RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 POLR2MP0CAP2 368 aa11.41□□□□□ -0.58
CRLF3-202ENST00000577725 PTGDRQ13258 359 aa11.41□□□□□ -0.58
CRLF3-202ENST00000577725 RAB30Q15771 203 aa11.41□□□□□ -0.58
CRLF3-202ENST00000577725 GJC2Q5T442 439 aaPredicted RBP11.41□□□□□ -0.58
CRLF3-202ENST00000577725 C4orf32Q8N8J7 132 aa11.41□□□□□ -0.58
CRLF3-202ENST00000577725 TRERF1Q96PN7 1200 aa11.41□□□□□ -0.58
CRLF3-202ENST00000577725 GLT8D2Q9H1C3 349 aa11.41□□□□□ -0.58
CRLF3-202ENST00000577725 RNF146Q9NTX7 359 aa11.41□□□□□ -0.58
CRLF3-202ENST00000577725 TMEM63CQ9P1W3 806 aa11.41□□□□□ -0.58
CRLF3-202ENST00000577725 BTBD7Q9P203 1132 aa11.41□□□□□ -0.58
CRLF3-202ENST00000577725 MSRAQ9UJ68 235 aa11.41□□□□□ -0.58
CRLF3-202ENST00000577725 ADAMTS5Q9UNA0 930 aa11.41□□□□□ -0.58
CRLF3-202ENST00000577725 CEP131Q9UPN4 1083 aa11.41□□□□□ -0.58
CRLF3-202ENST00000577725 WDFY4Q6ZS81 3184 aa11.4□□□□□ -0.58
CRLF3-202ENST00000577725 A0A1B0GVL5 298 aa11.4□□□□□ -0.58
CRLF3-202ENST00000577725 GRXCR1A8MXD5 290 aa11.4□□□□□ -0.58
CRLF3-202ENST00000577725 SLC37A4O43826 429 aa11.4□□□□□ -0.58
CRLF3-202ENST00000577725 CUTAO60888 179 aa11.4□□□□□ -0.58
CRLF3-202ENST00000577725 PPP6R2O75170 966 aa11.4□□□□□ -0.58
CRLF3-202ENST00000577725 CNMDO75829 334 aa11.4□□□□□ -0.58
CRLF3-202ENST00000577725 CLTBP09497 229 aa11.4□□□□□ -0.58
CRLF3-202ENST00000577725 CNGA1P29973 690 aa11.4□□□□□ -0.58
CRLF3-202ENST00000577725 MAPK4P31152 587 aa11.4□□□□□ -0.58
CRLF3-202ENST00000577725 HOXA7P31268 230 aaPredicted RBP11.4□□□□□ -0.58
CRLF3-202ENST00000577725 HERVK_113P62684 666 aa11.4□□□□□ -0.58
CRLF3-202ENST00000577725 ATP2C1P98194 919 aaPredicted RBP11.4□□□□□ -0.58
CRLF3-202ENST00000577725 TLE2Q04725 743 aa11.4□□□□□ -0.58
CRLF3-202ENST00000577725 TRAF1Q13077 416 aa11.4□□□□□ -0.58
CRLF3-202ENST00000577725 AP3B2Q13367 1082 aa11.4□□□□□ -0.58
CRLF3-202ENST00000577725 IL17AQ16552 155 aa11.4□□□□□ -0.58
CRLF3-202ENST00000577725 MFSD14CQ5VZR4 134 aa11.4□□□□□ -0.58
CRLF3-202ENST00000577725 NSMFQ6X4W1 530 aa11.4□□□□□ -0.58
CRLF3-202ENST00000577725 SLC30A10Q6XR72 485 aa11.4□□□□□ -0.58
CRLF3-202ENST00000577725 POTEDQ86YR6 584 aa11.4□□□□□ -0.58
CRLF3-202ENST00000577725 KRI1Q8N9T8 703 aaKnown RBP11.4□□□□□ -0.58
CRLF3-202ENST00000577725 ZFP91Q96JP5 570 aaPredicted RBP11.4□□□□□ -0.58
CRLF3-202ENST00000577725 SLC28A3Q9HAS3 691 aa11.4□□□□□ -0.58
CRLF3-202ENST00000577725 HOXC10Q9NYD6 342 aa11.4□□□□□ -0.58
CRLF3-202ENST00000577725 COL20A1Q9P218 1284 aa11.4□□□□□ -0.58
CRLF3-202ENST00000577725 ZNF214Q9UL59 606 aaPredicted RBP11.4□□□□□ -0.58
CRLF3-202ENST00000577725 CHD9Q3L8U1 2897 aa11.4□□□□□ -0.58
CRLF3-202ENST00000577725 DOCK3Q8IZD9 2030 aa11.4□□□□□ -0.59
CRLF3-202ENST00000577725 PLXNB2O15031 1838 aa11.39□□□□□ -0.59
CRLF3-202ENST00000577725 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.39□□□□□ -0.59
CRLF3-202ENST00000577725 VWA3AA6NCI4 1184 aa11.39□□□□□ -0.59
CRLF3-202ENST00000577725 SPDYE3A6NKU9 549 aa11.39□□□□□ -0.59
CRLF3-202ENST00000577725 PIK3CDO00329 1044 aa11.39□□□□□ -0.59
CRLF3-202ENST00000577725 KIAA0355O15063 1070 aa11.39□□□□□ -0.59
CRLF3-202ENST00000577725 NR1I2O75469 434 aa11.39□□□□□ -0.59
CRLF3-202ENST00000577725 FDX1P10109 184 aa11.39□□□□□ -0.59
CRLF3-202ENST00000577725 PTPREP23469 700 aa11.39□□□□□ -0.59
CRLF3-202ENST00000577725 STAT3P40763 770 aa11.39□□□□□ -0.59
CRLF3-202ENST00000577725 ARHGAP4P98171 946 aa11.39□□□□□ -0.59
CRLF3-202ENST00000577725 ADALQ6DHV7 355 aa11.39□□□□□ -0.59
CRLF3-202ENST00000577725 SHC4Q6S5L8 630 aa11.39□□□□□ -0.59
CRLF3-202ENST00000577725 LBX2Q6XYB7 198 aa11.39□□□□□ -0.59
CRLF3-202ENST00000577725 USP49Q70CQ1 688 aa11.39□□□□□ -0.59
CRLF3-202ENST00000577725 MRPS27Q92552 414 aaKnown RBP11.39□□□□□ -0.59
CRLF3-202ENST00000577725 GJA10Q969M2 543 aa11.39□□□□□ -0.59
CRLF3-202ENST00000577725 PURBQ96QR8 312 aaKnown RBP11.39□□□□□ -0.59
CRLF3-202ENST00000577725 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.39□□□□□ -0.59
CRLF3-202ENST00000577725 CSRNP2Q9H175 543 aa11.39□□□□□ -0.59
CRLF3-202ENST00000577725 TXNRD2Q9NNW7 524 aa11.39□□□□□ -0.59
CRLF3-202ENST00000577725 CD320Q9NPF0 282 aa11.39□□□□□ -0.59
CRLF3-202ENST00000577725 REV3LO60673 3130 aa11.38□□□□□ -0.59
CRLF3-202ENST00000577725 A0A1W2PQ27 194 aa11.38□□□□□ -0.59
CRLF3-202ENST00000577725 A0A1W2PQ64 194 aa11.38□□□□□ -0.59
CRLF3-202ENST00000577725 A0A1W2PQD8 194 aa11.38□□□□□ -0.59
CRLF3-202ENST00000577725 NEMFO60524 1076 aa11.38□□□□□ -0.59
CRLF3-202ENST00000577725 BMP15O95972 392 aa11.38□□□□□ -0.59
CRLF3-202ENST00000577725 ALADP13716 330 aa11.38□□□□□ -0.59
CRLF3-202ENST00000577725 PFKFB1P16118 471 aa11.38□□□□□ -0.59
CRLF3-202ENST00000577725 HSD17B4P51659 736 aa11.38□□□□□ -0.59
CRLF3-202ENST00000577725 NDUFA8P51970 172 aa11.38□□□□□ -0.59
CRLF3-202ENST00000577725 OAZ1P54368 228 aa11.38□□□□□ -0.59
CRLF3-202ENST00000577725 MORN1Q5T089 497 aa11.38□□□□□ -0.59
CRLF3-202ENST00000577725 CCDC73Q6ZRK6 1079 aa11.38□□□□□ -0.59
CRLF3-202ENST00000577725 GPRC5AQ8NFJ5 357 aa11.38□□□□□ -0.59
CRLF3-202ENST00000577725 SYTL5Q8TDW5 730 aaPredicted RBP11.38□□□□□ -0.59
CRLF3-202ENST00000577725 TAAR1Q96RJ0 339 aa11.38□□□□□ -0.59
CRLF3-202ENST00000577725 PHOX2BQ99453 314 aa11.38□□□□□ -0.59
CRLF3-202ENST00000577725 TEX13BQ9BXU2 312 aa11.38□□□□□ -0.59
CRLF3-202ENST00000577725 DACT1Q9NYF0 836 aa11.38□□□□□ -0.59
CRLF3-202ENST00000577725 DDX25Q9UHL0 483 aaKnown RBP11.38□□□□□ -0.59
CRLF3-202ENST00000577725 SRPRBQ9Y5M8 271 aaKnown RBP11.38□□□□□ -0.59
CRLF3-202ENST00000577725 LCTP09848 1927 aa11.38□□□□□ -0.59
CRLF3-202ENST00000577725 LRRC37A2A6NM11 1700 aa11.38□□□□□ -0.59
CRLF3-202ENST00000577725 FOSP01100 380 aaPredicted RBP11.37□□□□□ -0.59
CRLF3-202ENST00000577725 OR52Z1P0C646 297 aa11.37□□□□□ -0.59
CRLF3-202ENST00000577725 CMA1P23946 247 aa11.37□□□□□ -0.59
CRLF3-202ENST00000577725 SREBF1P36956 1147 aa11.37□□□□□ -0.59
CRLF3-202ENST00000577725 ADCYAP1R1P41586 468 aa11.37□□□□□ -0.59
CRLF3-202ENST00000577725 RPS6P62753 249 aaKnown RBP11.37□□□□□ -0.59
CRLF3-202ENST00000577725 BAATQ14032 418 aaPredicted RBP11.37□□□□□ -0.59
CRLF3-202ENST00000577725 CALCRLQ16602 461 aa11.37□□□□□ -0.59
CRLF3-202ENST00000577725 Q3C1V9 767 aa11.37□□□□□ -0.59
CRLF3-202ENST00000577725 RASIP1Q5U651 963 aa11.37□□□□□ -0.59
CRLF3-202ENST00000577725 RESP18Q5W5W9 173 aa11.37□□□□□ -0.59
CRLF3-202ENST00000577725 RNF207Q6ZRF8 634 aa11.37□□□□□ -0.59
CRLF3-202ENST00000577725 GPR142Q7Z601 462 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms