RNA–Protein interactions for RNA: ENST00000582453.5

MSI2-215, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-215	ENST00000582453	STEAP3	Q658P3	488 aa		4.61	□□□□□ -1.67
MSI2-215	ENST00000582453	CYP4F22	Q6NT55	531 aa		4.61	□□□□□ -1.67
MSI2-215	ENST00000582453	GIMAP6	Q6P9H5	292 aa		4.61	□□□□□ -1.67
MSI2-215	ENST00000582453	ETV3L	Q6ZN32	361 aa		4.61	□□□□□ -1.67
MSI2-215	ENST00000582453	MIB1	Q86YT6	1006 aa		4.61	□□□□□ -1.67
MSI2-215	ENST00000582453	SIAH1	Q8IUQ4	282 aa		4.61	□□□□□ -1.67
MSI2-215	ENST00000582453	TMEFF1	Q8IYR6	380 aa		4.61	□□□□□ -1.67
MSI2-215	ENST00000582453	FAM9A	Q8IZU1	332 aa	Predicted RBP	4.61	□□□□□ -1.67
MSI2-215	ENST00000582453	LILRB2	Q8N423	598 aa		4.61	□□□□□ -1.67
MSI2-215	ENST00000582453	DACT3	Q96B18	629 aa	Predicted RBP	4.61	□□□□□ -1.67
MSI2-215	ENST00000582453	IRF2BPL	Q9H1B7	796 aa		4.61	□□□□□ -1.67
MSI2-215	ENST00000582453	BCAS3	Q9H6U6	928 aa		4.61	□□□□□ -1.67
MSI2-215	ENST00000582453	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	4.61	□□□□□ -1.67
MSI2-215	ENST00000582453	SLC6A20	Q9NP91	592 aa		4.61	□□□□□ -1.67
MSI2-215	ENST00000582453	PPARGC1A	Q9UBK2	798 aa	Known RBP	4.61	□□□□□ -1.67
MSI2-215	ENST00000582453	UHRF1BP1L	A0JNW5	1464 aa		4.61	□□□□□ -1.67
MSI2-215	ENST00000582453	ARAP1	Q96P48	1450 aa		4.61	□□□□□ -1.67
MSI2-215	ENST00000582453	SAMD9	Q5K651	1589 aa		4.61	□□□□□ -1.67
MSI2-215	ENST00000582453	FAM47E-STBD1	D6RA91	191 aa		4.6	□□□□□ -1.67
MSI2-215	ENST00000582453	EFCAB14	O75071	495 aa		4.6	□□□□□ -1.67
MSI2-215	ENST00000582453	TADA3	O75528	432 aa		4.6	□□□□□ -1.67
MSI2-215	ENST00000582453	SOD2	P04179	222 aa		4.6	□□□□□ -1.67
MSI2-215	ENST00000582453	LIMS1	P48059	325 aa		4.6	□□□□□ -1.67
MSI2-215	ENST00000582453	FOXO4	P98177	505 aa		4.6	□□□□□ -1.67
MSI2-215	ENST00000582453	CAP1	Q01518	475 aa		4.6	□□□□□ -1.67
MSI2-215	ENST00000582453	SPIRE1	Q08AE8	756 aa		4.6	□□□□□ -1.67
MSI2-215	ENST00000582453	PAK1	Q13153	545 aa		4.6	□□□□□ -1.67
MSI2-215	ENST00000582453	TCERG1L	Q5VWI1	586 aa		4.6	□□□□□ -1.67
MSI2-215	ENST00000582453	KRTAP1-3	Q8IUG1	177 aa		4.6	□□□□□ -1.67
MSI2-215	ENST00000582453	FAM126B	Q8IXS8	530 aa		4.6	□□□□□ -1.67
MSI2-215	ENST00000582453	PHOSPHO1	Q8TCT1	267 aa		4.6	□□□□□ -1.67
MSI2-215	ENST00000582453	JAM3	Q9BX67	310 aa		4.6	□□□□□ -1.67
MSI2-215	ENST00000582453	SMOC1	Q9H4F8	434 aa		4.6	□□□□□ -1.67
MSI2-215	ENST00000582453	PCDH18	Q9HCL0	1135 aa		4.6	□□□□□ -1.67
MSI2-215	ENST00000582453	NGRN	Q9NPE2	291 aa	Known RBP	4.6	□□□□□ -1.67
MSI2-215	ENST00000582453	TRAF6	Q9Y4K3	522 aa		4.6	□□□□□ -1.67
MSI2-215	ENST00000582453	PCDHB4	Q9Y5E5	795 aa		4.6	□□□□□ -1.67
MSI2-215	ENST00000582453	PTCH2	Q9Y6C5	1203 aa		4.6	□□□□□ -1.67
MSI2-215	ENST00000582453	PTPRG	P23470	1445 aa		4.6	□□□□□ -1.67
MSI2-215	ENST00000582453	RIMBP3C	A6NJZ7	1639 aa		4.6	□□□□□ -1.67
MSI2-215	ENST00000582453	RIMBP3B	A6NNM3	1639 aa		4.6	□□□□□ -1.67
MSI2-215	ENST00000582453	KIAA0556	O60303	1618 aa		4.6	□□□□□ -1.67
MSI2-215	ENST00000582453	RIMBP3	Q9UFD9	1639 aa		4.6	□□□□□ -1.67
MSI2-215	ENST00000582453	TCRBV5S2	A0A599	114 aa		4.59	□□□□□ -1.67
MSI2-215	ENST00000582453	WNT9A	O14904	365 aa		4.59	□□□□□ -1.67
MSI2-215	ENST00000582453	SMARCA5	O60264	1052 aa	Predicted RBP	4.59	□□□□□ -1.67
MSI2-215	ENST00000582453	ZSCAN22	P10073	491 aa	Predicted RBP	4.59	□□□□□ -1.67
MSI2-215	ENST00000582453	CYP2C8	P10632	490 aa		4.59	□□□□□ -1.67
MSI2-215	ENST00000582453	MC3R	P41968	323 aa		4.59	□□□□□ -1.67
MSI2-215	ENST00000582453	AFF3	P51826	1226 aa	Known RBP	4.59	□□□□□ -1.67
MSI2-215	ENST00000582453	ADAMTS20	P59510	1910 aa		4.59	□□□□□ -1.67
MSI2-215	ENST00000582453	TRIM61	Q5EBN2	209 aa		4.59	□□□□□ -1.67
MSI2-215	ENST00000582453	OTOP3	Q7RTS5	596 aa		4.59	□□□□□ -1.67
MSI2-215	ENST00000582453	MTDH	Q86UE4	582 aa	Known RBP	4.59	□□□□□ -1.67
MSI2-215	ENST00000582453	ZC3H18	Q86VM9	953 aa	Known RBP	4.59	□□□□□ -1.67
MSI2-215	ENST00000582453	TRIM48	Q8IWZ4	208 aa		4.59	□□□□□ -1.67
MSI2-215	ENST00000582453	SMARCC2	Q8TAQ2	1214 aa		4.59	□□□□□ -1.67
MSI2-215	ENST00000582453	PANK1	Q8TE04	598 aa		4.59	□□□□□ -1.67
MSI2-215	ENST00000582453	PWWP2A	Q96N64	755 aa		4.59	□□□□□ -1.67
MSI2-215	ENST00000582453	YIPF4	Q9BSR8	244 aa		4.59	□□□□□ -1.67
MSI2-215	ENST00000582453	MRPL4	Q9BYD3	311 aa	Known RBP	4.59	□□□□□ -1.67
MSI2-215	ENST00000582453	IPPK	Q9H8X2	491 aa		4.59	□□□□□ -1.67
MSI2-215	ENST00000582453	MYOT	Q9UBF9	498 aa		4.59	□□□□□ -1.67
MSI2-215	ENST00000582453	NUB1	Q9Y5A7	615 aa		4.59	□□□□□ -1.67
MSI2-215	ENST00000582453	CTTNBP2	Q8WZ74	1663 aa		4.58	□□□□□ -1.68
MSI2-215	ENST00000582453	ERCC6L2	Q5T890	1561 aa		4.58	□□□□□ -1.68
MSI2-215	ENST00000582453	ARHGAP35	Q9NRY4	1499 aa		4.58	□□□□□ -1.68
MSI2-215	ENST00000582453	FMN1	Q68DA7	1419 aa		4.58	□□□□□ -1.68
MSI2-215	ENST00000582453	UACA	Q9BZF9	1416 aa		4.58	□□□□□ -1.68
MSI2-215	ENST00000582453	ARVCF	O00192	962 aa		4.58	□□□□□ -1.68
MSI2-215	ENST00000582453	KCNQ2	O43526	872 aa		4.58	□□□□□ -1.68
MSI2-215	ENST00000582453	APP	P05067	770 aa		4.58	□□□□□ -1.68
MSI2-215	ENST00000582453	C8B	P07358	591 aa		4.58	□□□□□ -1.68
MSI2-215	ENST00000582453	GNAT1	P11488	350 aa		4.58	□□□□□ -1.68
MSI2-215	ENST00000582453	HTRA3	P83110	453 aa		4.58	□□□□□ -1.68
MSI2-215	ENST00000582453	GUCY1A3	Q02108	690 aa		4.58	□□□□□ -1.68
MSI2-215	ENST00000582453	HABP4	Q5JVS0	413 aa	Known RBP	4.58	□□□□□ -1.68
MSI2-215	ENST00000582453	NOP9	Q86U38	636 aa	Known RBP	4.58	□□□□□ -1.68
MSI2-215	ENST00000582453	GSTCD	Q8NEC7	633 aa		4.58	□□□□□ -1.68
MSI2-215	ENST00000582453	TTLL11	Q8NHH1	800 aa		4.58	□□□□□ -1.68
MSI2-215	ENST00000582453	UHMK1	Q8TAS1	419 aa	Known RBP	4.58	□□□□□ -1.68
MSI2-215	ENST00000582453	PIP4K2C	Q8TBX8	421 aa		4.58	□□□□□ -1.68
MSI2-215	ENST00000582453	FNIP1	Q8TF40	1166 aa		4.58	□□□□□ -1.68
MSI2-215	ENST00000582453	DDX11	Q96FC9	970 aa		4.58	□□□□□ -1.68
MSI2-215	ENST00000582453	KCNJ15	Q99712	375 aa		4.58	□□□□□ -1.68
MSI2-215	ENST00000582453	SLC52A2	Q9HAB3	445 aa		4.58	□□□□□ -1.68
MSI2-215	ENST00000582453	DTL	Q9NZJ0	730 aa		4.58	□□□□□ -1.68
MSI2-215	ENST00000582453	SFMBT1	Q9UHJ3	866 aa		4.58	□□□□□ -1.68
MSI2-215	ENST00000582453	PCDHA8	Q9Y5H6	950 aa		4.58	□□□□□ -1.68
MSI2-215	ENST00000582453	PMF1-BGLAP	U3KQ54	211 aa		4.58	□□□□□ -1.68
MSI2-215	ENST00000582453	CLIP1	P30622	1438 aa		4.57	□□□□□ -1.68
MSI2-215	ENST00000582453	GSTA4	O15217	222 aa		4.57	□□□□□ -1.68
MSI2-215	ENST00000582453	CRTAM	O95727	393 aa		4.57	□□□□□ -1.68
MSI2-215	ENST00000582453	NKX3-2	P78367	333 aa		4.57	□□□□□ -1.68
MSI2-215	ENST00000582453	CD300LD	Q6UXZ3	194 aa		4.57	□□□□□ -1.68
MSI2-215	ENST00000582453	LCNL1	Q6ZST4	164 aa		4.57	□□□□□ -1.68
MSI2-215	ENST00000582453	LINC01356	Q8N9X3	169 aa		4.57	□□□□□ -1.68
MSI2-215	ENST00000582453	ARRDC4	Q8NCT1	418 aa		4.57	□□□□□ -1.68
MSI2-215	ENST00000582453	PCDH19	Q8TAB3	1148 aa		4.57	□□□□□ -1.68
MSI2-215	ENST00000582453	SH3TC2	Q8TF17	1288 aa		4.57	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms