RNA–Protein interactions for RNA: ENST00000577315.5

MKS1-205, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-205ENST00000577315 SORBS3O60504 671 aa17.16■□□□□ 0.34
MKS1-205ENST00000577315 GNAT1P11488 350 aa17.16■□□□□ 0.34
MKS1-205ENST00000577315 TRIM71Q2Q1W2 868 aaKnown RBP17.16■□□□□ 0.34
MKS1-205ENST00000577315 CYFIP1Q7L576 1253 aa17.16■□□□□ 0.34
MKS1-205ENST00000577315 SERINC5Q86VE9 423 aa17.16■□□□□ 0.34
MKS1-205ENST00000577315 MICU3Q86XE3 530 aa17.16■□□□□ 0.34
MKS1-205ENST00000577315 HERC6Q8IVU3 1022 aa17.16■□□□□ 0.34
MKS1-205ENST00000577315 ATP6V0A1Q93050 837 aa17.16■□□□□ 0.34
MKS1-205ENST00000577315 GPR20Q99678 358 aa17.16■□□□□ 0.34
MKS1-205ENST00000577315 LRRC2Q9BYS8 371 aa17.16■□□□□ 0.34
MKS1-205ENST00000577315 hCG_1984214I3L0E3 225 aa17.15■□□□□ 0.34
MKS1-205ENST00000577315 CAND2O75155 1236 aa17.15■□□□□ 0.34
MKS1-205ENST00000577315 IGFBP4P22692 258 aa17.15■□□□□ 0.34
MKS1-205ENST00000577315 HOXC8P31273 242 aa17.15■□□□□ 0.34
MKS1-205ENST00000577315 EXOSC10Q01780 885 aaKnown RBP17.15■□□□□ 0.34
MKS1-205ENST00000577315 SEMA3FQ13275 785 aa17.15■□□□□ 0.34
MKS1-205ENST00000577315 APOA5Q6Q788 366 aa17.15■□□□□ 0.34
MKS1-205ENST00000577315 CMTR1Q8N1G2 835 aaKnown RBP17.15■□□□□ 0.34
MKS1-205ENST00000577315 CCDC82Q8N4S0 544 aa17.15■□□□□ 0.34
MKS1-205ENST00000577315 ZNF713Q8N859 430 aaPredicted RBP17.15■□□□□ 0.34
MKS1-205ENST00000577315 ZBTB43O43298 467 aa17.14■□□□□ 0.33
MKS1-205ENST00000577315 NBNO60934 754 aa17.14■□□□□ 0.33
MKS1-205ENST00000577315 CA3P07451 260 aa17.14■□□□□ 0.33
MKS1-205ENST00000577315 SMIM10L2AP0DMW4 78 aa17.14■□□□□ 0.33
MKS1-205ENST00000577315 SMIM10L2BP0DMW5 78 aa17.14■□□□□ 0.33
MKS1-205ENST00000577315 MYOGP15173 224 aa17.14■□□□□ 0.33
MKS1-205ENST00000577315 RCAN1P53805 252 aa17.14■□□□□ 0.33
MKS1-205ENST00000577315 WDR5P61964 334 aaKnown RBP17.14■□□□□ 0.33
MKS1-205ENST00000577315 IKBKEQ14164 716 aa17.14■□□□□ 0.33
MKS1-205ENST00000577315 GPNMBQ14956 572 aa17.14■□□□□ 0.33
MKS1-205ENST00000577315 ZNF618Q5T7W0 954 aa17.14■□□□□ 0.33
MKS1-205ENST00000577315 PPP1R18Q6NYC8 613 aa17.14■□□□□ 0.33
MKS1-205ENST00000577315 GLT8D2Q9H1C3 349 aa17.14■□□□□ 0.33
MKS1-205ENST00000577315 TSPYL2Q9H2G4 693 aaPredicted RBP17.14■□□□□ 0.33
MKS1-205ENST00000577315 EYSQ5T1H1 3165 aa17.14■□□□□ 0.33
MKS1-205ENST00000577315 PRRC2BQ5JSZ5 2229 aaKnown RBP17.13■□□□□ 0.33
MKS1-205ENST00000577315 PRUNE2Q8WUY3 3088 aa17.13■□□□□ 0.33
MKS1-205ENST00000577315 RSPH10B2B2RC85 870 aa17.13■□□□□ 0.33
MKS1-205ENST00000577315 TLL1O43897 1013 aa17.13■□□□□ 0.33
MKS1-205ENST00000577315 LGR5O75473 907 aa17.13■□□□□ 0.33
MKS1-205ENST00000577315 RSPH10BP0C881 870 aa17.13■□□□□ 0.33
MKS1-205ENST00000577315 THPOP40225 353 aa17.13■□□□□ 0.33
MKS1-205ENST00000577315 ZNF200P98182 395 aaPredicted RBP17.13■□□□□ 0.33
MKS1-205ENST00000577315 COL9A3Q14050 684 aaPredicted RBP17.13■□□□□ 0.33
MKS1-205ENST00000577315 ADGRE1Q14246 886 aa17.13■□□□□ 0.33
MKS1-205ENST00000577315 RTN1Q16799 776 aa17.13■□□□□ 0.33
MKS1-205ENST00000577315 HEATR3Q7Z4Q2 680 aa17.13■□□□□ 0.33
MKS1-205ENST00000577315 RAB11FIP4Q86YS3 637 aa17.13■□□□□ 0.33
MKS1-205ENST00000577315 USP38Q8NB14 1042 aa17.13■□□□□ 0.33
MKS1-205ENST00000577315 RNPEPQ9H4A4 650 aa17.13■□□□□ 0.33
MKS1-205ENST00000577315 PCDHA6Q9UN73 950 aa17.13■□□□□ 0.33
MKS1-205ENST00000577315 PCDHA8Q9Y5H6 950 aa17.13■□□□□ 0.33
MKS1-205ENST00000577315 CNTNAP5Q8WYK1 1306 aa17.13■□□□□ 0.33
MKS1-205ENST00000577315 GTPBP6O43824 516 aaPredicted RBP17.12■□□□□ 0.33
MKS1-205ENST00000577315 FOSP01100 380 aaPredicted RBP17.12■□□□□ 0.33
MKS1-205ENST00000577315 POU3F3P20264 500 aaPredicted RBP17.12■□□□□ 0.33
MKS1-205ENST00000577315 TJAP1Q5JTD0 557 aa17.12■□□□□ 0.33
MKS1-205ENST00000577315 TRAF7Q6Q0C0 670 aa17.12■□□□□ 0.33
MKS1-205ENST00000577315 ATXN2LQ8WWM7 1075 aaKnown RBP17.12■□□□□ 0.33
MKS1-205ENST00000577315 PPM1EQ8WY54 764 aa17.12■□□□□ 0.33
MKS1-205ENST00000577315 SEPT1Q8WYJ6 367 aa17.12■□□□□ 0.33
MKS1-205ENST00000577315 ZBED2Q9BTP6 218 aa17.12■□□□□ 0.33
MKS1-205ENST00000577315 BCAS3Q9H6U6 928 aa17.12■□□□□ 0.33
MKS1-205ENST00000577315 THEGQ9P2T0 379 aa17.12■□□□□ 0.33
MKS1-205ENST00000577315 UBIAD1Q9Y5Z9 338 aa17.12■□□□□ 0.33
MKS1-205ENST00000577315 SIP14410 1827 aa17.12■□□□□ 0.33
MKS1-205ENST00000577315 NAPAP54920 295 aa17.11■□□□□ 0.33
MKS1-205ENST00000577315 FGD1P98174 961 aa17.11■□□□□ 0.33
MKS1-205ENST00000577315 TAP1Q03518 808 aa17.11■□□□□ 0.33
MKS1-205ENST00000577315 MTMR1Q13613 665 aa17.11■□□□□ 0.33
MKS1-205ENST00000577315 HIC1Q14526 733 aa17.11■□□□□ 0.33
MKS1-205ENST00000577315 UBE2SQ16763 222 aa17.11■□□□□ 0.33
MKS1-205ENST00000577315 ADCK5Q3MIX3 580 aa17.11■□□□□ 0.33
MKS1-205ENST00000577315 UTP14CQ5TAP6 766 aaKnown RBP17.11■□□□□ 0.33
MKS1-205ENST00000577315 RASEFQ8IZ41 740 aa17.11■□□□□ 0.33
MKS1-205ENST00000577315 WNT8BQ93098 351 aa17.11■□□□□ 0.33
MKS1-205ENST00000577315 CCDC136Q96JN2 1154 aa17.11■□□□□ 0.33
MKS1-205ENST00000577315 RIC8AQ9NPQ8 531 aa17.11■□□□□ 0.33
MKS1-205ENST00000577315 JADE2Q9NQC1 790 aa17.11■□□□□ 0.33
MKS1-205ENST00000577315 CHD9Q3L8U1 2897 aa17.11■□□□□ 0.33
MKS1-205ENST00000577315 NRCAMQ92823 1304 aa17.11■□□□□ 0.33
MKS1-205ENST00000577315 MYH9P35579 1960 aaKnown RBP17.1■□□□□ 0.33
MKS1-205ENST00000577315 KLF18A0A0U1RQI7 1052 aa17.1■□□□□ 0.33
MKS1-205ENST00000577315 CCDC196A0A1B0GTZ2 297 aa17.1■□□□□ 0.33
MKS1-205ENST00000577315 hCG_1642624A0A1W2PR95 340 aa17.1■□□□□ 0.33
MKS1-205ENST00000577315 GOLGA8AA7E2F4 631 aa17.1■□□□□ 0.33
MKS1-205ENST00000577315 GOLGA8BA8MQT2 603 aa17.1■□□□□ 0.33
MKS1-205ENST00000577315 TREHO43280 583 aa17.1■□□□□ 0.33
MKS1-205ENST00000577315 GJB5O95377 273 aa17.1■□□□□ 0.33
MKS1-205ENST00000577315 KCNA2P16389 499 aa17.1■□□□□ 0.33
MKS1-205ENST00000577315 ITGB5P18084 799 aa17.1■□□□□ 0.33
MKS1-205ENST00000577315 TCF7P36402 384 aaPredicted RBP17.1■□□□□ 0.33
MKS1-205ENST00000577315 WWC2Q6AWC2 1192 aa17.1■□□□□ 0.33
MKS1-205ENST00000577315 SKAP1Q86WV1 359 aa17.1■□□□□ 0.33
MKS1-205ENST00000577315 TNPO1Q92973 898 aaKnown RBP17.1■□□□□ 0.33
MKS1-205ENST00000577315 RAD9AQ99638 391 aa17.1■□□□□ 0.33
MKS1-205ENST00000577315 BRPF3Q9ULD4 1205 aa17.1■□□□□ 0.33
MKS1-205ENST00000577315 ATP9AO75110 1047 aa17.09■□□□□ 0.33
MKS1-205ENST00000577315 RPLP2P05387 115 aaKnown RBP17.09■□□□□ 0.33
MKS1-205ENST00000577315 ADCY7P51828 1080 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms