RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 KLF10Q13118 480 aa6.02□□□□□ -1.45
SMCHD1-206ENST00000581631 LSAMPQ13449 338 aa6.02□□□□□ -1.45
SMCHD1-206ENST00000581631 PPIL6Q8IXY8 311 aa6.02□□□□□ -1.45
SMCHD1-206ENST00000581631 NUDT10Q8NFP7 164 aa6.02□□□□□ -1.45
SMCHD1-206ENST00000581631 TTLL11Q8NHH1 800 aa6.02□□□□□ -1.45
SMCHD1-206ENST00000581631 NUDT11Q96G61 164 aa6.02□□□□□ -1.45
SMCHD1-206ENST00000581631 SEMA4AQ9H3S1 761 aa6.02□□□□□ -1.45
SMCHD1-206ENST00000581631 ASH2LQ9UBL3 628 aa6.02□□□□□ -1.45
SMCHD1-206ENST00000581631 FTSJ1Q9UET6 329 aa6.02□□□□□ -1.45
SMCHD1-206ENST00000581631 B4GALT4O60513 344 aa6.01□□□□□ -1.45
SMCHD1-206ENST00000581631 CPP00450 1065 aa6.01□□□□□ -1.45
SMCHD1-206ENST00000581631 ECI1P42126 302 aa6.01□□□□□ -1.45
SMCHD1-206ENST00000581631 SLC35F1Q5T1Q4 408 aa6.01□□□□□ -1.45
SMCHD1-206ENST00000581631 CYP4F22Q6NT55 531 aa6.01□□□□□ -1.45
SMCHD1-206ENST00000581631 TMC5Q6UXY8 1006 aa6.01□□□□□ -1.45
SMCHD1-206ENST00000581631 NT5DC4Q86YG4 428 aa6.01□□□□□ -1.45
SMCHD1-206ENST00000581631 DTX3Q8N9I9 347 aa6.01□□□□□ -1.45
SMCHD1-206ENST00000581631 PHOSPHO1Q8TCT1 267 aa6.01□□□□□ -1.45
SMCHD1-206ENST00000581631 DEF6Q9H4E7 631 aa6.01□□□□□ -1.45
SMCHD1-206ENST00000581631 SMOC1Q9H4F8 434 aa6.01□□□□□ -1.45
SMCHD1-206ENST00000581631 EPB41L1Q9H4G0 881 aa6.01□□□□□ -1.45
SMCHD1-206ENST00000581631 MYOTQ9UBF9 498 aa6.01□□□□□ -1.45
SMCHD1-206ENST00000581631 TCAF1Q9Y4C2 921 aa6.01□□□□□ -1.45
SMCHD1-206ENST00000581631 PCDHA2Q9Y5H9 948 aa6.01□□□□□ -1.45
SMCHD1-206ENST00000581631 CRB2Q5IJ48 1285 aa6□□□□□ -1.45
SMCHD1-206ENST00000581631 MRM1Q6IN84 353 aaKnown RBP6□□□□□ -1.45
SMCHD1-206ENST00000581631 TRMT10BQ6PF06 316 aaKnown RBP6□□□□□ -1.45
SMCHD1-206ENST00000581631 C6orf15Q6UXA7 325 aaPredicted RBP6□□□□□ -1.45
SMCHD1-206ENST00000581631 TMEM145Q8NBT3 493 aa6□□□□□ -1.45
SMCHD1-206ENST00000581631 CPLX3Q8WVH0 158 aa6□□□□□ -1.45
SMCHD1-206ENST00000581631 PPP1R14AQ96A00 147 aa6□□□□□ -1.45
SMCHD1-206ENST00000581631 PDGFDQ9GZP0 370 aaPredicted RBP6□□□□□ -1.45
SMCHD1-206ENST00000581631 CLDND1Q9NY35 253 aa6□□□□□ -1.45
SMCHD1-206ENST00000581631 ING1Q9UK53 422 aaPredicted RBP6□□□□□ -1.45
SMCHD1-206ENST00000581631 B2RBV5 119 aa5.99□□□□□ -1.45
SMCHD1-206ENST00000581631 SUSD5O60279 629 aa5.99□□□□□ -1.45
SMCHD1-206ENST00000581631 USP51Q70EK9 711 aa5.99□□□□□ -1.45
SMCHD1-206ENST00000581631 AJUBAQ96IF1 538 aa5.99□□□□□ -1.45
SMCHD1-206ENST00000581631 CCDC140Q96MF4 163 aa5.99□□□□□ -1.45
SMCHD1-206ENST00000581631 SEC61A2Q9H9S3 476 aa5.99□□□□□ -1.45
SMCHD1-206ENST00000581631 BARX1Q9HBU1 254 aaPredicted RBP5.99□□□□□ -1.45
SMCHD1-206ENST00000581631 DLL4Q9NR61 685 aa5.99□□□□□ -1.45
SMCHD1-206ENST00000581631 SLC4A7Q9Y6M7 1214 aa5.99□□□□□ -1.45
SMCHD1-206ENST00000581631 FOXS1O43638 330 aa5.98□□□□□ -1.45
SMCHD1-206ENST00000581631 KNG1P01042 644 aa5.98□□□□□ -1.45
SMCHD1-206ENST00000581631 CHGBP05060 677 aa5.98□□□□□ -1.45
SMCHD1-206ENST00000581631 CSF2RBP32927 897 aa5.98□□□□□ -1.45
SMCHD1-206ENST00000581631 Q6ZUG5 572 aa5.98□□□□□ -1.45
SMCHD1-206ENST00000581631 ANAPC16Q96DE5 110 aa5.98□□□□□ -1.45
SMCHD1-206ENST00000581631 HS3ST3A1Q9Y663 406 aa5.98□□□□□ -1.45
SMCHD1-206ENST00000581631 DGKIO75912 1065 aa5.97□□□□□ -1.45
SMCHD1-206ENST00000581631 MIIPQ5JXC2 388 aa5.97□□□□□ -1.45
SMCHD1-206ENST00000581631 TCTN3Q6NUS6 607 aa5.97□□□□□ -1.45
SMCHD1-206ENST00000581631 FAM178BQ8IXR5 827 aa5.97□□□□□ -1.45
SMCHD1-206ENST00000581631 CLEC4DQ8WXI8 215 aa5.97□□□□□ -1.45
SMCHD1-206ENST00000581631 SLC6A20Q9NP91 592 aa5.97□□□□□ -1.45
SMCHD1-206ENST00000581631 JADE2Q9NQC1 790 aa5.97□□□□□ -1.45
SMCHD1-206ENST00000581631 KCND1Q9NSA2 647 aa5.97□□□□□ -1.45
SMCHD1-206ENST00000581631 ZDHHC9Q9Y397 364 aa5.97□□□□□ -1.45
SMCHD1-206ENST00000581631 SMAD7O15105 426 aaKnown RBP5.96□□□□□ -1.46
SMCHD1-206ENST00000581631 MSCO60682 206 aa5.96□□□□□ -1.46
SMCHD1-206ENST00000581631 ATF4P18848 351 aaPredicted RBP5.96□□□□□ -1.46
SMCHD1-206ENST00000581631 SMAD2Q15796 467 aaKnown RBP5.96□□□□□ -1.46
SMCHD1-206ENST00000581631 SV2CQ496J9 727 aa5.96□□□□□ -1.46
SMCHD1-206ENST00000581631 PHF19Q5T6S3 580 aa5.96□□□□□ -1.46
SMCHD1-206ENST00000581631 RALYLQ86SE5 291 aaKnown RBP5.96□□□□□ -1.46
SMCHD1-206ENST00000581631 GNRHR2Q96P88 292 aa5.96□□□□□ -1.46
SMCHD1-206ENST00000581631 TGIF2Q9GZN2 237 aa5.96□□□□□ -1.46
SMCHD1-206ENST00000581631 KATNBL1Q9H079 304 aa5.96□□□□□ -1.46
SMCHD1-206ENST00000581631 ACBD3Q9H3P7 528 aa5.96□□□□□ -1.46
SMCHD1-206ENST00000581631 PPARGC1AQ9UBK2 798 aaKnown RBP5.96□□□□□ -1.46
SMCHD1-206ENST00000581631 IGFL4Q6B9Z1 124 aa5.95□□□□□ -1.46
SMCHD1-206ENST00000581631 PIP4K2CQ8TBX8 421 aa5.95□□□□□ -1.46
SMCHD1-206ENST00000581631 MICAL1Q8TDZ2 1067 aa5.95□□□□□ -1.46
SMCHD1-206ENST00000581631 ZNF503Q96F45 646 aa5.95□□□□□ -1.46
SMCHD1-206ENST00000581631 CHAMP1Q96JM3 812 aa5.95□□□□□ -1.46
SMCHD1-206ENST00000581631 ACTR10Q9NZ32 417 aa5.95□□□□□ -1.46
SMCHD1-206ENST00000581631 SLC27A2O14975 620 aa5.94□□□□□ -1.46
SMCHD1-206ENST00000581631 FAHP16930 419 aa5.94□□□□□ -1.46
SMCHD1-206ENST00000581631 GRIA2P42262 883 aa5.94□□□□□ -1.46
SMCHD1-206ENST00000581631 KCNJ6P48051 423 aa5.94□□□□□ -1.46
SMCHD1-206ENST00000581631 MAP4K2Q12851 820 aa5.94□□□□□ -1.46
SMCHD1-206ENST00000581631 FOXE3Q13461 319 aa5.94□□□□□ -1.46
SMCHD1-206ENST00000581631 HABP4Q5JVS0 413 aaKnown RBP5.94□□□□□ -1.46
SMCHD1-206ENST00000581631 TMCO4Q5TGY1 634 aa5.94□□□□□ -1.46
SMCHD1-206ENST00000581631 VASNQ6EMK4 673 aa5.94□□□□□ -1.46
SMCHD1-206ENST00000581631 RNF207Q6ZRF8 634 aa5.94□□□□□ -1.46
SMCHD1-206ENST00000581631 GPR27Q9NS67 375 aa5.94□□□□□ -1.46
SMCHD1-206ENST00000581631 TELO2Q9Y4R8 837 aa5.94□□□□□ -1.46
SMCHD1-206ENST00000581631 MAFKO60675 156 aa5.93□□□□□ -1.46
SMCHD1-206ENST00000581631 IL18BPO95998 194 aa5.93□□□□□ -1.46
SMCHD1-206ENST00000581631 GRIN1Q05586 938 aa5.93□□□□□ -1.46
SMCHD1-206ENST00000581631 SKIDA1Q1XH10 827 aa5.93□□□□□ -1.46
SMCHD1-206ENST00000581631 OTOP3Q7RTS5 596 aa5.93□□□□□ -1.46
SMCHD1-206ENST00000581631 GPR155Q7Z3F1 870 aa5.93□□□□□ -1.46
SMCHD1-206ENST00000581631 TRIM48Q8IWZ4 208 aa5.93□□□□□ -1.46
SMCHD1-206ENST00000581631 REXO1L1PQ8IX06 675 aa5.93□□□□□ -1.46
SMCHD1-206ENST00000581631 UHMK1Q8TAS1 419 aaKnown RBP5.93□□□□□ -1.46
SMCHD1-206ENST00000581631 JAM3Q9BX67 310 aa5.93□□□□□ -1.46
SMCHD1-206ENST00000581631 ZFP69BQ9UJL9 534 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms