RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 GOLGA8OA6NCC3 632 aa9.53□□□□□ -0.88
CDH8-203ENST00000577390 USP27XA6NNY8 438 aa9.53□□□□□ -0.88
CDH8-203ENST00000577390 GOLGA8NF8WBI6 632 aa9.53□□□□□ -0.88
CDH8-203ENST00000577390 BMP15O95972 392 aa9.53□□□□□ -0.88
CDH8-203ENST00000577390 FOSP01100 380 aaPredicted RBP9.53□□□□□ -0.88
CDH8-203ENST00000577390 ODR4Q5SWX8 454 aa9.53□□□□□ -0.88
CDH8-203ENST00000577390 FAM102BQ5T8I3 360 aa9.53□□□□□ -0.88
CDH8-203ENST00000577390 MAP7D3Q8IWC1 876 aa9.53□□□□□ -0.88
CDH8-203ENST00000577390 FHDC1Q9C0D6 1143 aaPredicted RBP9.53□□□□□ -0.88
CDH8-203ENST00000577390 ARHGEF9O43307 516 aa9.53□□□□□ -0.88
CDH8-203ENST00000577390 ANP32DO95626 131 aa9.53□□□□□ -0.88
CDH8-203ENST00000577390 PDHA1P08559 390 aa9.53□□□□□ -0.88
CDH8-203ENST00000577390 SPAG1Q07617 926 aa9.53□□□□□ -0.88
CDH8-203ENST00000577390 OLFML1Q6UWY5 402 aa9.53□□□□□ -0.88
CDH8-203ENST00000577390 ZBTB8OSQ8IWT0 167 aa9.53□□□□□ -0.88
CDH8-203ENST00000577390 VPS37AQ8NEZ2 397 aa9.53□□□□□ -0.88
CDH8-203ENST00000577390 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.53□□□□□ -0.88
CDH8-203ENST00000577390 NAF1Q96HR8 494 aaKnown RBP9.53□□□□□ -0.88
CDH8-203ENST00000577390 HMG20BQ9P0W2 317 aa9.53□□□□□ -0.88
CDH8-203ENST00000577390 TSR3Q9UJK0 312 aaKnown RBP9.53□□□□□ -0.88
CDH8-203ENST00000577390 SYNPO2Q9UMS6 1093 aa9.53□□□□□ -0.88
CDH8-203ENST00000577390 TARSL2A2RTX5 802 aaKnown RBP9.52□□□□□ -0.88
CDH8-203ENST00000577390 PI4K2BG5E9Z4 385 aa9.52□□□□□ -0.88
CDH8-203ENST00000577390 ATXN3P54252 364 aaPredicted RBP9.52□□□□□ -0.88
CDH8-203ENST00000577390 ITPRIPL1Q6GPH6 555 aa9.52□□□□□ -0.88
CDH8-203ENST00000577390 ANKS3Q6ZW76 656 aa9.52□□□□□ -0.88
CDH8-203ENST00000577390 PI4K2BQ8TCG2 481 aa9.52□□□□□ -0.88
CDH8-203ENST00000577390 SLC26A7Q8TE54 656 aa9.52□□□□□ -0.88
CDH8-203ENST00000577390 EXT2Q93063 718 aa9.52□□□□□ -0.88
CDH8-203ENST00000577390 NBPF26B4DH59 902 aa9.52□□□□□ -0.88
CDH8-203ENST00000577390 SYNCRIPO60506 623 aaKnown RBP9.52□□□□□ -0.88
CDH8-203ENST00000577390 PDE6BP35913 854 aa9.52□□□□□ -0.88
CDH8-203ENST00000577390 CSE1LP55060 971 aaKnown RBP9.52□□□□□ -0.88
CDH8-203ENST00000577390 PDE4DQ08499 809 aa9.52□□□□□ -0.88
CDH8-203ENST00000577390 EMBQ6PCB8 327 aa9.52□□□□□ -0.88
CDH8-203ENST00000577390 SV2BQ7L1I2 683 aa9.52□□□□□ -0.88
CDH8-203ENST00000577390 CROCCP2Q86T23 111 aa9.52□□□□□ -0.88
CDH8-203ENST00000577390 MAML3Q96JK9 1138 aa9.52□□□□□ -0.88
CDH8-203ENST00000577390 TBC1D7Q9P0N9 293 aa9.52□□□□□ -0.88
CDH8-203ENST00000577390 PCDHGA4Q9Y5G9 962 aa9.52□□□□□ -0.88
CDH8-203ENST00000577390 LRRC53A6NM62 1247 aa9.52□□□□□ -0.89
CDH8-203ENST00000577390 ATP2B4P23634 1241 aa9.52□□□□□ -0.89
CDH8-203ENST00000577390 LETM2Q2VYF4 491 aa9.52□□□□□ -0.89
CDH8-203ENST00000577390 FBXL5Q9UKA1 691 aa9.52□□□□□ -0.89
CDH8-203ENST00000577390 POGZQ7Z3K3 1410 aa9.52□□□□□ -0.89
CDH8-203ENST00000577390 KPNA1P52294 538 aaPredicted RBP9.52□□□□□ -0.89
CDH8-203ENST00000577390 TTC23LQ6PF05 361 aa9.52□□□□□ -0.89
CDH8-203ENST00000577390 DNAAF3Q8N9W5 541 aa9.52□□□□□ -0.89
CDH8-203ENST00000577390 CENPTQ96BT3 561 aa9.52□□□□□ -0.89
CDH8-203ENST00000577390 GORASP1Q9BQQ3 440 aa9.52□□□□□ -0.89
CDH8-203ENST00000577390 CHGBP05060 677 aa9.52□□□□□ -0.89
CDH8-203ENST00000577390 STX17P56962 302 aa9.52□□□□□ -0.89
CDH8-203ENST00000577390 ST13P4Q8IZP2 240 aaPredicted RBP9.52□□□□□ -0.89
CDH8-203ENST00000577390 TRAF3IP3Q9Y228 551 aa9.52□□□□□ -0.89
CDH8-203ENST00000577390 PRG3Q9Y2Y8 225 aaPredicted RBP9.52□□□□□ -0.89
CDH8-203ENST00000577390 IMPG1Q17R60 797 aa9.52□□□□□ -0.89
CDH8-203ENST00000577390 SNX30Q5VWJ9 437 aa9.52□□□□□ -0.89
CDH8-203ENST00000577390 HAUS3Q68CZ6 603 aa9.52□□□□□ -0.89
CDH8-203ENST00000577390 DENND2CQ68D51 928 aa9.52□□□□□ -0.89
CDH8-203ENST00000577390 SLC40A1Q9NP59 571 aa9.52□□□□□ -0.89
CDH8-203ENST00000577390 CORO1CQ9ULV4 474 aaPredicted RBP9.52□□□□□ -0.89
CDH8-203ENST00000577390 PCM1Q15154 2024 aa9.52□□□□□ -0.89
CDH8-203ENST00000577390 ATP8B3O60423 1300 aa9.52□□□□□ -0.89
CDH8-203ENST00000577390 DNAJC6O75061 913 aa9.52□□□□□ -0.89
CDH8-203ENST00000577390 SASH1O94885 1247 aa9.52□□□□□ -0.89
CDH8-203ENST00000577390 CCND1P24385 295 aa9.52□□□□□ -0.89
CDH8-203ENST00000577390 IRF6O14896 467 aa9.52□□□□□ -0.89
CDH8-203ENST00000577390 KCNB1Q14721 858 aa9.52□□□□□ -0.89
CDH8-203ENST00000577390 TRAPPC3LQ5T215 181 aa9.52□□□□□ -0.89
CDH8-203ENST00000577390 MIGA1Q8NAN2 632 aa9.52□□□□□ -0.89
CDH8-203ENST00000577390 POMGNT2Q8NAT1 580 aa9.52□□□□□ -0.89
CDH8-203ENST00000577390 RETREG2Q8NC44 543 aa9.52□□□□□ -0.89
CDH8-203ENST00000577390 ZKSCAN4Q969J2 545 aaPredicted RBP9.52□□□□□ -0.89
CDH8-203ENST00000577390 PRDM16Q9HAZ2 1276 aa9.52□□□□□ -0.89
CDH8-203ENST00000577390 HPCAL4Q9UM19 191 aa9.52□□□□□ -0.89
CDH8-203ENST00000577390 PDS5BQ9NTI5 1447 aa9.51□□□□□ -0.89
CDH8-203ENST00000577390 RTN3O95197 1032 aaPredicted RBP9.51□□□□□ -0.89
CDH8-203ENST00000577390 CFBP00751 764 aa9.51□□□□□ -0.89
CDH8-203ENST00000577390 RNASE11Q8TAA1 199 aaKnown RBP9.51□□□□□ -0.89
CDH8-203ENST00000577390 SMAD5Q99717 465 aaKnown RBP9.51□□□□□ -0.89
CDH8-203ENST00000577390 DESI2Q9BSY9 194 aa9.51□□□□□ -0.89
CDH8-203ENST00000577390 GNPATO15228 680 aa9.51□□□□□ -0.89
CDH8-203ENST00000577390 NNTQ13423 1086 aa9.51□□□□□ -0.89
CDH8-203ENST00000577390 OXCT2Q9BYC2 517 aaPredicted RBP9.51□□□□□ -0.89
CDH8-203ENST00000577390 AIPL1Q9NZN9 384 aa9.51□□□□□ -0.89
CDH8-203ENST00000577390 DBNLQ9UJU6 430 aaKnown RBP9.51□□□□□ -0.89
CDH8-203ENST00000577390 HADHAP40939 763 aa9.51□□□□□ -0.89
CDH8-203ENST00000577390 TRPC1P48995 793 aa9.51□□□□□ -0.89
CDH8-203ENST00000577390 NR5A1Q13285 461 aa9.51□□□□□ -0.89
CDH8-203ENST00000577390 THOC5Q13769 683 aaKnown RBP9.51□□□□□ -0.89
CDH8-203ENST00000577390 LRRC31Q6UY01 552 aa9.51□□□□□ -0.89
CDH8-203ENST00000577390 FGD2Q7Z6J4 655 aa9.51□□□□□ -0.89
CDH8-203ENST00000577390 CENPSQ8N2Z9 138 aa9.51□□□□□ -0.89
CDH8-203ENST00000577390 MAGEB6Q8N7X4 407 aa9.51□□□□□ -0.89
CDH8-203ENST00000577390 NLRP4Q96MN2 994 aa9.51□□□□□ -0.89
CDH8-203ENST00000577390 FUT8Q9BYC5 575 aa9.51□□□□□ -0.89
CDH8-203ENST00000577390 AS3MTQ9HBK9 375 aa9.51□□□□□ -0.89
CDH8-203ENST00000577390 ASIC2Q16515 512 aa9.51□□□□□ -0.89
CDH8-203ENST00000577390 WDR75Q8IWA0 830 aaKnown RBP9.51□□□□□ -0.89
CDH8-203ENST00000577390 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms