RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 ZNF408Q9H9D4 720 aa16.58■□□□□ 0.25
CDK5RAP3-218ENST00000580391 PKD2L1Q9P0L9 805 aa16.58■□□□□ 0.25
CDK5RAP3-218ENST00000580391 UBIAD1Q9Y5Z9 338 aa16.58■□□□□ 0.25
CDK5RAP3-218ENST00000580391 CXCL11O14625 94 aa16.58■□□□□ 0.24
CDK5RAP3-218ENST00000580391 PLA2G4BP0C869 781 aa16.58■□□□□ 0.24
CDK5RAP3-218ENST00000580391 TKFCQ3LXA3 575 aa16.58■□□□□ 0.24
CDK5RAP3-218ENST00000580391 LBX2Q6XYB7 198 aa16.58■□□□□ 0.24
CDK5RAP3-218ENST00000580391 UNC13DQ70J99 1090 aa16.58■□□□□ 0.24
CDK5RAP3-218ENST00000580391 CCDC186Q7Z3E2 898 aa16.58■□□□□ 0.24
CDK5RAP3-218ENST00000580391 CCDC47Q96A33 483 aaKnown RBP16.58■□□□□ 0.24
CDK5RAP3-218ENST00000580391 KCNF1Q9H3M0 494 aa16.58■□□□□ 0.24
CDK5RAP3-218ENST00000580391 UNC45AQ9H3U1 944 aa16.58■□□□□ 0.24
CDK5RAP3-218ENST00000580391 A1CFQ9NQ94 594 aaKnown RBP16.58■□□□□ 0.24
CDK5RAP3-218ENST00000580391 KCNH7Q9NS40 1196 aa16.58■□□□□ 0.24
CDK5RAP3-218ENST00000580391 RGL1Q9NZL6 768 aa16.58■□□□□ 0.24
CDK5RAP3-218ENST00000580391 RWDD2AQ9UIY3 292 aa16.58■□□□□ 0.24
CDK5RAP3-218ENST00000580391 TRIM49BA6NDI0 452 aa16.57■□□□□ 0.24
CDK5RAP3-218ENST00000580391 IPO5O00410 1097 aaKnown RBP16.57■□□□□ 0.24
CDK5RAP3-218ENST00000580391 SERPINC1P01008 464 aa16.57■□□□□ 0.24
CDK5RAP3-218ENST00000580391 BCRP11274 1271 aa16.57■□□□□ 0.24
CDK5RAP3-218ENST00000580391 MYCLP12524 364 aaPredicted RBP16.57■□□□□ 0.24
CDK5RAP3-218ENST00000580391 GJA5P36382 358 aa16.57■□□□□ 0.24
CDK5RAP3-218ENST00000580391 PSMC6P62333 389 aa16.57■□□□□ 0.24
CDK5RAP3-218ENST00000580391 STK4Q13043 487 aa16.57■□□□□ 0.24
CDK5RAP3-218ENST00000580391 SEMA3FQ13275 785 aa16.57■□□□□ 0.24
CDK5RAP3-218ENST00000580391 ARHGEF16Q5VV41 709 aa16.57■□□□□ 0.24
CDK5RAP3-218ENST00000580391 NIPA1Q7RTP0 329 aa16.57■□□□□ 0.24
CDK5RAP3-218ENST00000580391 KIAA0895Q8NCT3 520 aa16.57■□□□□ 0.24
CDK5RAP3-218ENST00000580391 DNAJC19Q96DA6 116 aa16.57■□□□□ 0.24
CDK5RAP3-218ENST00000580391 TEKT3Q9BXF9 490 aa16.57■□□□□ 0.24
CDK5RAP3-218ENST00000580391 BTBD7Q9P203 1132 aa16.57■□□□□ 0.24
CDK5RAP3-218ENST00000580391 LRRC37A2A6NM11 1700 aa16.57■□□□□ 0.24
CDK5RAP3-218ENST00000580391 DDX39AO00148 427 aaKnown RBP16.57■□□□□ 0.24
CDK5RAP3-218ENST00000580391 IDEP14735 1019 aa16.57■□□□□ 0.24
CDK5RAP3-218ENST00000580391 HOXA7P31268 230 aaPredicted RBP16.57■□□□□ 0.24
CDK5RAP3-218ENST00000580391 UBASH3AP57075 661 aa16.57■□□□□ 0.24
CDK5RAP3-218ENST00000580391 IRX3P78415 501 aaPredicted RBP16.57■□□□□ 0.24
CDK5RAP3-218ENST00000580391 MOGSQ13724 837 aa16.57■□□□□ 0.24
CDK5RAP3-218ENST00000580391 CNNM4Q6P4Q7 775 aa16.57■□□□□ 0.24
CDK5RAP3-218ENST00000580391 B3GNT9Q6UX72 402 aa16.57■□□□□ 0.24
CDK5RAP3-218ENST00000580391 GPBP1Q86WP2 473 aa16.57■□□□□ 0.24
CDK5RAP3-218ENST00000580391 POLR3CQ9BUI4 534 aaPredicted RBP16.57■□□□□ 0.24
CDK5RAP3-218ENST00000580391 CYP39A1Q9NYL5 469 aa16.57■□□□□ 0.24
CDK5RAP3-218ENST00000580391 STK24Q9Y6E0 443 aa16.57■□□□□ 0.24
CDK5RAP3-218ENST00000580391 MYH11P35749 1972 aa16.56■□□□□ 0.24
CDK5RAP3-218ENST00000580391 PVALEFA0A1B0GWK0 134 aa16.56■□□□□ 0.24
CDK5RAP3-218ENST00000580391 PMS1P54277 932 aaKnown RBP16.56■□□□□ 0.24
CDK5RAP3-218ENST00000580391 SLC12A3P55017 1021 aa16.56■□□□□ 0.24
CDK5RAP3-218ENST00000580391 ITGB3BPQ13352 177 aaPredicted RBP16.56■□□□□ 0.24
CDK5RAP3-218ENST00000580391 LDLRAD1Q5T700 205 aa16.56■□□□□ 0.24
CDK5RAP3-218ENST00000580391 CDKAL1Q5VV42 579 aa16.56■□□□□ 0.24
CDK5RAP3-218ENST00000580391 FAM43AQ8N2R8 423 aa16.56■□□□□ 0.24
CDK5RAP3-218ENST00000580391 DYDC2Q96IM9 177 aa16.56■□□□□ 0.24
CDK5RAP3-218ENST00000580391 NAP1L5Q96NT1 182 aaPredicted RBP16.56■□□□□ 0.24
CDK5RAP3-218ENST00000580391 LRRC27Q9C0I9 530 aa16.56■□□□□ 0.24
CDK5RAP3-218ENST00000580391 ASCC2Q9H1I8 757 aaPredicted RBP16.56■□□□□ 0.24
CDK5RAP3-218ENST00000580391 JADE2Q9NQC1 790 aa16.56■□□□□ 0.24
CDK5RAP3-218ENST00000580391 INTS13Q9NVM9 706 aa16.56■□□□□ 0.24
CDK5RAP3-218ENST00000580391 AGTPBP1Q9UPW5 1226 aa16.56■□□□□ 0.24
CDK5RAP3-218ENST00000580391 NPHP3-ACAD11A0A0J9YXS1 232 aa16.55■□□□□ 0.24
CDK5RAP3-218ENST00000580391 CYP11B2P19099 503 aa16.55■□□□□ 0.24
CDK5RAP3-218ENST00000580391 CACNB1Q02641 598 aaPredicted RBP16.55■□□□□ 0.24
CDK5RAP3-218ENST00000580391 EHHADHQ08426 723 aa16.55■□□□□ 0.24
CDK5RAP3-218ENST00000580391 PABPC4Q13310 644 aaKnown RBP eCLIP16.55■□□□□ 0.242e-7■■■□□ 15.2
CDK5RAP3-218ENST00000580391 STIM1Q13586 685 aa16.55■□□□□ 0.24
CDK5RAP3-218ENST00000580391 MTMR1Q13613 665 aa16.55■□□□□ 0.24
CDK5RAP3-218ENST00000580391 CTTNQ14247 550 aaKnown RBP16.55■□□□□ 0.24
CDK5RAP3-218ENST00000580391 RIT2Q99578 217 aa16.55■□□□□ 0.24
CDK5RAP3-218ENST00000580391 AGO4Q9HCK5 861 aaKnown RBP16.55■□□□□ 0.24
CDK5RAP3-218ENST00000580391 SLC39A2Q9NP94 309 aa16.55■□□□□ 0.24
CDK5RAP3-218ENST00000580391 PSMA7O14818 248 aa16.55■□□□□ 0.24
CDK5RAP3-218ENST00000580391 CDK11BP21127 795 aaKnown RBP16.55■□□□□ 0.24
CDK5RAP3-218ENST00000580391 MSNP26038 577 aaKnown RBP16.55■□□□□ 0.24
CDK5RAP3-218ENST00000580391 COASYQ13057 564 aa16.55■□□□□ 0.24
CDK5RAP3-218ENST00000580391 PTPN21Q16825 1174 aa16.55■□□□□ 0.24
CDK5RAP3-218ENST00000580391 TPD52L1Q16890 204 aaPredicted RBP16.55■□□□□ 0.24
CDK5RAP3-218ENST00000580391 TMC6Q7Z403 805 aa16.55■□□□□ 0.24
CDK5RAP3-218ENST00000580391 FILIP1Q7Z7B0 1213 aa16.55■□□□□ 0.24
CDK5RAP3-218ENST00000580391 HSD17B14Q9BPX1 270 aa16.55■□□□□ 0.24
CDK5RAP3-218ENST00000580391 PAGR1Q9BTK6 254 aa16.55■□□□□ 0.24
CDK5RAP3-218ENST00000580391 TESPA1A2RU30 521 aaPredicted RBP16.54■□□□□ 0.24
CDK5RAP3-218ENST00000580391 DHX15O43143 795 aaKnown RBP16.54■□□□□ 0.24
CDK5RAP3-218ENST00000580391 CBFA2T2O43439 604 aa16.54■□□□□ 0.24
CDK5RAP3-218ENST00000580391 HERVK_113P62684 666 aa16.54■□□□□ 0.24
CDK5RAP3-218ENST00000580391 RAD51AP2Q09MP3 1159 aa16.54■□□□□ 0.24
CDK5RAP3-218ENST00000580391 APTXQ7Z2E3 356 aaKnown RBP16.54■□□□□ 0.24
CDK5RAP3-218ENST00000580391 MB21D1Q8N884 522 aa16.54■□□□□ 0.24
CDK5RAP3-218ENST00000580391 RRAGCQ9HB90 399 aa16.54■□□□□ 0.24
CDK5RAP3-218ENST00000580391 TUFT1Q9NNX1 390 aa16.54■□□□□ 0.24
CDK5RAP3-218ENST00000580391 RTN4Q9NQC3 1192 aaKnown RBP16.54■□□□□ 0.24
CDK5RAP3-218ENST00000580391 DNM3Q9UQ16 869 aa16.54■□□□□ 0.24
CDK5RAP3-218ENST00000580391 CNMDO75829 334 aa16.53■□□□□ 0.24
CDK5RAP3-218ENST00000580391 SLITRK3O94933 977 aa16.53■□□□□ 0.24
CDK5RAP3-218ENST00000580391 NR3C2P08235 984 aa16.53■□□□□ 0.24
CDK5RAP3-218ENST00000580391 CCND2P30279 289 aa16.53■□□□□ 0.24
CDK5RAP3-218ENST00000580391 ARID5BQ14865 1188 aa16.53■□□□□ 0.24
CDK5RAP3-218ENST00000580391 ARSHQ5FYA8 562 aa16.53■□□□□ 0.24
CDK5RAP3-218ENST00000580391 GLIS3Q8NEA6 775 aa16.53■□□□□ 0.24
CDK5RAP3-218ENST00000580391 CHST13Q8NET6 341 aa16.53■□□□□ 0.24
CDK5RAP3-218ENST00000580391 SPATC1LQ9H0A9 340 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms