RNA–Protein interactions for RNA: ENST00000581108.5

CSNK1D-216, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-216ENST00000581108 RBL2Q08999 1139 aa24.46■■□□□ 1.51
CSNK1D-216ENST00000581108 RTN1Q16799 776 aa24.46■■□□□ 1.51
CSNK1D-216ENST00000581108 NLRX1Q86UT6 975 aa24.46■■□□□ 1.51
CSNK1D-216ENST00000581108 GPR20Q99678 358 aa24.46■■□□□ 1.51
CSNK1D-216ENST00000581108 PCDHA11Q9Y5I1 949 aa24.46■■□□□ 1.51
CSNK1D-216ENST00000581108 KLF18A0A0U1RQI7 1052 aa24.45■■□□□ 1.5
CSNK1D-216ENST00000581108 HMGB1P09429 215 aaKnown RBP24.45■■□□□ 1.5
CSNK1D-216ENST00000581108 FUT2Q10981 343 aa24.45■■□□□ 1.5
CSNK1D-216ENST00000581108 TRIM71Q2Q1W2 868 aaKnown RBP24.45■■□□□ 1.5
CSNK1D-216ENST00000581108 WWC2Q6AWC2 1192 aa24.45■■□□□ 1.5
CSNK1D-216ENST00000581108 KCNB2Q92953 911 aa24.45■■□□□ 1.5
CSNK1D-216ENST00000581108 SENP7Q9BQF6 1050 aa24.45■■□□□ 1.5
CSNK1D-216ENST00000581108 USP26Q9BXU7 913 aa24.45■■□□□ 1.5
CSNK1D-216ENST00000581108 PCDHA6Q9UN73 950 aa24.45■■□□□ 1.5
CSNK1D-216ENST00000581108 PCDHA8Q9Y5H6 950 aa24.45■■□□□ 1.5
CSNK1D-216ENST00000581108 V9GY48 417 aaPredicted RBP24.45■■□□□ 1.5
CSNK1D-216ENST00000581108 CHD7Q9P2D1 2997 aa24.45■■□□□ 1.5
CSNK1D-216ENST00000581108 SPDYE3A6NKU9 549 aa24.44■■□□□ 1.5
CSNK1D-216ENST00000581108 ITGB5P18084 799 aa24.44■■□□□ 1.5
CSNK1D-216ENST00000581108 SP4Q02446 784 aa24.44■■□□□ 1.5
CSNK1D-216ENST00000581108 TYW1BQ6NUM6 668 aa24.44■■□□□ 1.5
CSNK1D-216ENST00000581108 FAM217BQ9NTX9 383 aaPredicted RBP24.44■■□□□ 1.5
CSNK1D-216ENST00000581108 GOLGA8AA7E2F4 631 aa24.43■■□□□ 1.5
CSNK1D-216ENST00000581108 GOLGA8BA8MQT2 603 aa24.43■■□□□ 1.5
CSNK1D-216ENST00000581108 NBNO60934 754 aa24.43■■□□□ 1.5
CSNK1D-216ENST00000581108 ATP9AO75110 1047 aa24.43■■□□□ 1.5
CSNK1D-216ENST00000581108 SMIM10L2AP0DMW4 78 aa24.43■■□□□ 1.5
CSNK1D-216ENST00000581108 SMIM10L2BP0DMW5 78 aa24.43■■□□□ 1.5
CSNK1D-216ENST00000581108 CDC27P30260 824 aa24.43■■□□□ 1.5
CSNK1D-216ENST00000581108 HSPA4P34932 840 aa24.43■■□□□ 1.5
CSNK1D-216ENST00000581108 ZNF618Q5T7W0 954 aa24.43■■□□□ 1.5
CSNK1D-216ENST00000581108 TRAF7Q6Q0C0 670 aa24.43■■□□□ 1.5
CSNK1D-216ENST00000581108 GPRASP2Q96D09 838 aa24.43■■□□□ 1.5
CSNK1D-216ENST00000581108 GAS2L1Q99501 681 aaPredicted RBP24.43■■□□□ 1.5
CSNK1D-216ENST00000581108 RNPEPQ9H4A4 650 aa24.43■■□□□ 1.5
CSNK1D-216ENST00000581108 NAP1L2Q9ULW6 460 aaPredicted RBP24.43■■□□□ 1.5
CSNK1D-216ENST00000581108 SNX14Q9Y5W7 946 aa24.43■■□□□ 1.5
CSNK1D-216ENST00000581108 CUL9Q8IWT3 2517 aa24.43■■□□□ 1.5
CSNK1D-216ENST00000581108 PTPRSQ13332 1948 aa24.43■■□□□ 1.5
CSNK1D-216ENST00000581108 KAT6AQ92794 2004 aa24.42■■□□□ 1.5
CSNK1D-216ENST00000581108 C17orf102A2RUQ5 167 aa24.42■■□□□ 1.5
CSNK1D-216ENST00000581108 NAPAP54920 295 aa24.42■■□□□ 1.5
CSNK1D-216ENST00000581108 FGD1P98174 961 aa24.42■■□□□ 1.5
CSNK1D-216ENST00000581108 UTP14CQ5TAP6 766 aaKnown RBP24.42■■□□□ 1.5
CSNK1D-216ENST00000581108 SERINC5Q86VE9 423 aa24.42■■□□□ 1.5
CSNK1D-216ENST00000581108 TRIM50Q86XT4 487 aa24.42■■□□□ 1.5
CSNK1D-216ENST00000581108 PHOSPHO2Q8TCD6 241 aa24.42■■□□□ 1.5
CSNK1D-216ENST00000581108 JAKMIP1Q96N16 626 aaKnown RBP24.42■■□□□ 1.5
CSNK1D-216ENST00000581108 SLC9A7Q96T83 725 aa24.42■■□□□ 1.5
CSNK1D-216ENST00000581108 UBIAD1Q9Y5Z9 338 aa24.42■■□□□ 1.5
CSNK1D-216ENST00000581108 BAIAP3O94812 1187 aa24.41■■□□□ 1.5
CSNK1D-216ENST00000581108 PARNO95453 639 aaKnown RBP24.41■■□□□ 1.5
CSNK1D-216ENST00000581108 CXCL10P02778 98 aa24.41■■□□□ 1.5
CSNK1D-216ENST00000581108 KCNA2P16389 499 aa24.41■■□□□ 1.5
CSNK1D-216ENST00000581108 HOXC8P31273 242 aa24.41■■□□□ 1.5
CSNK1D-216ENST00000581108 APOBRQ0VD83 1088 aa24.41■■□□□ 1.5
CSNK1D-216ENST00000581108 TCTN1Q2MV58 587 aa24.41■■□□□ 1.5
CSNK1D-216ENST00000581108 PPP2R2DQ66LE6 453 aa24.41■■□□□ 1.5
CSNK1D-216ENST00000581108 Q6ZUG5 572 aa24.41■■□□□ 1.5
CSNK1D-216ENST00000581108 GIMAP8Q8ND71 665 aaPredicted RBP24.41■■□□□ 1.5
CSNK1D-216ENST00000581108 ATP6V0A1Q93050 837 aa24.41■■□□□ 1.5
CSNK1D-216ENST00000581108 TREHO43280 583 aa24.4■■□□□ 1.5
CSNK1D-216ENST00000581108 ADD1P35611 737 aaKnown RBP24.4■■□□□ 1.5
CSNK1D-216ENST00000581108 ADGRE1Q14246 886 aa24.4■■□□□ 1.5
CSNK1D-216ENST00000581108 MBTPS1Q14703 1052 aa24.4■■□□□ 1.5
CSNK1D-216ENST00000581108 CNKSR3Q6P9H4 555 aa24.4■■□□□ 1.5
CSNK1D-216ENST00000581108 HERC6Q8IVU3 1022 aa24.4■■□□□ 1.5
CSNK1D-216ENST00000581108 USP38Q8NB14 1042 aa24.4■■□□□ 1.5
CSNK1D-216ENST00000581108 CDHR1Q96JP9 859 aa24.4■■□□□ 1.5
CSNK1D-216ENST00000581108 RIC8AQ9NPQ8 531 aa24.4■■□□□ 1.5
CSNK1D-216ENST00000581108 SETD4Q9NVD3 440 aa24.4■■□□□ 1.5
CSNK1D-216ENST00000581108 PKD2L1Q9P0L9 805 aa24.4■■□□□ 1.5
CSNK1D-216ENST00000581108 STXBP3O00186 592 aa24.39■■□□□ 1.49
CSNK1D-216ENST00000581108 CA3P07451 260 aa24.39■■□□□ 1.49
CSNK1D-216ENST00000581108 THPOP40225 353 aa24.39■■□□□ 1.49
CSNK1D-216ENST00000581108 MTMR1Q13613 665 aa24.39■■□□□ 1.49
CSNK1D-216ENST00000581108 BLOC1S2Q6QNY1 142 aa24.39■■□□□ 1.49
CSNK1D-216ENST00000581108 BRF1Q92994 677 aa24.39■■□□□ 1.49
CSNK1D-216ENST00000581108 PGBD1Q96JS3 809 aa24.39■■□□□ 1.49
CSNK1D-216ENST00000581108 JADE2Q9NQC1 790 aa24.39■■□□□ 1.49
CSNK1D-216ENST00000581108 SMCO2A6NFE2 343 aa24.38■■□□□ 1.49
CSNK1D-216ENST00000581108 TCF7P36402 384 aaPredicted RBP24.38■■□□□ 1.49
CSNK1D-216ENST00000581108 KCNJ6P48051 423 aa24.38■■□□□ 1.49
CSNK1D-216ENST00000581108 METAP2P50579 478 aaKnown RBP eCLIP24.38■■□□□ 1.493e-8■■■□□ 18.8
CSNK1D-216ENST00000581108 ADCY7P51828 1080 aa24.38■■□□□ 1.49
CSNK1D-216ENST00000581108 RCAN1P53805 252 aa24.38■■□□□ 1.49
CSNK1D-216ENST00000581108 WDR5P61964 334 aaKnown RBP24.38■■□□□ 1.49
CSNK1D-216ENST00000581108 PPP1R18Q6NYC8 613 aa24.38■■□□□ 1.49
CSNK1D-216ENST00000581108 TMCO2Q7Z6W1 182 aaPredicted RBP24.38■■□□□ 1.49
CSNK1D-216ENST00000581108 PPM1EQ8WY54 764 aa24.38■■□□□ 1.49
CSNK1D-216ENST00000581108 EHMT1Q9H9B1 1298 aa24.38■■□□□ 1.49
CSNK1D-216ENST00000581108 BARHL2Q9NY43 387 aa24.38■■□□□ 1.49
CSNK1D-216ENST00000581108 ZNF215Q9UL58 517 aaPredicted RBP24.38■■□□□ 1.49
CSNK1D-216ENST00000581108 GSTTP1A0A1W2PQM5 241 aa24.37■■□□□ 1.49
CSNK1D-216ENST00000581108 RSPH10B2B2RC85 870 aa24.37■■□□□ 1.49
CSNK1D-216ENST00000581108 REC8O95072 547 aa24.37■■□□□ 1.49
CSNK1D-216ENST00000581108 RSPH10BP0C881 870 aa24.37■■□□□ 1.49
CSNK1D-216ENST00000581108 IGFBP4P22692 258 aa24.37■■□□□ 1.49
CSNK1D-216ENST00000581108 hCG_1984214I3L0E3 225 aa24.36■■□□□ 1.49
CSNK1D-216ENST00000581108 MAFGO15525 162 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms