RNA–Protein interactions for RNA: ENST00000578987.1

NUP85-209, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-209ENST00000578987 CNKSR3Q6P9H4 555 aa4.46□□□□□ -1.7
NUP85-209ENST00000578987 TRAF7Q6Q0C0 670 aa4.46□□□□□ -1.7
NUP85-209ENST00000578987 EP400NLQ6ZTU2 488 aa4.46□□□□□ -1.7
NUP85-209ENST00000578987 STOX1Q6ZVD7 989 aa4.46□□□□□ -1.7
NUP85-209ENST00000578987 CYFIP1Q7L576 1253 aa4.46□□□□□ -1.7
NUP85-209ENST00000578987 VSIG10LQ86VR7 867 aa4.46□□□□□ -1.7
NUP85-209ENST00000578987 RAB11FIP4Q86YS3 637 aa4.46□□□□□ -1.7
NUP85-209ENST00000578987 CMTR1Q8N1G2 835 aaKnown RBP4.46□□□□□ -1.7
NUP85-209ENST00000578987 CCDC155Q8N6L0 562 aa4.46□□□□□ -1.7
NUP85-209ENST00000578987 SP7Q8TDD2 431 aaPredicted RBP4.46□□□□□ -1.7
NUP85-209ENST00000578987 AFAP1L1Q8TED9 768 aa4.46□□□□□ -1.7
NUP85-209ENST00000578987 HLA-CQ95604 372 aa4.46□□□□□ -1.7
NUP85-209ENST00000578987 MTMR8Q96EF0 704 aa4.46□□□□□ -1.7
NUP85-209ENST00000578987 RAD9AQ99638 391 aa4.46□□□□□ -1.7
NUP85-209ENST00000578987 C17orf80Q9BSJ5 609 aa4.46□□□□□ -1.7
NUP85-209ENST00000578987 C16orf70Q9BSU1 422 aa4.46□□□□□ -1.7
NUP85-209ENST00000578987 MYL10Q9BUA6 226 aa4.46□□□□□ -1.7
NUP85-209ENST00000578987 DSCC1Q9BVC3 393 aa4.46□□□□□ -1.7
NUP85-209ENST00000578987 KRT23Q9C075 422 aa4.46□□□□□ -1.7
NUP85-209ENST00000578987 RNPEPQ9H4A4 650 aa4.46□□□□□ -1.7
NUP85-209ENST00000578987 RIOX1Q9H6W3 641 aa4.46□□□□□ -1.7
NUP85-209ENST00000578987 MLXIPQ9HAP2 919 aa4.46□□□□□ -1.7
NUP85-209ENST00000578987 SETD4Q9NVD3 440 aa4.46□□□□□ -1.7
NUP85-209ENST00000578987 CTNNA3Q9UI47 895 aa4.46□□□□□ -1.7
NUP85-209ENST00000578987 PNMA2Q9UL42 364 aa4.46□□□□□ -1.7
NUP85-209ENST00000578987 PCDHA1Q9Y5I3 950 aa4.46□□□□□ -1.7
NUP85-209ENST00000578987 STK24Q9Y6E0 443 aa4.46□□□□□ -1.7
NUP85-209ENST00000578987 BRWD1Q9NSI6 2320 aa4.46□□□□□ -1.7
NUP85-209ENST00000578987 CHD7Q9P2D1 2997 aa4.46□□□□□ -1.7
NUP85-209ENST00000578987 CHD9Q3L8U1 2897 aa4.46□□□□□ -1.7
NUP85-209ENST00000578987 FNDC1Q4ZHG4 1894 aaPredicted RBP4.45□□□□□ -1.7
NUP85-209ENST00000578987 TTC3P53804 2025 aa4.45□□□□□ -1.7
NUP85-209ENST00000578987 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.45□□□□□ -1.7
NUP85-209ENST00000578987 ABHD14A-ACY1A0A1B0GW23 586 aa4.45□□□□□ -1.7
NUP85-209ENST00000578987 hCG_1642624A0A1W2PR95 340 aa4.45□□□□□ -1.7
NUP85-209ENST00000578987 C17orf102A2RUQ5 167 aa4.45□□□□□ -1.7
NUP85-209ENST00000578987 LINC01553A4QN01 128 aa4.45□□□□□ -1.7
NUP85-209ENST00000578987 RSPH10B2B2RC85 870 aa4.45□□□□□ -1.7
NUP85-209ENST00000578987 E7EWF7 191 aa4.45□□□□□ -1.7
NUP85-209ENST00000578987 H3BRB1 525 aa4.45□□□□□ -1.7
NUP85-209ENST00000578987 GCOM1H8Y6P7 765 aaPredicted RBP4.45□□□□□ -1.7
NUP85-209ENST00000578987 ZBTB5O15062 677 aa4.45□□□□□ -1.7
NUP85-209ENST00000578987 LGR5O75473 907 aa4.45□□□□□ -1.7
NUP85-209ENST00000578987 BAIAP3O94812 1187 aa4.45□□□□□ -1.7
NUP85-209ENST00000578987 CSPG5O95196 566 aa4.45□□□□□ -1.7
NUP85-209ENST00000578987 GJB5O95377 273 aa4.45□□□□□ -1.7
NUP85-209ENST00000578987 CYP21A2P08686 494 aa4.45□□□□□ -1.7
NUP85-209ENST00000578987 CTSHP09668 335 aa4.45□□□□□ -1.7
NUP85-209ENST00000578987 RSPH10BP0C881 870 aa4.45□□□□□ -1.7
NUP85-209ENST00000578987 POLR2MP0CAP2 368 aa4.45□□□□□ -1.7
NUP85-209ENST00000578987 SMIM10L2AP0DMW4 78 aa4.45□□□□□ -1.7
NUP85-209ENST00000578987 SMIM10L2BP0DMW5 78 aa4.45□□□□□ -1.7
NUP85-209ENST00000578987 CHRM1P11229 460 aaPredicted RBP4.45□□□□□ -1.7
NUP85-209ENST00000578987 GSPT1P15170 499 aaKnown RBP4.45□□□□□ -1.7
NUP85-209ENST00000578987 RXRAP19793 462 aa4.45□□□□□ -1.7
NUP85-209ENST00000578987 UBA1P22314 1058 aaKnown RBP4.45□□□□□ -1.7
NUP85-209ENST00000578987 CHMLP26374 656 aa4.45□□□□□ -1.7
NUP85-209ENST00000578987 CCND2P30279 289 aa4.45□□□□□ -1.7
NUP85-209ENST00000578987 ERVK-21P61565 698 aa4.45□□□□□ -1.7
NUP85-209ENST00000578987 SEMA3FQ13275 785 aa4.45□□□□□ -1.7
NUP85-209ENST00000578987 COL9A3Q14050 684 aaPredicted RBP4.45□□□□□ -1.7
NUP85-209ENST00000578987 GRM4Q14833 912 aa4.45□□□□□ -1.7
NUP85-209ENST00000578987 WTAPQ15007 396 aa4.45□□□□□ -1.7
NUP85-209ENST00000578987 ERICH6BQ5W0A0 696 aa4.45□□□□□ -1.7
NUP85-209ENST00000578987 USP17L6PQ6QN14 398 aa4.45□□□□□ -1.7
NUP85-209ENST00000578987 SESTD1Q86VW0 696 aa4.45□□□□□ -1.7
NUP85-209ENST00000578987 MYOCDQ8IZQ8 938 aa4.45□□□□□ -1.7
NUP85-209ENST00000578987 CCDC82Q8N4S0 544 aa4.45□□□□□ -1.7
NUP85-209ENST00000578987 FBXO22Q8NEZ5 403 aa4.45□□□□□ -1.7
NUP85-209ENST00000578987 PPTC7Q8NI37 304 aa4.45□□□□□ -1.7
NUP85-209ENST00000578987 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.45□□□□□ -1.7
NUP85-209ENST00000578987 CAGE1Q8TC20 777 aa4.45□□□□□ -1.7
NUP85-209ENST00000578987 ATP6V0A1Q93050 837 aa4.45□□□□□ -1.7
NUP85-209ENST00000578987 EMID1Q96A84 441 aaPredicted RBP4.45□□□□□ -1.7
NUP85-209ENST00000578987 ZBTB10Q96DT7 871 aa4.45□□□□□ -1.7
NUP85-209ENST00000578987 TGS1Q96RS0 853 aaKnown RBP4.45□□□□□ -1.7
NUP85-209ENST00000578987 LRFN3Q9BTN0 628 aa4.45□□□□□ -1.7
NUP85-209ENST00000578987 KATNAL1Q9BW62 490 aa4.45□□□□□ -1.7
NUP85-209ENST00000578987 KDM4CQ9H3R0 1056 aa4.45□□□□□ -1.7
NUP85-209ENST00000578987 TUT1Q9H6E5 874 aaKnown RBP4.45□□□□□ -1.7
NUP85-209ENST00000578987 CNNM2Q9H8M5 875 aa4.45□□□□□ -1.7
NUP85-209ENST00000578987 PKD2L1Q9P0L9 805 aa4.45□□□□□ -1.7
NUP85-209ENST00000578987 XIRP2A4UGR9 3374 aa4.44□□□□□ -1.7
NUP85-209ENST00000578987 PNMA6FA0A0J9YX94 578 aa4.44□□□□□ -1.7
NUP85-209ENST00000578987 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.44□□□□□ -1.7
NUP85-209ENST00000578987 ERICH2A1L162 156 aa4.44□□□□□ -1.7
NUP85-209ENST00000578987 SPATA31C2B4DYI2 1134 aa4.44□□□□□ -1.7
NUP85-209ENST00000578987 H3BQ06 376 aaPredicted RBP4.44□□□□□ -1.7
NUP85-209ENST00000578987 HIP1O00291 1037 aa4.44□□□□□ -1.7
NUP85-209ENST00000578987 ATP9AO75110 1047 aa4.44□□□□□ -1.7
NUP85-209ENST00000578987 F2P00734 622 aa4.44□□□□□ -1.7
NUP85-209ENST00000578987 CHRNA1P02708 482 aa4.44□□□□□ -1.7
NUP85-209ENST00000578987 AMHP03971 560 aa4.44□□□□□ -1.7
NUP85-209ENST00000578987 LGALS2P05162 132 aa4.44□□□□□ -1.7
NUP85-209ENST00000578987 TGFB3P10600 412 aa4.44□□□□□ -1.7
NUP85-209ENST00000578987 IL9P15248 144 aa4.44□□□□□ -1.7
NUP85-209ENST00000578987 IBSPP21815 317 aaPredicted RBP4.44□□□□□ -1.7
NUP85-209ENST00000578987 KCNA5P22460 613 aa4.44□□□□□ -1.7
NUP85-209ENST00000578987 NUBP1P53384 320 aa4.44□□□□□ -1.7
NUP85-209ENST00000578987 ANTXR2P58335 489 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms