RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 RBM19Q9Y4C8 960 aaKnown RBP10.08□□□□□ -0.8
PDLIM1P3-201ENST00000582370 PTPRZ1P23471 2315 aaPredicted RBP10.07□□□□□ -0.8
PDLIM1P3-201ENST00000582370 TMEM221A6NGB7 291 aa10.07□□□□□ -0.8
PDLIM1P3-201ENST00000582370 M0R296 226 aa10.07□□□□□ -0.8
PDLIM1P3-201ENST00000582370 CPLX1O14810 134 aa10.07□□□□□ -0.8
PDLIM1P3-201ENST00000582370 NCK2O43639 380 aa10.07□□□□□ -0.8
PDLIM1P3-201ENST00000582370 KPNA6O60684 536 aa10.07□□□□□ -0.8
PDLIM1P3-201ENST00000582370 CXCL10P02778 98 aa10.07□□□□□ -0.8
PDLIM1P3-201ENST00000582370 ANTXR2P58335 489 aa10.07□□□□□ -0.8
PDLIM1P3-201ENST00000582370 HMGN5P82970 282 aaKnown RBP10.07□□□□□ -0.8
PDLIM1P3-201ENST00000582370 APOA5Q6Q788 366 aa10.07□□□□□ -0.8
PDLIM1P3-201ENST00000582370 TRIM67Q6ZTA4 783 aa10.07□□□□□ -0.8
PDLIM1P3-201ENST00000582370 EEPD1Q7L9B9 569 aa10.07□□□□□ -0.8
PDLIM1P3-201ENST00000582370 RNF135Q8IUD6 432 aa10.07□□□□□ -0.8
PDLIM1P3-201ENST00000582370 ZNF654Q8IZM8 581 aa10.07□□□□□ -0.8
PDLIM1P3-201ENST00000582370 FBXL6Q8N531 539 aa10.07□□□□□ -0.8
PDLIM1P3-201ENST00000582370 PNMA1Q8ND90 353 aa10.07□□□□□ -0.8
PDLIM1P3-201ENST00000582370 MORC4Q8TE76 937 aa10.07□□□□□ -0.8
PDLIM1P3-201ENST00000582370 WASF1Q92558 559 aa10.07□□□□□ -0.8
PDLIM1P3-201ENST00000582370 PBXIP1Q96AQ6 731 aa10.07□□□□□ -0.8
PDLIM1P3-201ENST00000582370 GMCL1Q96IK5 515 aa10.07□□□□□ -0.8
PDLIM1P3-201ENST00000582370 C17orf80Q9BSJ5 609 aa10.07□□□□□ -0.8
PDLIM1P3-201ENST00000582370 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.07□□□□□ -0.8
PDLIM1P3-201ENST00000582370 NSUN3Q9H649 340 aaKnown RBP10.07□□□□□ -0.8
PDLIM1P3-201ENST00000582370 IL17RBQ9NRM6 502 aa10.07□□□□□ -0.8
PDLIM1P3-201ENST00000582370 RNF146Q9NTX7 359 aa10.07□□□□□ -0.8
PDLIM1P3-201ENST00000582370 INSL6Q9Y581 213 aa10.07□□□□□ -0.8
PDLIM1P3-201ENST00000582370 MYO7AQ13402 2215 aa10.06□□□□□ -0.8
PDLIM1P3-201ENST00000582370 MYH6P13533 1939 aa10.06□□□□□ -0.8
PDLIM1P3-201ENST00000582370 KIAA1217Q5T5P2 1943 aa10.06□□□□□ -0.8
PDLIM1P3-201ENST00000582370 RIF1Q5UIP0 2472 aaKnown RBP10.06□□□□□ -0.8
PDLIM1P3-201ENST00000582370 LOC102724159A0A0B4J2E5 919 aa10.06□□□□□ -0.8
PDLIM1P3-201ENST00000582370 KLF18A0A0U1RQI7 1052 aa10.06□□□□□ -0.8
PDLIM1P3-201ENST00000582370 PROB1E7EW31 1015 aa10.06□□□□□ -0.8
PDLIM1P3-201ENST00000582370 PLA2G6O60733 806 aa10.06□□□□□ -0.8
PDLIM1P3-201ENST00000582370 PFKFB2O60825 505 aa10.06□□□□□ -0.8
PDLIM1P3-201ENST00000582370 SELPP16109 830 aa10.06□□□□□ -0.8
PDLIM1P3-201ENST00000582370 PDCP20941 246 aa10.06□□□□□ -0.8
PDLIM1P3-201ENST00000582370 METAP2P50579 478 aaKnown RBP eCLIP10.06□□□□□ -0.8
PDLIM1P3-201ENST00000582370 RBL2Q08999 1139 aa10.06□□□□□ -0.8
PDLIM1P3-201ENST00000582370 TOB2Q14106 344 aaPredicted RBP10.06□□□□□ -0.8
PDLIM1P3-201ENST00000582370 PWP2Q15269 919 aaKnown RBP10.06□□□□□ -0.8
PDLIM1P3-201ENST00000582370 TCEAL5Q5H9L2 206 aa10.06□□□□□ -0.8
PDLIM1P3-201ENST00000582370 TMEM63BQ5T3F8 832 aa10.06□□□□□ -0.8
PDLIM1P3-201ENST00000582370 EP400NLQ6ZTU2 488 aa10.06□□□□□ -0.8
PDLIM1P3-201ENST00000582370 LRRC8DQ7L1W4 858 aa10.06□□□□□ -0.8
PDLIM1P3-201ENST00000582370 TRIM22Q8IYM9 498 aa10.06□□□□□ -0.8
PDLIM1P3-201ENST00000582370 STK11IPQ8N1F8 1099 aa10.06□□□□□ -0.8
PDLIM1P3-201ENST00000582370 FANCBQ8NB91 859 aa10.06□□□□□ -0.8
PDLIM1P3-201ENST00000582370 OR6J1Q8NGC5 347 aa10.06□□□□□ -0.8
PDLIM1P3-201ENST00000582370 SP7Q8TDD2 431 aaPredicted RBP10.06□□□□□ -0.8
PDLIM1P3-201ENST00000582370 TMEM47Q9BQJ4 181 aa10.06□□□□□ -0.8
PDLIM1P3-201ENST00000582370 FAM86C1Q9NVL1 165 aa10.06□□□□□ -0.8
PDLIM1P3-201ENST00000582370 CLDND1Q9NY35 253 aa10.06□□□□□ -0.8
PDLIM1P3-201ENST00000582370 CLIP2Q9UDT6 1046 aa10.06□□□□□ -0.8
PDLIM1P3-201ENST00000582370 TAF6LQ9Y6J9 622 aa10.06□□□□□ -0.8
PDLIM1P3-201ENST00000582370 DNAH14Q0VDD8 3507 aa10.06□□□□□ -0.8
PDLIM1P3-201ENST00000582370 CACNA1BQ00975 2339 aa10.06□□□□□ -0.8
PDLIM1P3-201ENST00000582370 GOLGA8BA8MQT2 603 aa10.05□□□□□ -0.8
PDLIM1P3-201ENST00000582370 H3BNC9 293 aa10.05□□□□□ -0.8
PDLIM1P3-201ENST00000582370 hCG_1984214I3L0E3 225 aa10.05□□□□□ -0.8
PDLIM1P3-201ENST00000582370 NKRFO15226 690 aaKnown RBP eCLIP10.05□□□□□ -0.8
PDLIM1P3-201ENST00000582370 MBTPS2O43462 519 aa10.05□□□□□ -0.8
PDLIM1P3-201ENST00000582370 PARP1P09874 1014 aaKnown RBP10.05□□□□□ -0.8
PDLIM1P3-201ENST00000582370 SNHG28P0DPA3 235 aa10.05□□□□□ -0.8
PDLIM1P3-201ENST00000582370 XBP1P17861 261 aa10.05□□□□□ -0.8
PDLIM1P3-201ENST00000582370 PDIA3P30101 505 aaKnown RBP10.05□□□□□ -0.8
PDLIM1P3-201ENST00000582370 TROAPQ12815 778 aa10.05□□□□□ -0.8
PDLIM1P3-201ENST00000582370 IKBKEQ14164 716 aa10.05□□□□□ -0.8
PDLIM1P3-201ENST00000582370 GPNMBQ14956 572 aa10.05□□□□□ -0.8
PDLIM1P3-201ENST00000582370 PTGISQ16647 500 aa10.05□□□□□ -0.8
PDLIM1P3-201ENST00000582370 RTN1Q16799 776 aa10.05□□□□□ -0.8
PDLIM1P3-201ENST00000582370 EPC2Q52LR7 807 aa10.05□□□□□ -0.8
PDLIM1P3-201ENST00000582370 RPAINQ86UA6 219 aa10.05□□□□□ -0.8
PDLIM1P3-201ENST00000582370 ZNF713Q8N859 430 aaPredicted RBP10.05□□□□□ -0.8
PDLIM1P3-201ENST00000582370 CHURC1Q8WUH1 139 aa10.05□□□□□ -0.8
PDLIM1P3-201ENST00000582370 ATOH1Q92858 354 aaPredicted RBP10.05□□□□□ -0.8
PDLIM1P3-201ENST00000582370 GTF3C6Q969F1 213 aa10.05□□□□□ -0.8
PDLIM1P3-201ENST00000582370 TMX3Q96JJ7 454 aa10.05□□□□□ -0.8
PDLIM1P3-201ENST00000582370 WDR11Q9BZH6 1224 aa10.05□□□□□ -0.8
PDLIM1P3-201ENST00000582370 MAF1Q9H063 256 aa10.05□□□□□ -0.8
PDLIM1P3-201ENST00000582370 ALG13Q9NP73 1137 aaKnown RBP10.05□□□□□ -0.8
PDLIM1P3-201ENST00000582370 CYP39A1Q9NYL5 469 aa10.05□□□□□ -0.8
PDLIM1P3-201ENST00000582370 VPS13AQ96RL7 3174 aa10.04□□□□□ -0.8
PDLIM1P3-201ENST00000582370 RBM47A0AV96 593 aaKnown RBP10.04□□□□□ -0.8
PDLIM1P3-201ENST00000582370 A6NJR5 290 aa10.04□□□□□ -0.8
PDLIM1P3-201ENST00000582370 STXBP3O00186 592 aa10.04□□□□□ -0.8
PDLIM1P3-201ENST00000582370 LTBRP36941 435 aa10.04□□□□□ -0.8
PDLIM1P3-201ENST00000582370 SLC1A4P43007 532 aa10.04□□□□□ -0.8
PDLIM1P3-201ENST00000582370 STAT2P52630 851 aa10.04□□□□□ -0.8
PDLIM1P3-201ENST00000582370 NUBP1P53384 320 aa10.04□□□□□ -0.8
PDLIM1P3-201ENST00000582370 HTRA4P83105 476 aaPredicted RBP10.04□□□□□ -0.8
PDLIM1P3-201ENST00000582370 AKAP17AQ02040 695 aaKnown RBP10.04□□□□□ -0.8
PDLIM1P3-201ENST00000582370 SMAD4Q13485 552 aaKnown RBP10.04□□□□□ -0.8
PDLIM1P3-201ENST00000582370 GPM6BQ13491 265 aa10.04□□□□□ -0.8
PDLIM1P3-201ENST00000582370 CUL4AQ13619 759 aa10.04□□□□□ -0.8
PDLIM1P3-201ENST00000582370 GRM4Q14833 912 aa10.04□□□□□ -0.8
PDLIM1P3-201ENST00000582370 CTC1Q2NKJ3 1217 aa10.04□□□□□ -0.8
PDLIM1P3-201ENST00000582370 FAM117BQ6P1L5 589 aa10.04□□□□□ -0.8
PDLIM1P3-201ENST00000582370 CHST3Q7LGC8 479 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms