RNA–Protein interactions for RNA: ENST00000579243.1

USH1G-201, Transcript of USH1 protein network component sans, humanhuman

TSL 2

Gene USH1G, Length 1,673 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1G-201ENST00000579243 FOSP01100 380 aaPredicted RBP22.74■■□□□ 1.23
USH1G-201ENST00000579243 ICAM3P32942 547 aa22.74■■□□□ 1.23
USH1G-201ENST00000579243 CLK2P49760 499 aaKnown RBP22.74■■□□□ 1.23
USH1G-201ENST00000579243 LAMC2Q13753 1193 aa22.74■■□□□ 1.23
USH1G-201ENST00000579243 KRT40Q6A162 431 aa22.74■■□□□ 1.23
USH1G-201ENST00000579243 CHRDL2Q6WN34 429 aa22.74■■□□□ 1.23
USH1G-201ENST00000579243 BRAPQ7Z569 592 aa22.74■■□□□ 1.23
USH1G-201ENST00000579243 SLC43A3Q8NBI5 491 aa22.74■■□□□ 1.23
USH1G-201ENST00000579243 CCDC12Q8WUD4 166 aaPredicted RBP22.74■■□□□ 1.23
USH1G-201ENST00000579243 COLQQ9Y215 455 aaPredicted RBP22.74■■□□□ 1.23
USH1G-201ENST00000579243 GRIN2DO15399 1336 aa22.74■■□□□ 1.23
USH1G-201ENST00000579243 SPATA31C2B4DYI2 1134 aa22.74■■□□□ 1.23
USH1G-201ENST00000579243 KPNA6O60684 536 aa22.74■■□□□ 1.23
USH1G-201ENST00000579243 ITGA7Q13683 1181 aa22.74■■□□□ 1.23
USH1G-201ENST00000579243 TRIM29Q14134 588 aa22.74■■□□□ 1.23
USH1G-201ENST00000579243 MYSM1Q5VVJ2 828 aa22.74■■□□□ 1.23
USH1G-201ENST00000579243 DHX37Q8IY37 1157 aaKnown RBP22.74■■□□□ 1.23
USH1G-201ENST00000579243 ZNF396Q96N95 335 aaPredicted RBP22.74■■□□□ 1.23
USH1G-201ENST00000579243 PDLIM7Q9NR12 457 aa22.74■■□□□ 1.23
USH1G-201ENST00000579243 PCDH10Q9P2E7 1040 aa22.74■■□□□ 1.23
USH1G-201ENST00000579243 CFAP45Q9UL16 551 aa22.74■■□□□ 1.23
USH1G-201ENST00000579243 DCDC2CA8MYV0 355 aa22.73■■□□□ 1.23
USH1G-201ENST00000579243 MMP3P08254 477 aa22.73■■□□□ 1.23
USH1G-201ENST00000579243 UBA1P22314 1058 aaKnown RBP22.73■■□□□ 1.23
USH1G-201ENST00000579243 PSMC6P62333 389 aa22.73■■□□□ 1.23
USH1G-201ENST00000579243 FAAP100Q0VG06 881 aa22.73■■□□□ 1.23
USH1G-201ENST00000579243 SEMA3FQ13275 785 aa22.73■■□□□ 1.23
USH1G-201ENST00000579243 CELF3Q5SZQ8 465 aaKnown RBP22.73■■□□□ 1.23
USH1G-201ENST00000579243 LEO1Q8WVC0 666 aaPredicted RBP22.73■■□□□ 1.23
USH1G-201ENST00000579243 SPATA32Q96LK8 384 aa22.73■■□□□ 1.23
USH1G-201ENST00000579243 GDF15Q99988 308 aa22.73■■□□□ 1.23
USH1G-201ENST00000579243 MTG1Q9BT17 334 aaPredicted RBP22.73■■□□□ 1.23
USH1G-201ENST00000579243 PRO3102Q9H379 93 aa22.73■■□□□ 1.23
USH1G-201ENST00000579243 EHMT1Q9H9B1 1298 aa22.73■■□□□ 1.23
USH1G-201ENST00000579243 C6orf50Q9HD87 102 aa22.73■■□□□ 1.23
USH1G-201ENST00000579243 GJB4Q9NTQ9 266 aa22.73■■□□□ 1.23
USH1G-201ENST00000579243 TMEM260Q9NX78 707 aa22.73■■□□□ 1.23
USH1G-201ENST00000579243 PRKAG2Q9UGJ0 569 aa22.73■■□□□ 1.23
USH1G-201ENST00000579243 MROH7Q68CQ1 1323 aa22.73■■□□□ 1.23
USH1G-201ENST00000579243 GGPS1O95749 300 aa22.72■■□□□ 1.23
USH1G-201ENST00000579243 CLTBP09497 229 aa22.72■■□□□ 1.23
USH1G-201ENST00000579243 AP3B2Q13367 1082 aa22.72■■□□□ 1.23
USH1G-201ENST00000579243 SH3RF1Q7Z6J0 888 aa22.72■■□□□ 1.23
USH1G-201ENST00000579243 PGBD1Q96JS3 809 aa22.72■■□□□ 1.23
USH1G-201ENST00000579243 SEZ6LQ9BYH1 1024 aa22.72■■□□□ 1.23
USH1G-201ENST00000579243 ANO3Q9BYT9 981 aa22.72■■□□□ 1.23
USH1G-201ENST00000579243 TRIM43BA6NCK2 446 aa22.71■■□□□ 1.23
USH1G-201ENST00000579243 ADAMTS3O15072 1205 aa22.71■■□□□ 1.23
USH1G-201ENST00000579243 GNA11P29992 359 aa22.71■■□□□ 1.23
USH1G-201ENST00000579243 MAGEA10P43363 369 aaPredicted RBP22.71■■□□□ 1.23
USH1G-201ENST00000579243 NLRX1Q86UT6 975 aa22.71■■□□□ 1.23
USH1G-201ENST00000579243 PPTC7Q8NI37 304 aa22.71■■□□□ 1.23
USH1G-201ENST00000579243 SYAP1Q96A49 352 aaPredicted RBP22.71■■□□□ 1.23
USH1G-201ENST00000579243 TRIM43Q96BQ3 446 aaPredicted RBP22.71■■□□□ 1.23
USH1G-201ENST00000579243 BCAS3Q9H6U6 928 aa22.71■■□□□ 1.23
USH1G-201ENST00000579243 PRDM5Q9NQX1 630 aaPredicted RBP22.71■■□□□ 1.23
USH1G-201ENST00000579243 SH3GLB2Q9NR46 395 aa22.71■■□□□ 1.23
USH1G-201ENST00000579243 VPS54Q9P1Q0 977 aa22.71■■□□□ 1.23
USH1G-201ENST00000579243 TFIP11Q9UBB9 837 aaKnown RBP22.71■■□□□ 1.23
USH1G-201ENST00000579243 UBIAD1Q9Y5Z9 338 aa22.71■■□□□ 1.23
USH1G-201ENST00000579243 ITGB5P18084 799 aa22.71■■□□□ 1.23
USH1G-201ENST00000579243 JAKMIP3Q5VZ66 844 aa22.71■■□□□ 1.23
USH1G-201ENST00000579243 CCDC148Q8NFR7 591 aa22.71■■□□□ 1.23
USH1G-201ENST00000579243 TMEM63CQ9P1W3 806 aa22.71■■□□□ 1.23
USH1G-201ENST00000579243 KIF28PB7ZC32 967 aa22.7■■□□□ 1.22
USH1G-201ENST00000579243 SORBS3O60504 671 aa22.7■■□□□ 1.22
USH1G-201ENST00000579243 DGKDQ16760 1214 aa22.7■■□□□ 1.22
USH1G-201ENST00000579243 HSDL1Q3SXM5 330 aa22.7■■□□□ 1.22
USH1G-201ENST00000579243 FAM126BQ8IXS8 530 aa22.7■■□□□ 1.22
USH1G-201ENST00000579243 GPRASP2Q96D09 838 aa22.7■■□□□ 1.22
USH1G-201ENST00000579243 SPATA33Q96N06 139 aa22.7■■□□□ 1.22
USH1G-201ENST00000579243 SENP7Q9BQF6 1050 aa22.7■■□□□ 1.22
USH1G-201ENST00000579243 MLXIPQ9HAP2 919 aa22.7■■□□□ 1.22
USH1G-201ENST00000579243 SREBF1P36956 1147 aa22.69■■□□□ 1.22
USH1G-201ENST00000579243 NEDD9Q14511 834 aa22.69■■□□□ 1.22
USH1G-201ENST00000579243 ZSCAN23Q3MJ62 389 aa22.69■■□□□ 1.22
USH1G-201ENST00000579243 JADE2Q9NQC1 790 aa22.69■■□□□ 1.22
USH1G-201ENST00000579243 TMEM39AQ9NV64 488 aa22.69■■□□□ 1.22
USH1G-201ENST00000579243 KIAA0355O15063 1070 aa22.68■■□□□ 1.22
USH1G-201ENST00000579243 PPFIA4O75335 1185 aa22.68■■□□□ 1.22
USH1G-201ENST00000579243 CD4P01730 458 aa22.68■■□□□ 1.22
USH1G-201ENST00000579243 HOXD8P13378 290 aaPredicted RBP22.68■■□□□ 1.22
USH1G-201ENST00000579243 BMP8BP34820 402 aa22.68■■□□□ 1.22
USH1G-201ENST00000579243 MDM2Q00987 491 aaPredicted RBP22.68■■□□□ 1.22
USH1G-201ENST00000579243 NBPF20Q3BBV1 942 aa22.68■■□□□ 1.22
USH1G-201ENST00000579243 MCTP2Q6DN12 878 aa22.68■■□□□ 1.22
USH1G-201ENST00000579243 CYFIP1Q7L576 1253 aa22.68■■□□□ 1.22
USH1G-201ENST00000579243 REXO1Q8N1G1 1221 aaKnown RBP22.68■■□□□ 1.22
USH1G-201ENST00000579243 BICD2Q8TD16 824 aa22.68■■□□□ 1.22
USH1G-201ENST00000579243 CDHR1Q96JP9 859 aa22.68■■□□□ 1.22
USH1G-201ENST00000579243 USP28Q96RU2 1077 aa22.68■■□□□ 1.22
USH1G-201ENST00000579243 MAFGO15525 162 aa22.68■■□□□ 1.22
USH1G-201ENST00000579243 MMP1P03956 469 aa22.68■■□□□ 1.22
USH1G-201ENST00000579243 ZNF445P59923 1031 aa22.68■■□□□ 1.22
USH1G-201ENST00000579243 KAT2BQ92831 832 aa22.68■■□□□ 1.22
USH1G-201ENST00000579243 MXRA8Q9BRK3 442 aa22.68■■□□□ 1.22
USH1G-201ENST00000579243 MYH7BA7E2Y1 1941 aa22.67■■□□□ 1.22
USH1G-201ENST00000579243 FSD2A1L4K1 749 aa22.67■■□□□ 1.22
USH1G-201ENST00000579243 TLR3O15455 904 aaKnown RBP22.67■■□□□ 1.22
USH1G-201ENST00000579243 ATP9AO75110 1047 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms