RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 BCAS3Q9H6U6 928 aa7.47□□□□□ -1.21
TRAF4-213ENST00000578917 JADE2Q9NQC1 790 aa7.47□□□□□ -1.21
TRAF4-213ENST00000578917 KCNH7Q9NS40 1196 aa7.47□□□□□ -1.21
TRAF4-213ENST00000578917 ZNF215Q9UL58 517 aaPredicted RBP7.47□□□□□ -1.21
TRAF4-213ENST00000578917 GRIN2DO15399 1336 aa7.47□□□□□ -1.21
TRAF4-213ENST00000578917 ESYT2A0FGR8 921 aa7.46□□□□□ -1.22
TRAF4-213ENST00000578917 MARCH6O60337 910 aa7.46□□□□□ -1.22
TRAF4-213ENST00000578917 ATP9AO75110 1047 aa7.46□□□□□ -1.22
TRAF4-213ENST00000578917 CD4P01730 458 aa7.46□□□□□ -1.22
TRAF4-213ENST00000578917 FGBP02675 491 aa7.46□□□□□ -1.22
TRAF4-213ENST00000578917 GNAT1P11488 350 aa7.46□□□□□ -1.22
TRAF4-213ENST00000578917 CSF2RAP15509 400 aa7.46□□□□□ -1.22
TRAF4-213ENST00000578917 ITGB8P26012 769 aa7.46□□□□□ -1.22
TRAF4-213ENST00000578917 SREBF1P36956 1147 aa7.46□□□□□ -1.22
TRAF4-213ENST00000578917 ARHGAP4P98171 946 aa7.46□□□□□ -1.22
TRAF4-213ENST00000578917 SCRN1Q12765 414 aa7.46□□□□□ -1.22
TRAF4-213ENST00000578917 SHHQ15465 462 aa7.46□□□□□ -1.22
TRAF4-213ENST00000578917 PLA2G4DQ86XP0 818 aa7.46□□□□□ -1.22
TRAF4-213ENST00000578917 CYP2W1Q8TAV3 490 aa7.46□□□□□ -1.22
TRAF4-213ENST00000578917 SEPT1Q8WYJ6 367 aa7.46□□□□□ -1.22
TRAF4-213ENST00000578917 TNPO1Q92973 898 aaKnown RBP7.46□□□□□ -1.22
TRAF4-213ENST00000578917 RNPC3Q96LT9 517 aaKnown RBP7.46□□□□□ -1.22
TRAF4-213ENST00000578917 UIMC1Q96RL1 719 aa7.46□□□□□ -1.22
TRAF4-213ENST00000578917 GPR20Q99678 358 aa7.46□□□□□ -1.22
TRAF4-213ENST00000578917 BRMS1Q9HCU9 246 aa7.46□□□□□ -1.22
TRAF4-213ENST00000578917 JPH1Q9HDC5 661 aaPredicted RBP7.46□□□□□ -1.22
TRAF4-213ENST00000578917 ORC3Q9UBD5 711 aaPredicted RBP7.46□□□□□ -1.22
TRAF4-213ENST00000578917 HDAC6Q9UBN7 1215 aa7.46□□□□□ -1.22
TRAF4-213ENST00000578917 SLC9A2Q9UBY0 812 aa7.46□□□□□ -1.22
TRAF4-213ENST00000578917 TBX21Q9UL17 535 aa7.46□□□□□ -1.22
TRAF4-213ENST00000578917 PCDHA4Q9UN74 947 aa7.46□□□□□ -1.22
TRAF4-213ENST00000578917 LIMCH1Q9UPQ0 1083 aa7.46□□□□□ -1.22
TRAF4-213ENST00000578917 UBIAD1Q9Y5Z9 338 aa7.46□□□□□ -1.22
TRAF4-213ENST00000578917 FRMPD4Q14CM0 1322 aa7.46□□□□□ -1.22
TRAF4-213ENST00000578917 CCDC194A0A1B0GVG4 234 aa7.45□□□□□ -1.22
TRAF4-213ENST00000578917 C17orf102A2RUQ5 167 aa7.45□□□□□ -1.22
TRAF4-213ENST00000578917 DDX39AO00148 427 aaKnown RBP7.45□□□□□ -1.22
TRAF4-213ENST00000578917 MEIS1O00470 390 aa7.45□□□□□ -1.22
TRAF4-213ENST00000578917 BACH1O14867 736 aa7.45□□□□□ -1.22
TRAF4-213ENST00000578917 DTNBO60941 627 aa7.45□□□□□ -1.22
TRAF4-213ENST00000578917 F2P00734 622 aa7.45□□□□□ -1.22
TRAF4-213ENST00000578917 LGALS2P05162 132 aa7.45□□□□□ -1.22
TRAF4-213ENST00000578917 ARP10275 920 aa7.45□□□□□ -1.22
TRAF4-213ENST00000578917 ACRP10323 421 aa7.45□□□□□ -1.22
TRAF4-213ENST00000578917 TCF7P36402 384 aaPredicted RBP7.45□□□□□ -1.22
TRAF4-213ENST00000578917 C8orf34Q49A92 452 aa7.45□□□□□ -1.22
TRAF4-213ENST00000578917 PRR16Q569H4 304 aa7.45□□□□□ -1.22
TRAF4-213ENST00000578917 GALNT17Q6IS24 598 aa7.45□□□□□ -1.22
TRAF4-213ENST00000578917 GDF6Q6KF10 455 aaPredicted RBP7.45□□□□□ -1.22
TRAF4-213ENST00000578917 DEFB128Q7Z7B8 93 aa7.45□□□□□ -1.22
TRAF4-213ENST00000578917 CKAP2LQ8IYA6 745 aa7.45□□□□□ -1.22
TRAF4-213ENST00000578917 BLIDQ8IZY5 108 aa7.45□□□□□ -1.22
TRAF4-213ENST00000578917 RASGRP4Q8TDF6 673 aa7.45□□□□□ -1.22
TRAF4-213ENST00000578917 KAT2BQ92831 832 aa7.45□□□□□ -1.22
TRAF4-213ENST00000578917 ATP6V0A1Q93050 837 aa7.45□□□□□ -1.22
TRAF4-213ENST00000578917 ZNF577Q9BSK1 485 aa7.45□□□□□ -1.22
TRAF4-213ENST00000578917 NOC4LQ9BVI4 516 aaKnown RBP7.45□□□□□ -1.22
TRAF4-213ENST00000578917 MTIF3Q9H2K0 278 aaKnown RBP7.45□□□□□ -1.22
TRAF4-213ENST00000578917 PRO3102Q9H379 93 aa7.45□□□□□ -1.22
TRAF4-213ENST00000578917 SMARCAD1Q9H4L7 1026 aa7.45□□□□□ -1.22
TRAF4-213ENST00000578917 KCNJ14Q9UNX9 436 aa7.45□□□□□ -1.22
TRAF4-213ENST00000578917 SAMM50Q9Y512 469 aa7.45□□□□□ -1.22
TRAF4-213ENST00000578917 PLXNA1Q9UIW2 1896 aa7.45□□□□□ -1.22
TRAF4-213ENST00000578917 ZBBXA8MT70 800 aa7.44□□□□□ -1.22
TRAF4-213ENST00000578917 FAM86B1E9PN63 330 aa7.44□□□□□ -1.22
TRAF4-213ENST00000578917 IPO5O00410 1097 aaKnown RBP7.44□□□□□ -1.22
TRAF4-213ENST00000578917 ST18O60284 1047 aa7.44□□□□□ -1.22
TRAF4-213ENST00000578917 CYP3A4P08684 503 aa7.44□□□□□ -1.22
TRAF4-213ENST00000578917 FAM86B2P0C5J1 330 aa7.44□□□□□ -1.22
TRAF4-213ENST00000578917 SMIM10L2AP0DMW4 78 aa7.44□□□□□ -1.22
TRAF4-213ENST00000578917 SMIM10L2BP0DMW5 78 aa7.44□□□□□ -1.22
TRAF4-213ENST00000578917 ACTN1P12814 892 aa7.44□□□□□ -1.22
TRAF4-213ENST00000578917 KCNA2P16389 499 aa7.44□□□□□ -1.22
TRAF4-213ENST00000578917 MARK3P27448 753 aa7.44□□□□□ -1.22
TRAF4-213ENST00000578917 THPOP40225 353 aa7.44□□□□□ -1.22
TRAF4-213ENST00000578917 CLK2P49760 499 aaKnown RBP7.44□□□□□ -1.22
TRAF4-213ENST00000578917 FXR1P51114 621 aaKnown RBP eCLIP7.44□□□□□ -1.22
TRAF4-213ENST00000578917 USP11P51784 963 aa7.44□□□□□ -1.22
TRAF4-213ENST00000578917 FOSBP53539 338 aa7.44□□□□□ -1.22
TRAF4-213ENST00000578917 EPHB4P54760 987 aa7.44□□□□□ -1.22
TRAF4-213ENST00000578917 ACTR2P61160 394 aa7.44□□□□□ -1.22
TRAF4-213ENST00000578917 IGBP1P78318 339 aa7.44□□□□□ -1.22
TRAF4-213ENST00000578917 SEMA3FQ13275 785 aa7.44□□□□□ -1.22
TRAF4-213ENST00000578917 PTK7Q13308 1070 aa7.44□□□□□ -1.22
TRAF4-213ENST00000578917 GNL2Q13823 731 aaKnown RBP7.44□□□□□ -1.22
TRAF4-213ENST00000578917 NONOQ15233 471 aaKnown RBP eCLIP7.44□□□□□ -1.22
TRAF4-213ENST00000578917 SAFBQ15424 915 aaKnown RBP eCLIP7.44□□□□□ -1.22
TRAF4-213ENST00000578917 ME3Q16798 604 aa7.44□□□□□ -1.22
TRAF4-213ENST00000578917 LRIT3Q3SXY7 679 aa7.44□□□□□ -1.22
TRAF4-213ENST00000578917 C9orf50Q5SZB4 431 aa7.44□□□□□ -1.22
TRAF4-213ENST00000578917 FAM160B1Q5W0V3 765 aa7.44□□□□□ -1.22
TRAF4-213ENST00000578917 MIS18BP1Q6P0N0 1132 aa7.44□□□□□ -1.22
TRAF4-213ENST00000578917 PSRC1Q6PGN9 363 aaPredicted RBP7.44□□□□□ -1.22
TRAF4-213ENST00000578917 ZNF365Q70YC5 407 aa7.44□□□□□ -1.22
TRAF4-213ENST00000578917 NIPA1Q7RTP0 329 aa7.44□□□□□ -1.22
TRAF4-213ENST00000578917 OTOP2Q7RTS6 562 aa7.44□□□□□ -1.22
TRAF4-213ENST00000578917 TRMT1LQ7Z2T5 733 aaKnown RBP7.44□□□□□ -1.22
TRAF4-213ENST00000578917 KRT25Q7Z3Z0 450 aa7.44□□□□□ -1.22
TRAF4-213ENST00000578917 TRIM50Q86XT4 487 aa7.44□□□□□ -1.22
TRAF4-213ENST00000578917 FAM177A1Q8N128 213 aaPredicted RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms