RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 MTG1Q9BT17 334 aaPredicted RBP11.28□□□□□ -0.6
GGA3-209ENST00000580646 ANO3Q9BYT9 981 aa11.28□□□□□ -0.6
GGA3-209ENST00000580646 BRMS1Q9HCU9 246 aa11.28□□□□□ -0.6
GGA3-209ENST00000580646 DOCK5Q9H7D0 1870 aa11.27□□□□□ -0.6
GGA3-209ENST00000580646 WDR81Q562E7 1941 aa11.27□□□□□ -0.6
GGA3-209ENST00000580646 GH1P01241 217 aa11.27□□□□□ -0.61
GGA3-209ENST00000580646 MMP1P03956 469 aa11.27□□□□□ -0.61
GGA3-209ENST00000580646 CYP3A4P08684 503 aa11.27□□□□□ -0.61
GGA3-209ENST00000580646 TGFB3P10600 412 aa11.27□□□□□ -0.61
GGA3-209ENST00000580646 MYCLP12524 364 aaPredicted RBP11.27□□□□□ -0.61
GGA3-209ENST00000580646 ARHGAP1Q07960 439 aa11.27□□□□□ -0.61
GGA3-209ENST00000580646 DEFB123Q8N688 67 aa11.27□□□□□ -0.61
GGA3-209ENST00000580646 FBXO18Q8NFZ0 1043 aa11.27□□□□□ -0.61
GGA3-209ENST00000580646 AFG1LQ8WV93 481 aa11.27□□□□□ -0.61
GGA3-209ENST00000580646 C8orf76Q96K31 380 aa11.27□□□□□ -0.61
GGA3-209ENST00000580646 PKNOX2Q96KN3 472 aa11.27□□□□□ -0.61
GGA3-209ENST00000580646 INPP4AQ96PE3 977 aaPredicted RBP11.27□□□□□ -0.61
GGA3-209ENST00000580646 PPP1R12CQ9BZL4 782 aa11.27□□□□□ -0.61
GGA3-209ENST00000580646 TRPV6Q9H1D0 765 aa11.27□□□□□ -0.61
GGA3-209ENST00000580646 DDX41Q9UJV9 622 aaKnown RBP11.27□□□□□ -0.61
GGA3-209ENST00000580646 SMC3Q9UQE7 1217 aa11.27□□□□□ -0.61
GGA3-209ENST00000580646 MAFGO15525 162 aa11.26□□□□□ -0.61
GGA3-209ENST00000580646 B4GALT4O60513 344 aa11.26□□□□□ -0.61
GGA3-209ENST00000580646 GJB2P29033 226 aa11.26□□□□□ -0.61
GGA3-209ENST00000580646 ICAM3P32942 547 aa11.26□□□□□ -0.61
GGA3-209ENST00000580646 CYP2C18P33260 490 aa11.26□□□□□ -0.61
GGA3-209ENST00000580646 KRT2P35908 639 aa11.26□□□□□ -0.61
GGA3-209ENST00000580646 USP11P51784 963 aa11.26□□□□□ -0.61
GGA3-209ENST00000580646 MRPS9P82933 396 aaKnown RBP11.26□□□□□ -0.61
GGA3-209ENST00000580646 PPIGQ13427 754 aaKnown RBP eCLIP11.26□□□□□ -0.61
GGA3-209ENST00000580646 NBPF20Q3BBV1 942 aa11.26□□□□□ -0.61
GGA3-209ENST00000580646 GNPTABQ3T906 1256 aa11.26□□□□□ -0.61
GGA3-209ENST00000580646 KRT40Q6A162 431 aa11.26□□□□□ -0.61
GGA3-209ENST00000580646 Q7L0L9 218 aa11.26□□□□□ -0.61
GGA3-209ENST00000580646 NIPA1Q7RTP0 329 aa11.26□□□□□ -0.61
GGA3-209ENST00000580646 KRT25Q7Z3Z0 450 aa11.26□□□□□ -0.61
GGA3-209ENST00000580646 TMEM199Q8N511 208 aa11.26□□□□□ -0.61
GGA3-209ENST00000580646 IL31RAQ8NI17 732 aa11.26□□□□□ -0.61
GGA3-209ENST00000580646 CDHR1Q96JP9 859 aa11.26□□□□□ -0.61
GGA3-209ENST00000580646 RNPC3Q96LT9 517 aaKnown RBP11.26□□□□□ -0.61
GGA3-209ENST00000580646 HIPK3Q9H422 1215 aa11.26□□□□□ -0.61
GGA3-209ENST00000580646 TMEM260Q9NX78 707 aa11.26□□□□□ -0.61
GGA3-209ENST00000580646 KCNJ14Q9UNX9 436 aa11.26□□□□□ -0.61
GGA3-209ENST00000580646 MRVI1Q9Y6F6 885 aa11.26□□□□□ -0.61
GGA3-209ENST00000580646 MYH15Q9Y2K3 1946 aa11.26□□□□□ -0.61
GGA3-209ENST00000580646 LTBP2Q14767 1821 aa11.25□□□□□ -0.61
GGA3-209ENST00000580646 RGS20O76081 388 aa11.25□□□□□ -0.61
GGA3-209ENST00000580646 MMP3P08254 477 aa11.25□□□□□ -0.61
GGA3-209ENST00000580646 SUPT20HL2P0C7V6 817 aa11.25□□□□□ -0.61
GGA3-209ENST00000580646 PDIA4P13667 645 aaKnown RBP11.25□□□□□ -0.61
GGA3-209ENST00000580646 CSF2RAP15509 400 aa11.25□□□□□ -0.61
GGA3-209ENST00000580646 PDCP20941 246 aa11.25□□□□□ -0.61
GGA3-209ENST00000580646 CIITAP33076 1130 aa11.25□□□□□ -0.61
GGA3-209ENST00000580646 ARHGAP4P98171 946 aa11.25□□□□□ -0.61
GGA3-209ENST00000580646 LAMC2Q13753 1193 aa11.25□□□□□ -0.61
GGA3-209ENST00000580646 SAFBQ15424 915 aaKnown RBP eCLIP11.25□□□□□ -0.61
GGA3-209ENST00000580646 FAM47CQ5HY64 1035 aa11.25□□□□□ -0.61
GGA3-209ENST00000580646 JAKMIP3Q5VZ66 844 aa11.25□□□□□ -0.61
GGA3-209ENST00000580646 FAM109BQ6ICB4 259 aaPredicted RBP11.25□□□□□ -0.61
GGA3-209ENST00000580646 MOXD1Q6UVY6 613 aa11.25□□□□□ -0.61
GGA3-209ENST00000580646 C16orf59Q7L2K0 433 aa11.25□□□□□ -0.61
GGA3-209ENST00000580646 NLRX1Q86UT6 975 aa11.25□□□□□ -0.61
GGA3-209ENST00000580646 TNFRSF25Q93038 417 aa11.25□□□□□ -0.61
GGA3-209ENST00000580646 EMID1Q96A84 441 aaPredicted RBP11.25□□□□□ -0.61
GGA3-209ENST00000580646 GPRASP2Q96D09 838 aa11.25□□□□□ -0.61
GGA3-209ENST00000580646 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.25□□□□□ -0.612e-7■■□□□ 14.2
GGA3-209ENST00000580646 NOC4LQ9BVI4 516 aaKnown RBP11.25□□□□□ -0.61
GGA3-209ENST00000580646 FOXP1Q9H334 677 aaPredicted RBP11.25□□□□□ -0.61
GGA3-209ENST00000580646 TRMT13Q9NUP7 481 aaKnown RBP11.25□□□□□ -0.61
GGA3-209ENST00000580646 MTMR10Q9NXD2 777 aa11.25□□□□□ -0.61
GGA3-209ENST00000580646 UBIAD1Q9Y5Z9 338 aa11.25□□□□□ -0.61
GGA3-209ENST00000580646 CCDC194A0A1B0GVG4 234 aa11.24□□□□□ -0.61
GGA3-209ENST00000580646 ADAMTS3O15072 1205 aa11.24□□□□□ -0.61
GGA3-209ENST00000580646 FIBPO43427 364 aa11.24□□□□□ -0.61
GGA3-209ENST00000580646 ACRP10323 421 aa11.24□□□□□ -0.61
GGA3-209ENST00000580646 SMAD3P84022 425 aaKnown RBP11.24□□□□□ -0.61
GGA3-209ENST00000580646 SETQ01105 290 aaPredicted RBP11.24□□□□□ -0.61
GGA3-209ENST00000580646 PTPN11Q06124 597 aaPredicted RBP11.24□□□□□ -0.61
GGA3-209ENST00000580646 NONOQ15233 471 aaKnown RBP eCLIP11.24□□□□□ -0.61
GGA3-209ENST00000580646 DGKDQ16760 1214 aa11.24□□□□□ -0.61
GGA3-209ENST00000580646 GLIPR1L2Q4G1C9 344 aa11.24□□□□□ -0.61
GGA3-209ENST00000580646 CEP55Q53EZ4 464 aa11.24□□□□□ -0.61
GGA3-209ENST00000580646 TMEM240Q5SV17 173 aa11.24□□□□□ -0.61
GGA3-209ENST00000580646 NFRKBQ6P4R8 1299 aa11.24□□□□□ -0.61
GGA3-209ENST00000580646 DHX37Q8IY37 1157 aaKnown RBP11.24□□□□□ -0.61
GGA3-209ENST00000580646 DIS3L2Q8IYB7 885 aaKnown RBP11.24□□□□□ -0.61
GGA3-209ENST00000580646 GIMAP8Q8ND71 665 aaPredicted RBP11.24□□□□□ -0.61
GGA3-209ENST00000580646 RASGRP4Q8TDF6 673 aa11.24□□□□□ -0.61
GGA3-209ENST00000580646 PPP1R13LQ8WUF5 828 aa11.24□□□□□ -0.61
GGA3-209ENST00000580646 ZFP91Q96JP5 570 aaPredicted RBP11.24□□□□□ -0.61
GGA3-209ENST00000580646 NAP1L4Q99733 375 aaKnown RBP11.24□□□□□ -0.61
GGA3-209ENST00000580646 SENP7Q9BQF6 1050 aa11.24□□□□□ -0.61
GGA3-209ENST00000580646 MXRA8Q9BRK3 442 aa11.24□□□□□ -0.61
GGA3-209ENST00000580646 IL23AQ9NPF7 189 aa11.24□□□□□ -0.61
GGA3-209ENST00000580646 JADE2Q9NQC1 790 aa11.24□□□□□ -0.61
GGA3-209ENST00000580646 GJB4Q9NTQ9 266 aa11.24□□□□□ -0.61
GGA3-209ENST00000580646 UMODL1Q5DID0 1318 aa11.24□□□□□ -0.61
GGA3-209ENST00000580646 CYP3A7-CYP3A51PA0A087WV96 503 aa11.23□□□□□ -0.61
GGA3-209ENST00000580646 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.23□□□□□ -0.61
GGA3-209ENST00000580646 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms