RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 MED24O75448 989 aa16.35■□□□□ 0.21
MKS1-211ENST00000581761 CAPN15O75808 1086 aa16.35■□□□□ 0.21
MKS1-211ENST00000581761 SSBP05455 408 aaKnown RBP eCLIP16.35■□□□□ 0.21
MKS1-211ENST00000581761 PRCPP42785 496 aa16.35■□□□□ 0.21
MKS1-211ENST00000581761 SETQ01105 290 aaPredicted RBP16.35■□□□□ 0.21
MKS1-211ENST00000581761 UNC13DQ70J99 1090 aa16.35■□□□□ 0.21
MKS1-211ENST00000581761 FILIP1Q7Z7B0 1213 aa16.35■□□□□ 0.21
MKS1-211ENST00000581761 GIMAP8Q8ND71 665 aaPredicted RBP16.35■□□□□ 0.21
MKS1-211ENST00000581761 SLC5A5Q92911 643 aa16.35■□□□□ 0.21
MKS1-211ENST00000581761 MAP3K20Q9NYL2 800 aaKnown RBP16.35■□□□□ 0.21
MKS1-211ENST00000581761 PARP14Q460N5 1801 aa16.35■□□□□ 0.21
MKS1-211ENST00000581761 RBBP6Q7Z6E9 1792 aaKnown RBP16.34■□□□□ 0.21
MKS1-211ENST00000581761 PVALEFA0A1B0GWK0 134 aa16.34■□□□□ 0.21
MKS1-211ENST00000581761 SPDYE5A6NIY4 337 aa16.34■□□□□ 0.21
MKS1-211ENST00000581761 E9PMD0 336 aa16.34■□□□□ 0.21
MKS1-211ENST00000581761 COBLO75128 1261 aa16.34■□□□□ 0.21
MKS1-211ENST00000581761 PLA2G4BP0C869 781 aa16.34■□□□□ 0.21
MKS1-211ENST00000581761 CLCN1P35523 988 aa16.34■□□□□ 0.21
MKS1-211ENST00000581761 OAZ1P54368 228 aa16.34■□□□□ 0.21
MKS1-211ENST00000581761 LRCH2Q5VUJ6 765 aa16.34■□□□□ 0.21
MKS1-211ENST00000581761 SNRNP48Q6IEG0 339 aaKnown RBP16.34■□□□□ 0.21
MKS1-211ENST00000581761 CNNM4Q6P4Q7 775 aa16.34■□□□□ 0.21
MKS1-211ENST00000581761 NSMFQ6X4W1 530 aa16.34■□□□□ 0.21
MKS1-211ENST00000581761 DYMQ7RTS9 669 aa16.34■□□□□ 0.21
MKS1-211ENST00000581761 ZFP91Q96JP5 570 aaPredicted RBP16.34■□□□□ 0.21
MKS1-211ENST00000581761 MXRA8Q9BRK3 442 aa16.34■□□□□ 0.21
MKS1-211ENST00000581761 MAPK8IP1Q9UQF2 711 aa16.34■□□□□ 0.21
MKS1-211ENST00000581761 MEIS1O00470 390 aa16.33■□□□□ 0.2
MKS1-211ENST00000581761 PSMA7O14818 248 aa16.33■□□□□ 0.2
MKS1-211ENST00000581761 ZBTB48P10074 688 aaPredicted RBP16.33■□□□□ 0.2
MKS1-211ENST00000581761 PPP1R2P41236 205 aa16.33■□□□□ 0.2
MKS1-211ENST00000581761 SLC30A10Q6XR72 485 aa16.33■□□□□ 0.2
MKS1-211ENST00000581761 RNF207Q6ZRF8 634 aa16.33■□□□□ 0.2
MKS1-211ENST00000581761 ERO1BQ86YB8 467 aa16.33■□□□□ 0.2
MKS1-211ENST00000581761 OTUD5Q96G74 571 aa16.33■□□□□ 0.2
MKS1-211ENST00000581761 MS4A4AQ96JQ5 239 aa16.33■□□□□ 0.2
MKS1-211ENST00000581761 TAAR1Q96RJ0 339 aa16.33■□□□□ 0.2
MKS1-211ENST00000581761 ZNF577Q9BSK1 485 aa16.33■□□□□ 0.2
MKS1-211ENST00000581761 BMP2KQ9NSY1 1161 aaPredicted RBP16.33■□□□□ 0.2
MKS1-211ENST00000581761 IMPACTQ9P2X3 320 aa16.33■□□□□ 0.2
MKS1-211ENST00000581761 ADAMTS5Q9UNA0 930 aa16.33■□□□□ 0.2
MKS1-211ENST00000581761 MYPNQ86TC9 1320 aa16.33■□□□□ 0.2
MKS1-211ENST00000581761 POTEFA5A3E0 1075 aa16.32■□□□□ 0.2
MKS1-211ENST00000581761 IRF6O14896 467 aa16.32■□□□□ 0.2
MKS1-211ENST00000581761 ZNF500O60304 480 aaPredicted RBP16.32■□□□□ 0.2
MKS1-211ENST00000581761 GAS7O60861 476 aa16.32■□□□□ 0.2
MKS1-211ENST00000581761 PSMD10O75832 226 aa16.32■□□□□ 0.2
MKS1-211ENST00000581761 ARP10275 920 aa16.32■□□□□ 0.2
MKS1-211ENST00000581761 IDEP14735 1019 aa16.32■□□□□ 0.2
MKS1-211ENST00000581761 RPA1P27694 616 aa16.32■□□□□ 0.2
MKS1-211ENST00000581761 HOXA7P31268 230 aaPredicted RBP16.32■□□□□ 0.2
MKS1-211ENST00000581761 TM4SF4P48230 202 aa16.32■□□□□ 0.2
MKS1-211ENST00000581761 GSDMDP57764 484 aa16.32■□□□□ 0.2
MKS1-211ENST00000581761 RPS6P62753 249 aaKnown RBP16.32■□□□□ 0.2
MKS1-211ENST00000581761 FRMPD4Q14CM0 1322 aa16.32■□□□□ 0.2
MKS1-211ENST00000581761 TKFCQ3LXA3 575 aa16.32■□□□□ 0.2
MKS1-211ENST00000581761 CDKAL1Q5VV42 579 aa16.32■□□□□ 0.2
MKS1-211ENST00000581761 POTEGQ6S5H5 508 aa16.32■□□□□ 0.2
MKS1-211ENST00000581761 POTEEQ6S8J3 1075 aa16.32■□□□□ 0.2
MKS1-211ENST00000581761 GPBP1Q86WP2 473 aa16.32■□□□□ 0.2
MKS1-211ENST00000581761 CATSPER3Q86XQ3 398 aa16.32■□□□□ 0.2
MKS1-211ENST00000581761 IL31RAQ8NI17 732 aa16.32■□□□□ 0.2
MKS1-211ENST00000581761 DDX12PQ92771 950 aa16.32■□□□□ 0.2
MKS1-211ENST00000581761 DHTKD1Q96HY7 919 aaPredicted RBP16.32■□□□□ 0.2
MKS1-211ENST00000581761 NAP1L5Q96NT1 182 aaPredicted RBP16.32■□□□□ 0.2
MKS1-211ENST00000581761 EIF2AK1Q9BQI3 630 aaKnown RBP16.32■□□□□ 0.2
MKS1-211ENST00000581761 POLR3CQ9BUI4 534 aaPredicted RBP16.32■□□□□ 0.2
MKS1-211ENST00000581761 TEKT3Q9BXF9 490 aa16.32■□□□□ 0.2
MKS1-211ENST00000581761 HOXC10Q9NYD6 342 aa16.32■□□□□ 0.2
MKS1-211ENST00000581761 RLFQ13129 1914 aa16.31■□□□□ 0.2
MKS1-211ENST00000581761 SPDYE16A6NNV3 312 aaPredicted RBP16.31■□□□□ 0.2
MKS1-211ENST00000581761 EML1O00423 815 aa16.31■□□□□ 0.2
MKS1-211ENST00000581761 CHMP2AO43633 222 aa16.31■□□□□ 0.2
MKS1-211ENST00000581761 TRPA1O75762 1119 aa16.31■□□□□ 0.2
MKS1-211ENST00000581761 SPATA31C1P0DKV0 1188 aa16.31■□□□□ 0.2
MKS1-211ENST00000581761 FCER1AP12319 257 aa16.31■□□□□ 0.2
MKS1-211ENST00000581761 EIF2AK2P19525 551 aaKnown RBP16.31■□□□□ 0.2
MKS1-211ENST00000581761 SPAG1Q07617 926 aa16.31■□□□□ 0.2
MKS1-211ENST00000581761 STK4Q13043 487 aa16.31■□□□□ 0.2
MKS1-211ENST00000581761 PPP2R5CQ13362 524 aa16.31■□□□□ 0.2
MKS1-211ENST00000581761 BAATQ14032 418 aaPredicted RBP16.31■□□□□ 0.2
MKS1-211ENST00000581761 TMEM132BQ14DG7 1078 aa16.31■□□□□ 0.2
MKS1-211ENST00000581761 PCNX4Q63HM2 1172 aa16.31■□□□□ 0.2
MKS1-211ENST00000581761 GADL1Q6ZQY3 521 aa16.31■□□□□ 0.2
MKS1-211ENST00000581761 OTOP1Q7RTM1 612 aa16.31■□□□□ 0.2
MKS1-211ENST00000581761 NIPA1Q7RTP0 329 aa16.31■□□□□ 0.2
MKS1-211ENST00000581761 VSTM4Q8IW00 320 aa16.31■□□□□ 0.2
MKS1-211ENST00000581761 CACTINQ8WUQ7 758 aaKnown RBP16.31■□□□□ 0.2
MKS1-211ENST00000581761 PTPN18Q99952 460 aa16.31■□□□□ 0.2
MKS1-211ENST00000581761 WDR11Q9BZH6 1224 aa16.31■□□□□ 0.2
MKS1-211ENST00000581761 PYCARDQ9ULZ3 195 aa16.31■□□□□ 0.2
MKS1-211ENST00000581761 DNM3Q9UQ16 869 aa16.31■□□□□ 0.2
MKS1-211ENST00000581761 RIPK3Q9Y572 518 aa16.31■□□□□ 0.2
MKS1-211ENST00000581761 UBIAD1Q9Y5Z9 338 aa16.31■□□□□ 0.2
MKS1-211ENST00000581761 BICDL2A1A5D9 508 aa16.3■□□□□ 0.2
MKS1-211ENST00000581761 TRIM49BA6NDI0 452 aa16.3■□□□□ 0.2
MKS1-211ENST00000581761 ATP2A1O14983 1001 aa16.3■□□□□ 0.2
MKS1-211ENST00000581761 KRT18P05783 430 aaKnown RBP16.3■□□□□ 0.2
MKS1-211ENST00000581761 MYCLP12524 364 aaPredicted RBP16.3■□□□□ 0.2
MKS1-211ENST00000581761 CCNE1P24864 410 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms