□□ 0
GGA3-214ENST00000582717 USP17L11C9JVI0 530 aa15.06■□□□□ 0
GGA3-214ENST00000582717 USP17L18D6R9N7 530 aa15.06■□□□□ 0
GGA3-214ENST00000582717 USP17L22D6RA61 530 aa15.06■□□□□ 0
GGA3-214ENST00000582717 USP17L17D6RBQ6 530 aa15.06■□□□□ 0
GGA3-214ENST00000582717 USP17L19D6RCP7 530 aa15.06■□□□□ 0
GGA3-214ENST00000582717 USP17L20D6RJB6 530 aa15.06■□□□□ 0
GGA3-214ENST00000582717 VIL1P09327 827 aaKnown RBP15.06■□□□□ 0
GGA3-214ENST00000582717 MYBL2P10244 700 aa15.06■□□□□ 0
GGA3-214ENST00000582717 EPB41P11171 864 aaKnown RBP15.06■□□□□ 0
GGA3-214ENST00000582717 GUCY2CP25092 1073 aa15.06■□□□□ 0
GGA3-214ENST00000582717 PMS1P54277 932 aaKnown RBP15.06■□□□□ 0
GGA3-214ENST00000582717 USP17L24Q0WX57 530 aa15.06■□□□□ 0
GGA3-214ENST00000582717 GRB10Q13322 594 aa15.06■□□□□ 0
GGA3-214ENST00000582717 ALS2CLQ60I27 953 aa15.06■□□□□ 0
GGA3-214ENST00000582717 USP17L6PQ6QN14 398 aa15.06■□□□□ 0
GGA3-214ENST00000582717 GMCL1P1Q8NEA9 526 aa15.06■□□□□ 0
GGA3-214ENST00000582717 TRIM9Q9C026 710 aa15.06■□□□□ 0
GGA3-214ENST00000582717 LRWD1Q9UFC0 647 aa15.06■□□□□ 0
GGA3-214ENST00000582717 PCDHA1Q9Y5I3 950 aa15.06■□□□□ 0
GGA3-214ENST00000582717 RCCD1A6NED2 376 aa15.05■□□□□ 0
GGA3-214ENST00000582717 ZMYND10O75800 440 aa15.05■□□□□ 0
GGA3-214ENST00000582717 C2orf54Q08AI8 447 aa15.05■□□□□ 0
GGA3-214ENST00000582717 TBC1D8BQ0IIM8 1120 aa15.05■□□□□ 0
GGA3-214ENST00000582717 GRIPAP1Q4V328 841 aa15.05■□□□□ 0
GGA3-214ENST00000582717 RBM26Q5T8P6 1007 aaKnown RBP15.05■□□□□ 0
GGA3-214ENST00000582717 PPP4R3AQ6IN85 833 aa15.05■□□□□ 0
GGA3-214ENST00000582717 EMBQ6PCB8 327 aa15.05■□□□□ 0
GGA3-214ENST00000582717 MMS22LQ6ZRQ5 1243 aa15.05■□□□□ 0
GGA3-214ENST00000582717 CREG2Q8IUH2 290 aa15.05■□□□□ 0
GGA3-214ENST00000582717 CSGALNACT2Q8N6G5 542 aa15.05■□□□□ 0
GGA3-214ENST00000582717 PNMA5Q96PV4 448 aa15.05■□□□□ 0
GGA3-214ENST00000582717 ERGIC2Q96RQ1 377 aa15.05■□□□□ 0
GGA3-214ENST00000582717 CAPS2Q9BXY5 557 aa15.05■□□□□ 0
GGA3-214ENST00000582717 DEF6Q9H4E7 631 aa15.05■□□□□ 0
GGA3-214ENST00000582717 PLEKHA4Q9H4M7 779 aa15.05■□□□□ 0
GGA3-214ENST00000582717 ZNF70Q9UC06 446 aaPredicted RBP15.05■□□□□ 0
GGA3-214ENST00000582717 KIF13BQ9NQT8 1826 aa15.05■□□□□ -0
GGA3-214ENST00000582717 A0A1W2PRG0 241 aa15.05■□□□□ -0
GGA3-214ENST00000582717 EIF3HO15372 352 aaKnown RBP eCLIP15.05■□□□□ -08e-7■■■■■ 29.8
GGA3-214ENST00000582717 CLSTN1O94985 981 aa15.05■□□□□ -0
GGA3-214ENST00000582717 TCP1P17987 556 aaKnown RBP15.05■□□□□ -0
GGA3-214ENST00000582717 TNFRSF8P28908 595 aa15.05■□□□□ -0
GGA3-214ENST00000582717 HNRNPH3P31942 346 aaKnown RBP15.05■□□□□ -0
GGA3-214ENST00000582717 BAG6P46379 1132 aa15.05■□□□□ -0
GGA3-214ENST00000582717 EPHB4P54760 987 aa15.05■□□□□ -0
GGA3-214ENST00000582717 TMEM266Q2M3C6 531 aa15.05■□□□□ -0
GGA3-214ENST00000582717 GSPT2Q8IYD1 628 aaKnown RBP15.05■□□□□ -0
GGA3-214ENST00000582717 PLCD3Q8N3E9 789 aa15.05■□□□□ -0
GGA3-214ENST00000582717 GJA10Q969M2 543 aa15.05■□□□□ -0
GGA3-214ENST00000582717 CALML4Q96GE6 196 aa15.05■□□□□ -0
GGA3-214ENST00000582717 GMCL1Q96IK5 515 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms