RNA–Protein interactions for RNA: ENST00000582376.1

GGA3-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-212ENST00000582376 TFAP4Q01664 338 aa10.88□□□□□ -0.67
GGA3-212ENST00000582376 LAMC2Q13753 1193 aa10.88□□□□□ -0.67
GGA3-212ENST00000582376 COL9A2Q14055 689 aaPredicted RBP10.88□□□□□ -0.67
GGA3-212ENST00000582376 ZSCAN25Q6NSZ9 544 aa10.88□□□□□ -0.67
GGA3-212ENST00000582376 CCDC105Q8IYK2 499 aa10.88□□□□□ -0.67
GGA3-212ENST00000582376 CLASRPQ8N2M8 674 aaKnown RBP10.88□□□□□ -0.67
GGA3-212ENST00000582376 TMEM57Q8N5G2 664 aa10.88□□□□□ -0.67
GGA3-212ENST00000582376 KLHL23Q8NBE8 558 aa10.88□□□□□ -0.67
GGA3-212ENST00000582376 FLCNQ8NFG4 579 aa10.88□□□□□ -0.67
GGA3-212ENST00000582376 RHPN1Q8TCX5 695 aa10.88□□□□□ -0.67
GGA3-212ENST00000582376 STRBPQ96SI9 672 aaKnown RBP10.88□□□□□ -0.67
GGA3-212ENST00000582376 CDCA3Q99618 268 aaPredicted RBP10.88□□□□□ -0.67
GGA3-212ENST00000582376 S1PR5Q9H228 398 aa10.88□□□□□ -0.67
GGA3-212ENST00000582376 BOLA2Q9H3K6 86 aa10.88□□□□□ -0.67
GGA3-212ENST00000582376 TSHZ2Q9NRE2 1034 aa10.88□□□□□ -0.67
GGA3-212ENST00000582376 PNMA2Q9UL42 364 aa10.88□□□□□ -0.67
GGA3-212ENST00000582376 MTMR7Q9Y216 660 aa10.88□□□□□ -0.67
GGA3-212ENST00000582376 IFIT2P09913 472 aaKnown RBP10.87□□□□□ -0.67
GGA3-212ENST00000582376 SLC16A2P36021 539 aa10.87□□□□□ -0.67
GGA3-212ENST00000582376 TDO2P48775 406 aa10.87□□□□□ -0.67
GGA3-212ENST00000582376 RBM10P98175 930 aaKnown RBP10.87□□□□□ -0.67
GGA3-212ENST00000582376 RSPO4Q2I0M5 234 aaPredicted RBP10.87□□□□□ -0.67
GGA3-212ENST00000582376 HSP90AB4PQ58FF6 505 aa10.87□□□□□ -0.67
GGA3-212ENST00000582376 SYDE2Q5VT97 1194 aa10.87□□□□□ -0.67
GGA3-212ENST00000582376 CWF19L1Q69YN2 538 aaKnown RBP10.87□□□□□ -0.67
GGA3-212ENST00000582376 TTBK2Q6IQ55 1244 aa10.87□□□□□ -0.67
GGA3-212ENST00000582376 RASGRP2Q7LDG7 609 aa10.87□□□□□ -0.67
GGA3-212ENST00000582376 VN1R2Q8NFZ6 395 aa10.87□□□□□ -0.67
GGA3-212ENST00000582376 CYP2W1Q8TAV3 490 aa10.87□□□□□ -0.67
GGA3-212ENST00000582376 MICAL1Q8TDZ2 1067 aa10.87□□□□□ -0.67
GGA3-212ENST00000582376 FRAT1Q92837 279 aaPredicted RBP10.87□□□□□ -0.67
GGA3-212ENST00000582376 SMOC2Q9H3U7 446 aa10.87□□□□□ -0.67
GGA3-212ENST00000582376 DDX41Q9UJV9 622 aaKnown RBP10.87□□□□□ -0.67
GGA3-212ENST00000582376 STX8Q9UNK0 236 aa10.87□□□□□ -0.67
GGA3-212ENST00000582376 MRPL42Q9Y6G3 142 aaKnown RBP10.87□□□□□ -0.67
GGA3-212ENST00000582376 TREHO43280 583 aa10.86□□□□□ -0.67
GGA3-212ENST00000582376 ANP32CO43423 234 aa10.86□□□□□ -0.67
GGA3-212ENST00000582376 PPFIA4O75335 1185 aa10.86□□□□□ -0.67
GGA3-212ENST00000582376 DGKIO75912 1065 aa10.86□□□□□ -0.67
GGA3-212ENST00000582376 HOXD8P13378 290 aaPredicted RBP10.86□□□□□ -0.67
GGA3-212ENST00000582376 AOC1P19801 751 aa10.86□□□□□ -0.67
GGA3-212ENST00000582376 TECP42680 631 aa10.86□□□□□ -0.67
GGA3-212ENST00000582376 STXBP2Q15833 593 aa10.86□□□□□ -0.67
GGA3-212ENST00000582376 DUSP6Q16828 381 aa10.86□□□□□ -0.67
GGA3-212ENST00000582376 ANKRD54Q6NXT1 300 aa10.86□□□□□ -0.67
GGA3-212ENST00000582376 BTNL9Q6UXG8 535 aa10.86□□□□□ -0.67
GGA3-212ENST00000582376 CMTR2Q8IYT2 770 aaKnown RBP10.86□□□□□ -0.67
GGA3-212ENST00000582376 DTWD2Q8NBA8 298 aa10.86□□□□□ -0.67
GGA3-212ENST00000582376 DCAF4Q8WV16 495 aa10.86□□□□□ -0.67
GGA3-212ENST00000582376 RTP3Q9BQQ7 232 aa10.86□□□□□ -0.67
GGA3-212ENST00000582376 APOL5Q9BWW9 433 aa10.86□□□□□ -0.67
GGA3-212ENST00000582376 MRVI1Q9Y6F6 885 aa10.86□□□□□ -0.67
GGA3-212ENST00000582376 DMDP11532 3685 aa10.86□□□□□ -0.67
GGA3-212ENST00000582376 CEP250Q9BV73 2442 aa10.85□□□□□ -0.67
GGA3-212ENST00000582376 C2CD4DB7Z1M9 353 aa10.85□□□□□ -0.67
GGA3-212ENST00000582376 ENPP3O14638 875 aa10.85□□□□□ -0.67
GGA3-212ENST00000582376 PI15O43692 258 aa10.85□□□□□ -0.67
GGA3-212ENST00000582376 SDHBP21912 280 aa10.85□□□□□ -0.67
GGA3-212ENST00000582376 HOXC8P31273 242 aa10.85□□□□□ -0.67
GGA3-212ENST00000582376 FAM26DQ5JW98 314 aa10.85□□□□□ -0.67
GGA3-212ENST00000582376 KIAA0319Q5VV43 1072 aa10.85□□□□□ -0.67
GGA3-212ENST00000582376 RUBCNQ92622 972 aa10.85□□□□□ -0.67
GGA3-212ENST00000582376 BCL11AQ9H165 835 aa10.85□□□□□ -0.67
GGA3-212ENST00000582376 EPB41L4AQ9HCS5 686 aaPredicted RBP10.85□□□□□ -0.67
GGA3-212ENST00000582376 R4GN57 208 aa10.85□□□□□ -0.67
GGA3-212ENST00000582376 ZNF292O60281 2723 aa10.85□□□□□ -0.67
GGA3-212ENST00000582376 MYO10Q9HD67 2058 aa10.85□□□□□ -0.67
GGA3-212ENST00000582376 MYH7P12883 1935 aa10.84□□□□□ -0.67
GGA3-212ENST00000582376 PPFIA3O75145 1194 aa10.84□□□□□ -0.67
GGA3-212ENST00000582376 APPP05067 770 aa10.84□□□□□ -0.67
GGA3-212ENST00000582376 ASGR2P07307 311 aa10.84□□□□□ -0.67
GGA3-212ENST00000582376 SLC3A2P08195 630 aaKnown RBP10.84□□□□□ -0.67
GGA3-212ENST00000582376 SMIM10L2AP0DMW4 78 aa10.84□□□□□ -0.67
GGA3-212ENST00000582376 SMIM10L2BP0DMW5 78 aa10.84□□□□□ -0.67
GGA3-212ENST00000582376 GHRP10912 638 aa10.84□□□□□ -0.67
GGA3-212ENST00000582376 ATP5JP18859 108 aa10.84□□□□□ -0.67
GGA3-212ENST00000582376 CEP85Q6P2H3 762 aa10.84□□□□□ -0.67
GGA3-212ENST00000582376 SYCE2Q6PIF2 218 aa10.84□□□□□ -0.67
GGA3-212ENST00000582376 TMEM184AQ6ZMB5 413 aa10.84□□□□□ -0.67
GGA3-212ENST00000582376 RGS22Q8NE09 1264 aa10.84□□□□□ -0.67
GGA3-212ENST00000582376 NSUN6Q8TEA1 469 aaKnown RBP10.84□□□□□ -0.67
GGA3-212ENST00000582376 CHAMP1Q96JM3 812 aa10.84□□□□□ -0.67
GGA3-212ENST00000582376 TAAR1Q96RJ0 339 aa10.84□□□□□ -0.67
GGA3-212ENST00000582376 IWS1Q96ST2 819 aa10.84□□□□□ -0.67
GGA3-212ENST00000582376 C16orf70Q9BSU1 422 aa10.84□□□□□ -0.67
GGA3-212ENST00000582376 RNPEPQ9H4A4 650 aa10.84□□□□□ -0.67
GGA3-212ENST00000582376 CHD8Q9HCK8 2581 aa10.84□□□□□ -0.67
GGA3-212ENST00000582376 WDR19Q8NEZ3 1342 aa10.84□□□□□ -0.67
GGA3-212ENST00000582376 MAP1BP46821 2468 aaKnown RBP10.83□□□□□ -0.68
GGA3-212ENST00000582376 ZFHX4Q86UP3 3567 aa10.83□□□□□ -0.68
GGA3-212ENST00000582376 TSPY2A6NKD2 308 aa10.83□□□□□ -0.68
GGA3-212ENST00000582376 GNAT1P11488 350 aa10.83□□□□□ -0.68
GGA3-212ENST00000582376 NPR3P17342 541 aa10.83□□□□□ -0.68
GGA3-212ENST00000582376 HOXB8P17481 243 aaPredicted RBP10.83□□□□□ -0.68
GGA3-212ENST00000582376 GNAT2P19087 354 aa10.83□□□□□ -0.68
GGA3-212ENST00000582376 UBE3AQ05086 875 aa10.83□□□□□ -0.68
GGA3-212ENST00000582376 KCNC3Q14003 757 aa10.83□□□□□ -0.68
GGA3-212ENST00000582376 PAN2Q504Q3 1202 aaKnown RBP10.83□□□□□ -0.68
GGA3-212ENST00000582376 ZC3H14Q6PJT7 736 aaKnown RBP10.83□□□□□ -0.68
GGA3-212ENST00000582376 DCLK2Q8N568 766 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms