RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 ATP6V0A1Q93050 837 aa10.6□□□□□ -0.71
CDK5RAP3-211ENST00000578996 INPP4AQ96PE3 977 aaPredicted RBP10.6□□□□□ -0.71
CDK5RAP3-211ENST00000578996 C16orf70Q9BSU1 422 aa10.6□□□□□ -0.71
CDK5RAP3-211ENST00000578996 MTA3Q9BTC8 594 aa10.6□□□□□ -0.71
CDK5RAP3-211ENST00000578996 TUT1Q9H6E5 874 aaKnown RBP10.6□□□□□ -0.71
CDK5RAP3-211ENST00000578996 PSTPIP2Q9H939 334 aa10.6□□□□□ -0.71
CDK5RAP3-211ENST00000578996 PKD2L1Q9P0L9 805 aa10.6□□□□□ -0.71
CDK5RAP3-211ENST00000578996 PRUNE2Q8WUY3 3088 aa10.6□□□□□ -0.71
CDK5RAP3-211ENST00000578996 FRMPD4Q14CM0 1322 aa10.59□□□□□ -0.71
CDK5RAP3-211ENST00000578996 SPATA31C2B4DYI2 1134 aa10.59□□□□□ -0.71
CDK5RAP3-211ENST00000578996 GTPBP6O43824 516 aaPredicted RBP10.59□□□□□ -0.71
CDK5RAP3-211ENST00000578996 ARHGEF15O94989 841 aa10.59□□□□□ -0.71
CDK5RAP3-211ENST00000578996 CTSHP09668 335 aa10.59□□□□□ -0.71
CDK5RAP3-211ENST00000578996 SMIM10L2AP0DMW4 78 aa10.59□□□□□ -0.71
CDK5RAP3-211ENST00000578996 SMIM10L2BP0DMW5 78 aa10.59□□□□□ -0.71
CDK5RAP3-211ENST00000578996 SMARCA1P28370 1054 aa10.59□□□□□ -0.71
CDK5RAP3-211ENST00000578996 ICAM3P32942 547 aa10.59□□□□□ -0.71
CDK5RAP3-211ENST00000578996 LIFRP42702 1097 aa10.59□□□□□ -0.71
CDK5RAP3-211ENST00000578996 TAP1Q03518 808 aa10.59□□□□□ -0.71
CDK5RAP3-211ENST00000578996 RBL2Q08999 1139 aa10.59□□□□□ -0.71
CDK5RAP3-211ENST00000578996 SEMA3FQ13275 785 aa10.59□□□□□ -0.71
CDK5RAP3-211ENST00000578996 IKBKEQ14164 716 aa10.59□□□□□ -0.71
CDK5RAP3-211ENST00000578996 GPNMBQ14956 572 aa10.59□□□□□ -0.71
CDK5RAP3-211ENST00000578996 TMTC3Q6ZXV5 915 aa10.59□□□□□ -0.71
CDK5RAP3-211ENST00000578996 TCEANC2Q96MN5 208 aa10.59□□□□□ -0.71
CDK5RAP3-211ENST00000578996 NEK1Q96PY6 1258 aa10.59□□□□□ -0.71
CDK5RAP3-211ENST00000578996 USP26Q9BXU7 913 aa10.59□□□□□ -0.71
CDK5RAP3-211ENST00000578996 TSPYL2Q9H2G4 693 aaPredicted RBP10.59□□□□□ -0.71
CDK5RAP3-211ENST00000578996 ZNF215Q9UL58 517 aaPredicted RBP10.59□□□□□ -0.71
CDK5RAP3-211ENST00000578996 MTUS1Q9ULD2 1270 aa10.59□□□□□ -0.71
CDK5RAP3-211ENST00000578996 NAP1L2Q9ULW6 460 aaPredicted RBP10.59□□□□□ -0.71
CDK5RAP3-211ENST00000578996 SPTBN5Q9NRC6 3674 aaKnown RBP10.59□□□□□ -0.71
CDK5RAP3-211ENST00000578996 LCHNA4D1U4 455 aa10.58□□□□□ -0.72
CDK5RAP3-211ENST00000578996 EPOPA6NHQ4 379 aa10.58□□□□□ -0.72
CDK5RAP3-211ENST00000578996 SPDYE3A6NKU9 549 aa10.58□□□□□ -0.72
CDK5RAP3-211ENST00000578996 RSPH10B2B2RC85 870 aa10.58□□□□□ -0.72
CDK5RAP3-211ENST00000578996 PIK3CDO00329 1044 aa10.58□□□□□ -0.72
CDK5RAP3-211ENST00000578996 TREHO43280 583 aa10.58□□□□□ -0.72
CDK5RAP3-211ENST00000578996 LGR5O75473 907 aa10.58□□□□□ -0.72
CDK5RAP3-211ENST00000578996 CXCL10P02778 98 aa10.58□□□□□ -0.72
CDK5RAP3-211ENST00000578996 RSPH10BP0C881 870 aa10.58□□□□□ -0.72
CDK5RAP3-211ENST00000578996 ARHGAP4P98171 946 aa10.58□□□□□ -0.72
CDK5RAP3-211ENST00000578996 TCTN1Q2MV58 587 aa10.58□□□□□ -0.72
CDK5RAP3-211ENST00000578996 TRIM71Q2Q1W2 868 aaKnown RBP10.58□□□□□ -0.72
CDK5RAP3-211ENST00000578996 BMP2KLQ5H9B9 411 aa10.58□□□□□ -0.72
CDK5RAP3-211ENST00000578996 SERINC5Q86VE9 423 aa10.58□□□□□ -0.72
CDK5RAP3-211ENST00000578996 FANCBQ8NB91 859 aa10.58□□□□□ -0.72
CDK5RAP3-211ENST00000578996 GPR20Q99678 358 aa10.58□□□□□ -0.72
CDK5RAP3-211ENST00000578996 RNPEPQ9H4A4 650 aa10.58□□□□□ -0.72
CDK5RAP3-211ENST00000578996 SETD4Q9NVD3 440 aa10.58□□□□□ -0.72
CDK5RAP3-211ENST00000578996 TELO2Q9Y4R8 837 aa10.58□□□□□ -0.72
CDK5RAP3-211ENST00000578996 MYH7BA7E2Y1 1941 aa10.58□□□□□ -0.72
CDK5RAP3-211ENST00000578996 CHD9Q3L8U1 2897 aa10.58□□□□□ -0.72
CDK5RAP3-211ENST00000578996 EMSYQ7Z589 1322 aa10.58□□□□□ -0.72
CDK5RAP3-211ENST00000578996 BAZ2BQ9UIF8 2168 aaKnown RBP10.58□□□□□ -0.72
CDK5RAP3-211ENST00000578996 ABHD14A-ACY1A0A1B0GW23 586 aa10.57□□□□□ -0.72
CDK5RAP3-211ENST00000578996 GNAT1P11488 350 aa10.57□□□□□ -0.72
CDK5RAP3-211ENST00000578996 MARK3P27448 753 aa10.57□□□□□ -0.72
CDK5RAP3-211ENST00000578996 TCF7P36402 384 aaPredicted RBP10.57□□□□□ -0.72
CDK5RAP3-211ENST00000578996 NAPAP54920 295 aa10.57□□□□□ -0.72
CDK5RAP3-211ENST00000578996 FGD1P98174 961 aa10.57□□□□□ -0.72
CDK5RAP3-211ENST00000578996 MTMR1Q13613 665 aa10.57□□□□□ -0.72
CDK5RAP3-211ENST00000578996 MBTPS1Q14703 1052 aa10.57□□□□□ -0.72
CDK5RAP3-211ENST00000578996 KRT40Q6A162 431 aa10.57□□□□□ -0.72
CDK5RAP3-211ENST00000578996 XRRA1Q6P2D8 792 aa10.57□□□□□ -0.72
CDK5RAP3-211ENST00000578996 TRAF7Q6Q0C0 670 aa10.57□□□□□ -0.72
CDK5RAP3-211ENST00000578996 APOA5Q6Q788 366 aa10.57□□□□□ -0.72
CDK5RAP3-211ENST00000578996 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.57□□□□□ -0.72
CDK5RAP3-211ENST00000578996 SPRED2Q7Z698 418 aa10.57□□□□□ -0.72
CDK5RAP3-211ENST00000578996 MYOCDQ8IZQ8 938 aa10.57□□□□□ -0.72
CDK5RAP3-211ENST00000578996 GIMAP8Q8ND71 665 aaPredicted RBP10.57□□□□□ -0.72
CDK5RAP3-211ENST00000578996 DBF4BQ8NFT6 615 aa10.57□□□□□ -0.72
CDK5RAP3-211ENST00000578996 ATXN2LQ8WWM7 1075 aaKnown RBP10.57□□□□□ -0.72
CDK5RAP3-211ENST00000578996 GPRASP2Q96D09 838 aa10.57□□□□□ -0.72
CDK5RAP3-211ENST00000578996 EHMT1Q9H9B1 1298 aa10.57□□□□□ -0.72
CDK5RAP3-211ENST00000578996 RBM28Q9NW13 759 aaKnown RBP10.57□□□□□ -0.72
CDK5RAP3-211ENST00000578996 PCDHA6Q9UN73 950 aa10.57□□□□□ -0.72
CDK5RAP3-211ENST00000578996 PCDHA8Q9Y5H6 950 aa10.57□□□□□ -0.72
CDK5RAP3-211ENST00000578996 GOLGA8AA7E2F4 631 aa10.56□□□□□ -0.72
CDK5RAP3-211ENST00000578996 GOLGA8BA8MQT2 603 aa10.56□□□□□ -0.72
CDK5RAP3-211ENST00000578996 ZBTB43O43298 467 aa10.56□□□□□ -0.72
CDK5RAP3-211ENST00000578996 EFCAB14O75071 495 aa10.56□□□□□ -0.72
CDK5RAP3-211ENST00000578996 ATP9AO75110 1047 aa10.56□□□□□ -0.72
CDK5RAP3-211ENST00000578996 CDC45O75419 566 aa10.56□□□□□ -0.72
CDK5RAP3-211ENST00000578996 GJB5O95377 273 aa10.56□□□□□ -0.72
CDK5RAP3-211ENST00000578996 AMHP03971 560 aa10.56□□□□□ -0.72
CDK5RAP3-211ENST00000578996 MRPS5P82675 430 aaKnown RBP10.56□□□□□ -0.72
CDK5RAP3-211ENST00000578996 RTN1Q16799 776 aa10.56□□□□□ -0.72
CDK5RAP3-211ENST00000578996 ADCK5Q3MIX3 580 aa10.56□□□□□ -0.72
CDK5RAP3-211ENST00000578996 WWC2Q6AWC2 1192 aa10.56□□□□□ -0.72
CDK5RAP3-211ENST00000578996 SGMS1Q86VZ5 419 aa10.56□□□□□ -0.72
CDK5RAP3-211ENST00000578996 GDPD5Q8WTR4 605 aa10.56□□□□□ -0.72
CDK5RAP3-211ENST00000578996 CDHR1Q96JP9 859 aa10.56□□□□□ -0.72
CDK5RAP3-211ENST00000578996 PGBD1Q96JS3 809 aa10.56□□□□□ -0.72
CDK5RAP3-211ENST00000578996 ASB2Q96Q27 587 aa10.56□□□□□ -0.72
CDK5RAP3-211ENST00000578996 RAD9AQ99638 391 aa10.56□□□□□ -0.72
CDK5RAP3-211ENST00000578996 SENP7Q9BQF6 1050 aa10.56□□□□□ -0.72
CDK5RAP3-211ENST00000578996 MTCH2Q9Y6C9 303 aa10.56□□□□□ -0.72
CDK5RAP3-211ENST00000578996 CNTNAP5Q8WYK1 1306 aa10.56□□□□□ -0.72
CDK5RAP3-211ENST00000578996 TRIP12Q14669 1992 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms