RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 NPY5RQ15761 445 aa16.5■□□□□ 0.23
MKS1-207ENST00000578789 NBPF20Q3BBV1 942 aa16.5■□□□□ 0.23
MKS1-207ENST00000578789 CEP55Q53EZ4 464 aa16.5■□□□□ 0.23
MKS1-207ENST00000578789 GALNT17Q6IS24 598 aa16.5■□□□□ 0.23
MKS1-207ENST00000578789 CYFIP1Q7L576 1253 aa16.5■□□□□ 0.23
MKS1-207ENST00000578789 NIPA1Q7RTP0 329 aa16.5■□□□□ 0.23
MKS1-207ENST00000578789 SESTD1Q86VW0 696 aa16.5■□□□□ 0.23
MKS1-207ENST00000578789 NECAB1Q8N987 351 aa16.5■□□□□ 0.23
MKS1-207ENST00000578789 NSUN7Q8NE18 718 aaKnown RBP16.5■□□□□ 0.23
MKS1-207ENST00000578789 LBHD1Q9BQE6 289 aaPredicted RBP16.5■□□□□ 0.23
MKS1-207ENST00000578789 KATNAL1Q9BW62 490 aa16.5■□□□□ 0.23
MKS1-207ENST00000578789 UPF2Q9HAU5 1272 aaKnown RBP16.5■□□□□ 0.23
MKS1-207ENST00000578789 PCDHA4Q9UN74 947 aa16.5■□□□□ 0.23
MKS1-207ENST00000578789 LIMCH1Q9UPQ0 1083 aa16.5■□□□□ 0.23
MKS1-207ENST00000578789 MEIS1O00470 390 aa16.49■□□□□ 0.23
MKS1-207ENST00000578789 ATP9AO75110 1047 aa16.49■□□□□ 0.23
MKS1-207ENST00000578789 ZNF286BP0CG31 522 aa16.49■□□□□ 0.23
MKS1-207ENST00000578789 ITGB8P26012 769 aa16.49■□□□□ 0.23
MKS1-207ENST00000578789 MDM2Q00987 491 aaPredicted RBP16.49■□□□□ 0.23
MKS1-207ENST00000578789 RABEP1Q15276 862 aa16.49■□□□□ 0.23
MKS1-207ENST00000578789 HABP4Q5JVS0 413 aaKnown RBP16.49■□□□□ 0.23
MKS1-207ENST00000578789 IL27Q8NEV9 243 aa16.49■□□□□ 0.23
MKS1-207ENST00000578789 CYP2W1Q8TAV3 490 aa16.49■□□□□ 0.23
MKS1-207ENST00000578789 RASGRP4Q8TDF6 673 aa16.49■□□□□ 0.23
MKS1-207ENST00000578789 GPR20Q99678 358 aa16.49■□□□□ 0.23
MKS1-207ENST00000578789 KCNH7Q9NS40 1196 aa16.49■□□□□ 0.23
MKS1-207ENST00000578789 ORC3Q9UBD5 711 aaPredicted RBP16.49■□□□□ 0.23
MKS1-207ENST00000578789 NOP56O00567 594 aaKnown RBP16.48■□□□□ 0.23
MKS1-207ENST00000578789 TIMP1P01033 207 aa16.48■□□□□ 0.23
MKS1-207ENST00000578789 LGALS2P05162 132 aa16.48■□□□□ 0.23
MKS1-207ENST00000578789 FDPSP14324 419 aaKnown RBP16.48■□□□□ 0.23
MKS1-207ENST00000578789 CIITAP33076 1130 aa16.48■□□□□ 0.23
MKS1-207ENST00000578789 PSEN2P49810 448 aa16.48■□□□□ 0.23
MKS1-207ENST00000578789 MFSD10Q14728 455 aa16.48■□□□□ 0.23
MKS1-207ENST00000578789 BLIDQ8IZY5 108 aa16.48■□□□□ 0.23
MKS1-207ENST00000578789 WASF1Q92558 559 aa16.48■□□□□ 0.23
MKS1-207ENST00000578789 BADQ92934 168 aa16.48■□□□□ 0.23
MKS1-207ENST00000578789 TBC1D32Q96NH3 1257 aa16.48■□□□□ 0.23
MKS1-207ENST00000578789 C16orf70Q9BSU1 422 aa16.48■□□□□ 0.23
MKS1-207ENST00000578789 PHF20Q9BVI0 1012 aa16.48■□□□□ 0.23
MKS1-207ENST00000578789 TRPV6Q9H1D0 765 aa16.48■□□□□ 0.23
MKS1-207ENST00000578789 TANC1Q9C0D5 1861 aa16.48■□□□□ 0.23
MKS1-207ENST00000578789 NFASCO94856 1347 aa16.47■□□□□ 0.23
MKS1-207ENST00000578789 IGLV3-22A0A075B6J6 115 aa16.47■□□□□ 0.23
MKS1-207ENST00000578789 FAM86B1E9PN63 330 aa16.47■□□□□ 0.23
MKS1-207ENST00000578789 FAM86B2P0C5J1 330 aa16.47■□□□□ 0.23
MKS1-207ENST00000578789 SUPT20HL2P0C7V6 817 aa16.47■□□□□ 0.23
MKS1-207ENST00000578789 ARP10275 920 aa16.47■□□□□ 0.23
MKS1-207ENST00000578789 RAG1P15918 1043 aa16.47■□□□□ 0.23
MKS1-207ENST00000578789 XBP1P17861 261 aa16.47■□□□□ 0.23
MKS1-207ENST00000578789 ZSCAN31Q96LW9 406 aaPredicted RBP16.47■□□□□ 0.23
MKS1-207ENST00000578789 UBE2OQ9C0C9 1292 aaKnown RBP16.47■□□□□ 0.23
MKS1-207ENST00000578789 AGO4Q9HCK5 861 aaKnown RBP16.47■□□□□ 0.23
MKS1-207ENST00000578789 TRMT13Q9NUP7 481 aaKnown RBP16.47■□□□□ 0.23
MKS1-207ENST00000578789 TELO2Q9Y4R8 837 aa16.47■□□□□ 0.23
MKS1-207ENST00000578789 SETQ01105 290 aaPredicted RBP16.46■□□□□ 0.23
MKS1-207ENST00000578789 KIAA0753Q2KHM9 967 aa16.46■□□□□ 0.23
MKS1-207ENST00000578789 FAM47CQ5HY64 1035 aa16.46■□□□□ 0.23
MKS1-207ENST00000578789 ALG1Q9BT22 464 aa16.46■□□□□ 0.23
MKS1-207ENST00000578789 NOC4LQ9BVI4 516 aaKnown RBP16.46■□□□□ 0.23
MKS1-207ENST00000578789 JPH1Q9HDC5 661 aaPredicted RBP16.46■□□□□ 0.23
MKS1-207ENST00000578789 SH2B1Q9NRF2 756 aaPredicted RBP16.46■□□□□ 0.23
MKS1-207ENST00000578789 GTF2IRD1Q9UHL9 959 aa16.46■□□□□ 0.23
MKS1-207ENST00000578789 KCNJ14Q9UNX9 436 aa16.46■□□□□ 0.23
MKS1-207ENST00000578789 TRIOBPQ9H2D6 2365 aa16.46■□□□□ 0.23
MKS1-207ENST00000578789 EDIL3O43854 480 aa16.45■□□□□ 0.22
MKS1-207ENST00000578789 JAK2O60674 1132 aa16.45■□□□□ 0.22
MKS1-207ENST00000578789 DTNBO60941 627 aa16.45■□□□□ 0.22
MKS1-207ENST00000578789 ZNF76P36508 570 aa16.45■□□□□ 0.22
MKS1-207ENST00000578789 USP11P51784 963 aa16.45■□□□□ 0.22
MKS1-207ENST00000578789 ITGB3BPQ13352 177 aaPredicted RBP16.45■□□□□ 0.22
MKS1-207ENST00000578789 MFSD5Q6N075 450 aa16.45■□□□□ 0.22
MKS1-207ENST00000578789 PLA2G4DQ86XP0 818 aa16.45■□□□□ 0.22
MKS1-207ENST00000578789 TDHQ8IZJ6 230 aa16.45■□□□□ 0.22
MKS1-207ENST00000578789 PPP1R13LQ8WUF5 828 aa16.45■□□□□ 0.22
MKS1-207ENST00000578789 SEPT1Q8WYJ6 367 aa16.45■□□□□ 0.22
MKS1-207ENST00000578789 CTAGE1Q96RT6 745 aa16.45■□□□□ 0.22
MKS1-207ENST00000578789 LLPHQ9BRT6 129 aaKnown RBP16.45■□□□□ 0.22
MKS1-207ENST00000578789 HIPK3Q9H422 1215 aa16.45■□□□□ 0.22
MKS1-207ENST00000578789 PKD2L1Q9P0L9 805 aa16.45■□□□□ 0.22
MKS1-207ENST00000578789 HDAC6Q9UBN7 1215 aa16.45■□□□□ 0.22
MKS1-207ENST00000578789 GSTTP1A0A1W2PQM5 241 aa16.44■□□□□ 0.22
MKS1-207ENST00000578789 H3BRB1 525 aa16.44■□□□□ 0.22
MKS1-207ENST00000578789 HOXC8P31273 242 aa16.44■□□□□ 0.22
MKS1-207ENST00000578789 TCF7P36402 384 aaPredicted RBP16.44■□□□□ 0.22
MKS1-207ENST00000578789 SP4Q02446 784 aa16.44■□□□□ 0.22
MKS1-207ENST00000578789 FPGSQ05932 587 aa16.44■□□□□ 0.22
MKS1-207ENST00000578789 GDF6Q6KF10 455 aaPredicted RBP16.44■□□□□ 0.22
MKS1-207ENST00000578789 KRT25Q7Z3Z0 450 aa16.44■□□□□ 0.22
MKS1-207ENST00000578789 CCDC83Q8IWF9 413 aa16.44■□□□□ 0.22
MKS1-207ENST00000578789 C7orf31Q8N865 590 aa16.44■□□□□ 0.22
MKS1-207ENST00000578789 TBCKQ8TEA7 893 aa16.44■□□□□ 0.22
MKS1-207ENST00000578789 LENG9Q96B70 501 aa16.44■□□□□ 0.22
MKS1-207ENST00000578789 SDF4Q9BRK5 362 aa16.44■□□□□ 0.22
MKS1-207ENST00000578789 BACH2Q9BYV9 841 aa16.44■□□□□ 0.22
MKS1-207ENST00000578789 PPP1R12CQ9BZL4 782 aa16.44■□□□□ 0.22
MKS1-207ENST00000578789 TUT1Q9H6E5 874 aaKnown RBP16.44■□□□□ 0.22
MKS1-207ENST00000578789 GJB4Q9NTQ9 266 aa16.44■□□□□ 0.22
MKS1-207ENST00000578789 SLC9A2Q9UBY0 812 aa16.44■□□□□ 0.22
MKS1-207ENST00000578789 ZNF215Q9UL58 517 aaPredicted RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms