RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 HMGB1P09429 215 aaKnown RBP18.24■□□□□ 0.51
CRLF3-203ENST00000578692 UBE2SQ16763 222 aa18.24■□□□□ 0.51
CRLF3-203ENST00000578692 TRIM71Q2Q1W2 868 aaKnown RBP18.24■□□□□ 0.51
CRLF3-203ENST00000578692 ZNF618Q5T7W0 954 aa18.24■□□□□ 0.51
CRLF3-203ENST00000578692 PPP2R2DQ66LE6 453 aa18.24■□□□□ 0.51
CRLF3-203ENST00000578692 GIMAP8Q8ND71 665 aaPredicted RBP18.24■□□□□ 0.51
CRLF3-203ENST00000578692 RNPEPQ9H4A4 650 aa18.24■□□□□ 0.51
CRLF3-203ENST00000578692 PCDHA6Q9UN73 950 aa18.24■□□□□ 0.51
CRLF3-203ENST00000578692 PCDHA8Q9Y5H6 950 aa18.24■□□□□ 0.51
CRLF3-203ENST00000578692 TET1Q8NFU7 2136 aa18.24■□□□□ 0.51
CRLF3-203ENST00000578692 C17orf102A2RUQ5 167 aa18.23■□□□□ 0.51
CRLF3-203ENST00000578692 KIF28PB7ZC32 967 aa18.23■□□□□ 0.51
CRLF3-203ENST00000578692 NBNO60934 754 aa18.23■□□□□ 0.51
CRLF3-203ENST00000578692 CXCL10P02778 98 aa18.23■□□□□ 0.51
CRLF3-203ENST00000578692 KCNJ6P48051 423 aa18.23■□□□□ 0.51
CRLF3-203ENST00000578692 RTN1Q16799 776 aa18.23■□□□□ 0.51
CRLF3-203ENST00000578692 CNKSR3Q6P9H4 555 aa18.23■□□□□ 0.51
CRLF3-203ENST00000578692 ATP6V0A1Q93050 837 aa18.23■□□□□ 0.51
CRLF3-203ENST00000578692 WNT8BQ93098 351 aa18.23■□□□□ 0.51
CRLF3-203ENST00000578692 GPRASP2Q96D09 838 aa18.23■□□□□ 0.51
CRLF3-203ENST00000578692 CDHR1Q96JP9 859 aa18.23■□□□□ 0.51
CRLF3-203ENST00000578692 DOCK5Q9H7D0 1870 aa18.23■□□□□ 0.51
CRLF3-203ENST00000578692 ATP9AO75110 1047 aa18.22■□□□□ 0.51
CRLF3-203ENST00000578692 SMIM10L2AP0DMW4 78 aa18.22■□□□□ 0.51
CRLF3-203ENST00000578692 SMIM10L2BP0DMW5 78 aa18.22■□□□□ 0.51
CRLF3-203ENST00000578692 IGFBP4P22692 258 aa18.22■□□□□ 0.51
CRLF3-203ENST00000578692 ADGRE1Q14246 886 aa18.22■□□□□ 0.51
CRLF3-203ENST00000578692 UTP14CQ5TAP6 766 aaKnown RBP18.22■□□□□ 0.51
CRLF3-203ENST00000578692 TRAF7Q6Q0C0 670 aa18.22■□□□□ 0.51
CRLF3-203ENST00000578692 SERINC5Q86VE9 423 aa18.22■□□□□ 0.51
CRLF3-203ENST00000578692 HERC6Q8IVU3 1022 aa18.22■□□□□ 0.51
CRLF3-203ENST00000578692 TELO2Q9Y4R8 837 aa18.22■□□□□ 0.51
CRLF3-203ENST00000578692 V9GY48 417 aaPredicted RBP18.22■□□□□ 0.51
CRLF3-203ENST00000578692 CNTNAP5Q8WYK1 1306 aa18.22■□□□□ 0.51
CRLF3-203ENST00000578692 EYSQ5T1H1 3165 aa18.22■□□□□ 0.51
CRLF3-203ENST00000578692 KLF18A0A0U1RQI7 1052 aa18.21■□□□□ 0.51
CRLF3-203ENST00000578692 GOLGA8AA7E2F4 631 aa18.21■□□□□ 0.51
CRLF3-203ENST00000578692 GOLGA8BA8MQT2 603 aa18.21■□□□□ 0.51
CRLF3-203ENST00000578692 MAFGO15525 162 aa18.21■□□□□ 0.51
CRLF3-203ENST00000578692 CA3P07451 260 aa18.21■□□□□ 0.51
CRLF3-203ENST00000578692 ITGB5P18084 799 aa18.21■□□□□ 0.51
CRLF3-203ENST00000578692 HOXC8P31273 242 aa18.21■□□□□ 0.51
CRLF3-203ENST00000578692 FGD1P98174 961 aa18.21■□□□□ 0.51
CRLF3-203ENST00000578692 SP4Q02446 784 aa18.21■□□□□ 0.51
CRLF3-203ENST00000578692 FUT2Q10981 343 aa18.21■□□□□ 0.51
CRLF3-203ENST00000578692 WWC2Q6AWC2 1192 aa18.21■□□□□ 0.51
CRLF3-203ENST00000578692 USP38Q8NB14 1042 aa18.21■□□□□ 0.51
CRLF3-203ENST00000578692 PPM1EQ8WY54 764 aa18.21■□□□□ 0.51
CRLF3-203ENST00000578692 KCNB2Q92953 911 aa18.21■□□□□ 0.51
CRLF3-203ENST00000578692 COL25A1Q9BXS0 654 aaPredicted RBP18.21■□□□□ 0.51
CRLF3-203ENST00000578692 EHMT1Q9H9B1 1298 aa18.21■□□□□ 0.51
CRLF3-203ENST00000578692 ZNF215Q9UL58 517 aaPredicted RBP18.21■□□□□ 0.51
CRLF3-203ENST00000578692 UBIAD1Q9Y5Z9 338 aa18.21■□□□□ 0.51
CRLF3-203ENST00000578692 ABHD14A-ACY1A0A1B0GW23 586 aa18.2■□□□□ 0.5
CRLF3-203ENST00000578692 RSPH10B2B2RC85 870 aa18.2■□□□□ 0.5
CRLF3-203ENST00000578692 TREHO43280 583 aa18.2■□□□□ 0.5
CRLF3-203ENST00000578692 RSPH10BP0C881 870 aa18.2■□□□□ 0.5
CRLF3-203ENST00000578692 GNAT1P11488 350 aa18.2■□□□□ 0.5
CRLF3-203ENST00000578692 KCNA2P16389 499 aa18.2■□□□□ 0.5
CRLF3-203ENST00000578692 THPOP40225 353 aa18.2■□□□□ 0.5
CRLF3-203ENST00000578692 NAPAP54920 295 aa18.2■□□□□ 0.5
CRLF3-203ENST00000578692 WDR5P61964 334 aaKnown RBP18.2■□□□□ 0.5
CRLF3-203ENST00000578692 IKBKEQ14164 716 aa18.2■□□□□ 0.5
CRLF3-203ENST00000578692 JADE2Q9NQC1 790 aa18.2■□□□□ 0.5
CRLF3-203ENST00000578692 FAM217BQ9NTX9 383 aaPredicted RBP18.2■□□□□ 0.5
CRLF3-203ENST00000578692 SETD4Q9NVD3 440 aa18.2■□□□□ 0.5
CRLF3-203ENST00000578692 NAP1L2Q9ULW6 460 aaPredicted RBP18.2■□□□□ 0.5
CRLF3-203ENST00000578692 UNC80Q8N2C7 3258 aa18.2■□□□□ 0.5
CRLF3-203ENST00000578692 MYO9BQ13459 2157 aa18.19■□□□□ 0.5
CRLF3-203ENST00000578692 CPA1P15085 419 aa18.19■□□□□ 0.5
CRLF3-203ENST00000578692 CDC27P30260 824 aa18.19■□□□□ 0.5
CRLF3-203ENST00000578692 HSPA4P34932 840 aa18.19■□□□□ 0.5
CRLF3-203ENST00000578692 RCAN1P53805 252 aa18.19■□□□□ 0.5
CRLF3-203ENST00000578692 MTMR1Q13613 665 aa18.19■□□□□ 0.5
CRLF3-203ENST00000578692 MBTPS1Q14703 1052 aa18.19■□□□□ 0.5
CRLF3-203ENST00000578692 TCTN1Q2MV58 587 aa18.19■□□□□ 0.5
CRLF3-203ENST00000578692 TYW1BQ6NUM6 668 aa18.19■□□□□ 0.5
CRLF3-203ENST00000578692 TRIM50Q86XT4 487 aa18.19■□□□□ 0.5
CRLF3-203ENST00000578692 TEX2Q8IWB9 1127 aa18.19■□□□□ 0.5
CRLF3-203ENST00000578692 SEPT1Q8WYJ6 367 aa18.19■□□□□ 0.5
CRLF3-203ENST00000578692 RIC8AQ9NPQ8 531 aa18.19■□□□□ 0.5
CRLF3-203ENST00000578692 EMSYQ7Z589 1322 aa18.18■□□□□ 0.5
CRLF3-203ENST00000578692 SMCO2A6NFE2 343 aa18.18■□□□□ 0.5
CRLF3-203ENST00000578692 hCG_1984214I3L0E3 225 aa18.18■□□□□ 0.5
CRLF3-203ENST00000578692 TLL1O43897 1013 aa18.18■□□□□ 0.5
CRLF3-203ENST00000578692 EFCAB14O75071 495 aa18.18■□□□□ 0.5
CRLF3-203ENST00000578692 LGR5O75473 907 aa18.18■□□□□ 0.5
CRLF3-203ENST00000578692 FOSP01100 380 aaPredicted RBP18.18■□□□□ 0.5
CRLF3-203ENST00000578692 ADD1P35611 737 aaKnown RBP18.18■□□□□ 0.5
CRLF3-203ENST00000578692 TCF7P36402 384 aaPredicted RBP18.18■□□□□ 0.5
CRLF3-203ENST00000578692 CCDC85BQ15834 202 aaPredicted RBP18.18■□□□□ 0.5
CRLF3-203ENST00000578692 PPP1R18Q6NYC8 613 aa18.18■□□□□ 0.5
CRLF3-203ENST00000578692 Q6ZUG5 572 aa18.18■□□□□ 0.5
CRLF3-203ENST00000578692 ZNF713Q8N859 430 aaPredicted RBP18.18■□□□□ 0.5
CRLF3-203ENST00000578692 JAKMIP1Q96N16 626 aaKnown RBP18.18■□□□□ 0.5
CRLF3-203ENST00000578692 ZBED2Q9BTP6 218 aa18.18■□□□□ 0.5
CRLF3-203ENST00000578692 PKD2L1Q9P0L9 805 aa18.18■□□□□ 0.5
CRLF3-203ENST00000578692 SNX14Q9Y5W7 946 aa18.18■□□□□ 0.5
CRLF3-203ENST00000578692 A0A0C4DFX4 3053 aa18.18■□□□□ 0.5
CRLF3-203ENST00000578692 GSTTP1A0A1W2PQM5 241 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms