RNA–Protein interactions for RNA: ENST00000580991.1

IFT20-211, Transcript of intraflagellar transport 20, humanhuman

TSL 4

Gene IFT20, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-211ENST00000580991 VPS53Q5VIR6 699 aa17.16■□□□□ 0.34
IFT20-211ENST00000580991 KCNV1Q6PIU1 500 aa17.16■□□□□ 0.34
IFT20-211ENST00000580991 FBXL6Q8N531 539 aa17.16■□□□□ 0.34
IFT20-211ENST00000580991 PI4K2BQ8TCG2 481 aa17.16■□□□□ 0.34
IFT20-211ENST00000580991 SPATA33Q96N06 139 aa17.16■□□□□ 0.34
IFT20-211ENST00000580991 DCTPP1Q9H773 170 aa17.16■□□□□ 0.34
IFT20-211ENST00000580991 CTSHP09668 335 aa17.15■□□□□ 0.34
IFT20-211ENST00000580991 GOLGA8HP0CJ92 632 aa17.15■□□□□ 0.34
IFT20-211ENST00000580991 HOXC8P31273 242 aa17.15■□□□□ 0.34
IFT20-211ENST00000580991 CELF3Q5SZQ8 465 aaKnown RBP17.15■□□□□ 0.34
IFT20-211ENST00000580991 C16orf70Q9BSU1 422 aa17.15■□□□□ 0.34
IFT20-211ENST00000580991 UBA5Q9GZZ9 404 aa17.15■□□□□ 0.34
IFT20-211ENST00000580991 IRF2BPLQ9H1B7 796 aa17.15■□□□□ 0.34
IFT20-211ENST00000580991 IGFLR1Q9H665 355 aa17.15■□□□□ 0.34
IFT20-211ENST00000580991 PXMP2Q9NR77 195 aa17.15■□□□□ 0.34
IFT20-211ENST00000580991 FAM186AA6NE01 2351 aa17.15■□□□□ 0.34
IFT20-211ENST00000580991 MYH6P13533 1939 aa17.14■□□□□ 0.33
IFT20-211ENST00000580991 H3BRB1 525 aa17.14■□□□□ 0.33
IFT20-211ENST00000580991 TREHO43280 583 aa17.14■□□□□ 0.33
IFT20-211ENST00000580991 EYA4O95677 639 aa17.14■□□□□ 0.33
IFT20-211ENST00000580991 HSPD1P10809 573 aaKnown RBP17.14■□□□□ 0.33
IFT20-211ENST00000580991 GTF2F1P35269 517 aaKnown RBP eCLIP17.14■□□□□ 0.33
IFT20-211ENST00000580991 NDUFV1P49821 464 aa17.14■□□□□ 0.33
IFT20-211ENST00000580991 ZXDAP98168 799 aa17.14■□□□□ 0.33
IFT20-211ENST00000580991 ADAM15Q13444 863 aa17.14■□□□□ 0.33
IFT20-211ENST00000580991 CLP1Q92989 425 aaKnown RBP17.14■□□□□ 0.33
IFT20-211ENST00000580991 PPP2R3CQ969Q6 453 aa17.14■□□□□ 0.33
IFT20-211ENST00000580991 OSBPL7Q9BZF2 842 aa17.14■□□□□ 0.33
IFT20-211ENST00000580991 CPVLQ9H3G5 476 aa17.14■□□□□ 0.33
IFT20-211ENST00000580991 TUT1Q9H6E5 874 aaKnown RBP17.14■□□□□ 0.33
IFT20-211ENST00000580991 MRPL11Q9Y3B7 192 aaKnown RBP17.14■□□□□ 0.33
IFT20-211ENST00000580991 LINC01565O15544 149 aa17.13■□□□□ 0.33
IFT20-211ENST00000580991 GGPS1O95749 300 aa17.13■□□□□ 0.33
IFT20-211ENST00000580991 FGAP02671 866 aa17.13■□□□□ 0.33
IFT20-211ENST00000580991 MMP1P03956 469 aa17.13■□□□□ 0.33
IFT20-211ENST00000580991 LINC00271P0C7V0 271 aa17.13■□□□□ 0.33
IFT20-211ENST00000580991 SMIM10L2AP0DMW4 78 aa17.13■□□□□ 0.33
IFT20-211ENST00000580991 SMIM10L2BP0DMW5 78 aa17.13■□□□□ 0.33
IFT20-211ENST00000580991 MSLNLQ96KJ4 702 aa17.13■□□□□ 0.33
IFT20-211ENST00000580991 PLVAPQ9BX97 442 aa17.13■□□□□ 0.33
IFT20-211ENST00000580991 RNPEPQ9H4A4 650 aa17.13■□□□□ 0.33
IFT20-211ENST00000580991 KMT2EQ8IZD2 1858 aa17.13■□□□□ 0.33
IFT20-211ENST00000580991 ADGRA3Q8IWK6 1321 aa17.13■□□□□ 0.33
IFT20-211ENST00000580991 LOC730098B7Z3J9 87 aa17.12■□□□□ 0.33
IFT20-211ENST00000580991 SORBS3O60504 671 aa17.12■□□□□ 0.33
IFT20-211ENST00000580991 RGS20O76081 388 aa17.12■□□□□ 0.33
IFT20-211ENST00000580991 CFBP00751 764 aa17.12■□□□□ 0.33
IFT20-211ENST00000580991 TGFB3P10600 412 aa17.12■□□□□ 0.33
IFT20-211ENST00000580991 PCP11498 1178 aaKnown RBP17.12■□□□□ 0.33
IFT20-211ENST00000580991 ADGRF4Q8IZF3 695 aa17.12■□□□□ 0.33
IFT20-211ENST00000580991 MLXIPQ9HAP2 919 aa17.12■□□□□ 0.33
IFT20-211ENST00000580991 FAM86C1Q9NVL1 165 aa17.12■□□□□ 0.33
IFT20-211ENST00000580991 MYO15AQ9UKN7 3530 aa17.12■□□□□ 0.33
IFT20-211ENST00000580991 GNAT1P11488 350 aa17.11■□□□□ 0.33
IFT20-211ENST00000580991 MYCLP12524 364 aaPredicted RBP17.11■□□□□ 0.33
IFT20-211ENST00000580991 SIGLEC14Q08ET2 396 aa17.11■□□□□ 0.33
IFT20-211ENST00000580991 CBX2Q14781 532 aaPredicted RBP17.11■□□□□ 0.33
IFT20-211ENST00000580991 QRICH1Q2TAL8 776 aa17.11■□□□□ 0.33
IFT20-211ENST00000580991 MFSD6Q6ZSS7 791 aa17.11■□□□□ 0.33
IFT20-211ENST00000580991 SMRP1Q8NCR6 262 aa17.11■□□□□ 0.33
IFT20-211ENST00000580991 ATOH1Q92858 354 aaPredicted RBP17.11■□□□□ 0.33
IFT20-211ENST00000580991 PDCD2LQ9BRP1 358 aa17.11■□□□□ 0.33
IFT20-211ENST00000580991 RC3H2Q9HBD1 1191 aaKnown RBP17.11■□□□□ 0.33
IFT20-211ENST00000580991 ALG13Q9NP73 1137 aaKnown RBP17.11■□□□□ 0.33
IFT20-211ENST00000580991 CSPG5O95196 566 aa17.1■□□□□ 0.33
IFT20-211ENST00000580991 LGALS2P05162 132 aa17.1■□□□□ 0.33
IFT20-211ENST00000580991 UBA1P22314 1058 aaKnown RBP17.1■□□□□ 0.33
IFT20-211ENST00000580991 HSD17B4P51659 736 aa17.1■□□□□ 0.33
IFT20-211ENST00000580991 SP2Q02086 613 aa17.1■□□□□ 0.33
IFT20-211ENST00000580991 COASYQ13057 564 aa17.1■□□□□ 0.33
IFT20-211ENST00000580991 CAMK1Q14012 370 aa17.1■□□□□ 0.33
IFT20-211ENST00000580991 BTG3Q14201 252 aaPredicted RBP17.1■□□□□ 0.33
IFT20-211ENST00000580991 FAM26DQ5JW98 314 aa17.1■□□□□ 0.33
IFT20-211ENST00000580991 VSIG10LQ86VR7 867 aa17.1■□□□□ 0.33
IFT20-211ENST00000580991 DGKHQ86XP1 1220 aa17.1■□□□□ 0.33
IFT20-211ENST00000580991 P2RX5Q93086 422 aa17.1■□□□□ 0.33
IFT20-211ENST00000580991 USP26Q9BXU7 913 aa17.1■□□□□ 0.33
IFT20-211ENST00000580991 HELLSQ9NRZ9 838 aa17.1■□□□□ 0.33
IFT20-211ENST00000580991 PLAGL2Q9UPG8 496 aa17.1■□□□□ 0.33
IFT20-211ENST00000580991 CCDC171Q6TFL3 1326 aa17.1■□□□□ 0.33
IFT20-211ENST00000580991 TTC3P53804 2025 aa17.09■□□□□ 0.33
IFT20-211ENST00000580991 WDR87Q6ZQQ6 2873 aa17.09■□□□□ 0.33
IFT20-211ENST00000580991 RRP1P56182 461 aaKnown RBP17.09■□□□□ 0.33
IFT20-211ENST00000580991 ASPRV1Q53RT3 343 aa17.09■□□□□ 0.33
IFT20-211ENST00000580991 STOX1Q6ZVD7 989 aa17.09■□□□□ 0.33
IFT20-211ENST00000580991 EFHBQ8N7U6 833 aa17.09■□□□□ 0.33
IFT20-211ENST00000580991 PNMA1Q8ND90 353 aa17.09■□□□□ 0.33
IFT20-211ENST00000580991 ZNF689Q96CS4 500 aaPredicted RBP17.09■□□□□ 0.33
IFT20-211ENST00000580991 SETD4Q9NVD3 440 aa17.09■□□□□ 0.33
IFT20-211ENST00000580991 MAP3K20Q9NYL2 800 aaKnown RBP17.09■□□□□ 0.33
IFT20-211ENST00000580991 CLEC1BQ9P126 229 aa17.09■□□□□ 0.33
IFT20-211ENST00000580991 ZMYM6O95789 1325 aa17.09■□□□□ 0.33
IFT20-211ENST00000580991 KAT6AQ92794 2004 aa17.08■□□□□ 0.33
IFT20-211ENST00000580991 NOP56O00567 594 aaKnown RBP17.08■□□□□ 0.32
IFT20-211ENST00000580991 DHX16O60231 1041 aaKnown RBP17.08■□□□□ 0.32
IFT20-211ENST00000580991 MX1P20591 662 aa17.08■□□□□ 0.32
IFT20-211ENST00000580991 AVPR2P30518 371 aa17.08■□□□□ 0.32
IFT20-211ENST00000580991 VCPP55072 806 aaKnown RBP17.08■□□□□ 0.32
IFT20-211ENST00000580991 HAND2P61296 217 aa17.08■□□□□ 0.32
IFT20-211ENST00000580991 GHRHRQ02643 423 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms