RNA–Protein interactions for RNA: ENST00000580997.1

SENP3-204, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-204ENST00000580997 RTEL1Q9NZ71 1219 aa14.37□□□□□ -0.11
SENP3-204ENST00000580997 TRANK1O15050 2925 aa14.37□□□□□ -0.11
SENP3-204ENST00000580997 CUL9Q8IWT3 2517 aa14.36□□□□□ -0.11
SENP3-204ENST00000580997 H3BRB1 525 aa14.36□□□□□ -0.11
SENP3-204ENST00000580997 TRAF7Q6Q0C0 670 aa14.36□□□□□ -0.11
SENP3-204ENST00000580997 LRRC8DQ7L1W4 858 aa14.36□□□□□ -0.11
SENP3-204ENST00000580997 DHX32Q7L7V1 743 aaKnown RBP14.36□□□□□ -0.11
SENP3-204ENST00000580997 TEX2Q8IWB9 1127 aa14.36□□□□□ -0.11
SENP3-204ENST00000580997 SLC9A7Q96T83 725 aa14.36□□□□□ -0.11
SENP3-204ENST00000580997 FTOQ9C0B1 505 aaKnown RBP eCLIP14.36□□□□□ -0.11
SENP3-204ENST00000580997 PRDM12Q9H4Q4 367 aa14.36□□□□□ -0.11
SENP3-204ENST00000580997 TUT1Q9H6E5 874 aaKnown RBP14.36□□□□□ -0.11
SENP3-204ENST00000580997 XIRP2A4UGR9 3374 aa14.35□□□□□ -0.11
SENP3-204ENST00000580997 SORBS3O60504 671 aa14.35□□□□□ -0.11
SENP3-204ENST00000580997 CDC45O75419 566 aa14.35□□□□□ -0.11
SENP3-204ENST00000580997 LGALS2P05162 132 aa14.35□□□□□ -0.11
SENP3-204ENST00000580997 MYOGP15173 224 aa14.35□□□□□ -0.11
SENP3-204ENST00000580997 ZNF200P98182 395 aaPredicted RBP14.35□□□□□ -0.11
SENP3-204ENST00000580997 FUT2Q10981 343 aa14.35□□□□□ -0.11
SENP3-204ENST00000580997 ADGRE1Q14246 886 aa14.35□□□□□ -0.11
SENP3-204ENST00000580997 ADCK5Q3MIX3 580 aa14.35□□□□□ -0.11
SENP3-204ENST00000580997 APOA5Q6Q788 366 aa14.35□□□□□ -0.11
SENP3-204ENST00000580997 CYFIP1Q7L576 1253 aa14.35□□□□□ -0.11
SENP3-204ENST00000580997 SERINC5Q86VE9 423 aa14.35□□□□□ -0.11
SENP3-204ENST00000580997 HERC6Q8IVU3 1022 aa14.35□□□□□ -0.11
SENP3-204ENST00000580997 RASEFQ8IZ41 740 aa14.35□□□□□ -0.11
SENP3-204ENST00000580997 WNT8BQ93098 351 aa14.35□□□□□ -0.11
SENP3-204ENST00000580997 GAS2L1Q99501 681 aaPredicted RBP14.35□□□□□ -0.11
SENP3-204ENST00000580997 GPR20Q99678 358 aa14.35□□□□□ -0.11
SENP3-204ENST00000580997 COL25A1Q9BXS0 654 aaPredicted RBP14.35□□□□□ -0.11
SENP3-204ENST00000580997 SCN5AQ14524 2016 aa14.34□□□□□ -0.11
SENP3-204ENST00000580997 TANC1Q9C0D5 1861 aa14.34□□□□□ -0.11
SENP3-204ENST00000580997 GALR2O43603 387 aaPredicted RBP14.34□□□□□ -0.11
SENP3-204ENST00000580997 NBNO60934 754 aa14.34□□□□□ -0.11
SENP3-204ENST00000580997 KRT32Q14532 448 aa14.34□□□□□ -0.11
SENP3-204ENST00000580997 PPP2R2DQ66LE6 453 aa14.34□□□□□ -0.11
SENP3-204ENST00000580997 SYNE3Q6ZMZ3 975 aa14.34□□□□□ -0.11
SENP3-204ENST00000580997 NLRX1Q86UT6 975 aa14.34□□□□□ -0.11
SENP3-204ENST00000580997 MICU3Q86XE3 530 aa14.34□□□□□ -0.11
SENP3-204ENST00000580997 RAB11FIP4Q86YS3 637 aa14.34□□□□□ -0.11
SENP3-204ENST00000580997 CCDC82Q8N4S0 544 aa14.34□□□□□ -0.11
SENP3-204ENST00000580997 USP38Q8NB14 1042 aa14.34□□□□□ -0.11
SENP3-204ENST00000580997 GIMAP8Q8ND71 665 aaPredicted RBP14.34□□□□□ -0.11
SENP3-204ENST00000580997 KCNB2Q92953 911 aa14.34□□□□□ -0.11
SENP3-204ENST00000580997 RBM28Q9NW13 759 aaKnown RBP14.34□□□□□ -0.11
SENP3-204ENST00000580997 BRPF3Q9ULD4 1205 aa14.34□□□□□ -0.11
SENP3-204ENST00000580997 MUC3AQ02505 3323 aa14.34□□□□□ -0.11
SENP3-204ENST00000580997 MYH7BA7E2Y1 1941 aa14.33□□□□□ -0.11
SENP3-204ENST00000580997 hCG_1642624A0A1W2PR95 340 aa14.33□□□□□ -0.12
SENP3-204ENST00000580997 NOP56O00567 594 aaKnown RBP14.33□□□□□ -0.12
SENP3-204ENST00000580997 MAFGO15525 162 aa14.33□□□□□ -0.12
SENP3-204ENST00000580997 CA3P07451 260 aa14.33□□□□□ -0.12
SENP3-204ENST00000580997 HMGB1P09429 215 aaKnown RBP14.33□□□□□ -0.12
SENP3-204ENST00000580997 ITGB5P18084 799 aa14.33□□□□□ -0.12
SENP3-204ENST00000580997 RCAN1P53805 252 aa14.33□□□□□ -0.12
SENP3-204ENST00000580997 MBTPS1Q14703 1052 aa14.33□□□□□ -0.12
SENP3-204ENST00000580997 ZNF618Q5T7W0 954 aa14.33□□□□□ -0.12
SENP3-204ENST00000580997 CNKSR3Q6P9H4 555 aa14.33□□□□□ -0.12
SENP3-204ENST00000580997 GPRASP2Q96D09 838 aa14.33□□□□□ -0.12
SENP3-204ENST00000580997 CDHR1Q96JP9 859 aa14.33□□□□□ -0.12
SENP3-204ENST00000580997 RNPEPQ9H4A4 650 aa14.33□□□□□ -0.12
SENP3-204ENST00000580997 REV3LO60673 3130 aa14.33□□□□□ -0.12
SENP3-204ENST00000580997 ABHD14A-ACY1A0A1B0GW23 586 aa14.32□□□□□ -0.12
SENP3-204ENST00000580997 C17orf102A2RUQ5 167 aa14.32□□□□□ -0.12
SENP3-204ENST00000580997 ATP9AO75110 1047 aa14.32□□□□□ -0.12
SENP3-204ENST00000580997 SMIM10L2AP0DMW4 78 aa14.32□□□□□ -0.12
SENP3-204ENST00000580997 SMIM10L2BP0DMW5 78 aa14.32□□□□□ -0.12
SENP3-204ENST00000580997 KCNA2P16389 499 aa14.32□□□□□ -0.12
SENP3-204ENST00000580997 POU3F3P20264 500 aaPredicted RBP14.32□□□□□ -0.12
SENP3-204ENST00000580997 WDR5P61964 334 aaKnown RBP14.32□□□□□ -0.12
SENP3-204ENST00000580997 ADAM17P78536 824 aa14.32□□□□□ -0.12
SENP3-204ENST00000580997 ATP6V0A1Q93050 837 aa14.32□□□□□ -0.12
SENP3-204ENST00000580997 FAM217BQ9NTX9 383 aaPredicted RBP14.32□□□□□ -0.12
SENP3-204ENST00000580997 PCDHA6Q9UN73 950 aa14.32□□□□□ -0.12
SENP3-204ENST00000580997 TELO2Q9Y4R8 837 aa14.32□□□□□ -0.12
SENP3-204ENST00000580997 PCDHA8Q9Y5H6 950 aa14.32□□□□□ -0.12
SENP3-204ENST00000580997 UBIAD1Q9Y5Z9 338 aa14.32□□□□□ -0.12
SENP3-204ENST00000580997 EMSYQ7Z589 1322 aa14.32□□□□□ -0.12
SENP3-204ENST00000580997 SPDYE3A6NKU9 549 aa14.31□□□□□ -0.12
SENP3-204ENST00000580997 KIF28PB7ZC32 967 aa14.31□□□□□ -0.12
SENP3-204ENST00000580997 ZBTB43O43298 467 aa14.31□□□□□ -0.12
SENP3-204ENST00000580997 EFCAB14O75071 495 aa14.31□□□□□ -0.12
SENP3-204ENST00000580997 CAND2O75155 1236 aa14.31□□□□□ -0.12
SENP3-204ENST00000580997 KCNJ6P48051 423 aa14.31□□□□□ -0.12
SENP3-204ENST00000580997 UBE2SQ16763 222 aa14.31□□□□□ -0.12
SENP3-204ENST00000580997 TCTN1Q2MV58 587 aa14.31□□□□□ -0.12
SENP3-204ENST00000580997 WWC2Q6AWC2 1192 aa14.31□□□□□ -0.12
SENP3-204ENST00000580997 TYW1BQ6NUM6 668 aa14.31□□□□□ -0.12
SENP3-204ENST00000580997 HEATR3Q7Z4Q2 680 aa14.31□□□□□ -0.12
SENP3-204ENST00000580997 FBXL16Q8N461 479 aa14.31□□□□□ -0.12
SENP3-204ENST00000580997 TET1Q8NFU7 2136 aa14.31□□□□□ -0.12
SENP3-204ENST00000580997 TCEANC2Q96MN5 208 aa14.31□□□□□ -0.12
SENP3-204ENST00000580997 RIC8AQ9NPQ8 531 aa14.31□□□□□ -0.12
SENP3-204ENST00000580997 CNTNAP5Q8WYK1 1306 aa14.31□□□□□ -0.12
SENP3-204ENST00000580997 GBF1Q92538 1859 aa14.31□□□□□ -0.12
SENP3-204ENST00000580997 TRIP12Q14669 1992 aaPredicted RBP14.31□□□□□ -0.12
SENP3-204ENST00000580997 RSPH10B2B2RC85 870 aa14.3□□□□□ -0.12
SENP3-204ENST00000580997 hCG_1984214I3L0E3 225 aa14.3□□□□□ -0.12
SENP3-204ENST00000580997 TREHO43280 583 aa14.3□□□□□ -0.12
SENP3-204ENST00000580997 LGR5O75473 907 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms