RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 ATP2B1P20020 1258 aa8.99□□□□□ -0.97
CCDC40-215ENST00000576033 ZNF76P36508 570 aa8.99□□□□□ -0.97
CCDC40-215ENST00000576033 RTP1P59025 263 aa8.99□□□□□ -0.97
CCDC40-215ENST00000576033 NONOQ15233 471 aaKnown RBP eCLIP8.99□□□□□ -0.97
CCDC40-215ENST00000576033 GNPTABQ3T906 1256 aa8.99□□□□□ -0.97
CCDC40-215ENST00000576033 CEP55Q53EZ4 464 aa8.99□□□□□ -0.97
CCDC40-215ENST00000576033 UTP14CQ5TAP6 766 aaKnown RBP8.99□□□□□ -0.97
CCDC40-215ENST00000576033 NECAB2Q7Z6G3 386 aa8.99□□□□□ -0.97
CCDC40-215ENST00000576033 SH3RF1Q7Z6J0 888 aa8.99□□□□□ -0.97
CCDC40-215ENST00000576033 DHX37Q8IY37 1157 aaKnown RBP8.99□□□□□ -0.97
CCDC40-215ENST00000576033 ANKLE1Q8NAG6 615 aa8.99□□□□□ -0.97
CCDC40-215ENST00000576033 BICD2Q8TD16 824 aa8.99□□□□□ -0.97
CCDC40-215ENST00000576033 GPRASP2Q96D09 838 aa8.99□□□□□ -0.97
CCDC40-215ENST00000576033 SPATA33Q96N06 139 aa8.99□□□□□ -0.97
CCDC40-215ENST00000576033 MPHOSPH6Q99547 160 aaKnown RBP8.99□□□□□ -0.97
CCDC40-215ENST00000576033 GPR20Q99678 358 aa8.99□□□□□ -0.97
CCDC40-215ENST00000576033 MAF1Q9H063 256 aa8.99□□□□□ -0.97
CCDC40-215ENST00000576033 ZMYND8Q9ULU4 1186 aaPredicted RBP8.99□□□□□ -0.97
CCDC40-215ENST00000576033 SMC3Q9UQE7 1217 aa8.99□□□□□ -0.97
CCDC40-215ENST00000576033 CDH23Q9H251 3354 aa8.99□□□□□ -0.97
CCDC40-215ENST00000576033 CCDC194A0A1B0GVG4 234 aa8.98□□□□□ -0.97
CCDC40-215ENST00000576033 GSTTP1A0A1W2PQM5 241 aa8.98□□□□□ -0.97
CCDC40-215ENST00000576033 A6NJR5 290 aa8.98□□□□□ -0.97
CCDC40-215ENST00000576033 MEIS1O00470 390 aa8.98□□□□□ -0.97
CCDC40-215ENST00000576033 DHX15O43143 795 aaKnown RBP8.98□□□□□ -0.97
CCDC40-215ENST00000576033 CHMP2AO43633 222 aa8.98□□□□□ -0.97
CCDC40-215ENST00000576033 CCNT1O60563 726 aaKnown RBP8.98□□□□□ -0.97
CCDC40-215ENST00000576033 FOSP01100 380 aaPredicted RBP8.98□□□□□ -0.97
CCDC40-215ENST00000576033 LGALS2P05162 132 aa8.98□□□□□ -0.97
CCDC40-215ENST00000576033 CYP3A4P08684 503 aa8.98□□□□□ -0.97
CCDC40-215ENST00000576033 ITGB8P26012 769 aa8.98□□□□□ -0.97
CCDC40-215ENST00000576033 MARK3P27448 753 aa8.98□□□□□ -0.97
CCDC40-215ENST00000576033 NKX3-2P78367 333 aa8.98□□□□□ -0.97
CCDC40-215ENST00000576033 HMGN5P82970 282 aaKnown RBP8.98□□□□□ -0.97
CCDC40-215ENST00000576033 ZNF200P98182 395 aaPredicted RBP8.98□□□□□ -0.97
CCDC40-215ENST00000576033 PKP1Q13835 747 aa8.98□□□□□ -0.97
CCDC40-215ENST00000576033 TRIM29Q14134 588 aa8.98□□□□□ -0.97
CCDC40-215ENST00000576033 FOXD4L5Q5VV16 416 aaPredicted RBP8.98□□□□□ -0.97
CCDC40-215ENST00000576033 FAM173BQ6P4H8 233 aa8.98□□□□□ -0.97
CCDC40-215ENST00000576033 SLC39A5Q6ZMH5 540 aa8.98□□□□□ -0.97
CCDC40-215ENST00000576033 KRT25Q7Z3Z0 450 aa8.98□□□□□ -0.97
CCDC40-215ENST00000576033 NLRX1Q86UT6 975 aa8.98□□□□□ -0.97
CCDC40-215ENST00000576033 FERMT3Q86UX7 667 aa8.98□□□□□ -0.97
CCDC40-215ENST00000576033 ARRDC4Q8NCT1 418 aa8.98□□□□□ -0.97
CCDC40-215ENST00000576033 FBXO18Q8NFZ0 1043 aa8.98□□□□□ -0.97
CCDC40-215ENST00000576033 PPTC7Q8NI37 304 aa8.98□□□□□ -0.97
CCDC40-215ENST00000576033 ETNPPLQ8TBG4 499 aa8.98□□□□□ -0.97
CCDC40-215ENST00000576033 FOXD4L4Q8WXT5 416 aaPredicted RBP8.98□□□□□ -0.97
CCDC40-215ENST00000576033 WASF1Q92558 559 aa8.98□□□□□ -0.97
CCDC40-215ENST00000576033 WNT8BQ93098 351 aa8.98□□□□□ -0.97
CCDC40-215ENST00000576033 CHAMP1Q96JM3 812 aa8.98□□□□□ -0.97
CCDC40-215ENST00000576033 PCYT2Q99447 389 aa8.98□□□□□ -0.97
CCDC40-215ENST00000576033 FTOQ9C0B1 505 aaKnown RBP eCLIP8.98□□□□□ -0.97
CCDC40-215ENST00000576033 TMEM60Q9H2L4 133 aa8.98□□□□□ -0.97
CCDC40-215ENST00000576033 EHMT1Q9H9B1 1298 aa8.98□□□□□ -0.97
CCDC40-215ENST00000576033 MLXIPQ9HAP2 919 aa8.98□□□□□ -0.97
CCDC40-215ENST00000576033 STARD7Q9NQZ5 370 aa8.98□□□□□ -0.97
CCDC40-215ENST00000576033 TRMT13Q9NUP7 481 aaKnown RBP8.98□□□□□ -0.97
CCDC40-215ENST00000576033 UMODL1Q5DID0 1318 aa8.98□□□□□ -0.97
CCDC40-215ENST00000576033 VPS37CA5D8V6 355 aaPredicted RBP8.97□□□□□ -0.97
CCDC40-215ENST00000576033 B4DLN1 442 aa8.97□□□□□ -0.97
CCDC40-215ENST00000576033 IPO5O00410 1097 aaKnown RBP8.97□□□□□ -0.97
CCDC40-215ENST00000576033 NKRFO15226 690 aaKnown RBP eCLIP8.97□□□□□ -0.97
CCDC40-215ENST00000576033 B4GALT4O60513 344 aa8.97□□□□□ -0.97
CCDC40-215ENST00000576033 XBP1P17861 261 aa8.97□□□□□ -0.97
CCDC40-215ENST00000576033 CIITAP33076 1130 aa8.97□□□□□ -0.97
CCDC40-215ENST00000576033 TCF7P36402 384 aaPredicted RBP8.97□□□□□ -0.97
CCDC40-215ENST00000576033 CPT1AP50416 773 aa8.97□□□□□ -0.97
CCDC40-215ENST00000576033 TOB1P50616 345 aaPredicted RBP8.97□□□□□ -0.97
CCDC40-215ENST00000576033 MLLT1Q03111 559 aaPredicted RBP8.97□□□□□ -0.97
CCDC40-215ENST00000576033 SNX17Q15036 470 aa8.97□□□□□ -0.97
CCDC40-215ENST00000576033 UGCGQ16739 394 aa8.97□□□□□ -0.97
CCDC40-215ENST00000576033 NBPF20Q3BBV1 942 aa8.97□□□□□ -0.97
CCDC40-215ENST00000576033 MCTP1Q6DN14 999 aa8.97□□□□□ -0.97
CCDC40-215ENST00000576033 XRRA1Q6P2D8 792 aa8.97□□□□□ -0.97
CCDC40-215ENST00000576033 METTL7BQ6UX53 244 aa8.97□□□□□ -0.97
CCDC40-215ENST00000576033 NEK8Q86SG6 692 aa8.97□□□□□ -0.97
CCDC40-215ENST00000576033 CCDC60Q8IWA6 550 aaPredicted RBP8.97□□□□□ -0.97
CCDC40-215ENST00000576033 HAS1Q92839 578 aa8.97□□□□□ -0.97
CCDC40-215ENST00000576033 EMID1Q96A84 441 aaPredicted RBP8.97□□□□□ -0.97
CCDC40-215ENST00000576033 CTAGE1Q96RT6 745 aa8.97□□□□□ -0.97
CCDC40-215ENST00000576033 ZNF577Q9BSK1 485 aa8.97□□□□□ -0.97
CCDC40-215ENST00000576033 C16orf70Q9BSU1 422 aa8.97□□□□□ -0.97
CCDC40-215ENST00000576033 GLT8D2Q9H1C3 349 aa8.97□□□□□ -0.97
CCDC40-215ENST00000576033 TRPV6Q9H1D0 765 aa8.97□□□□□ -0.97
CCDC40-215ENST00000576033 UNC45AQ9H3U1 944 aa8.97□□□□□ -0.97
CCDC40-215ENST00000576033 SPC25Q9HBM1 224 aa8.97□□□□□ -0.97
CCDC40-215ENST00000576033 JPH1Q9HDC5 661 aaPredicted RBP8.97□□□□□ -0.97
CCDC40-215ENST00000576033 PRDM5Q9NQX1 630 aaPredicted RBP8.97□□□□□ -0.97
CCDC40-215ENST00000576033 DDX25Q9UHL0 483 aaKnown RBP8.97□□□□□ -0.97
CCDC40-215ENST00000576033 TMEM150BA6NC51 233 aa8.96□□□□□ -0.98
CCDC40-215ENST00000576033 TRIM43BA6NCK2 446 aa8.96□□□□□ -0.98
CCDC40-215ENST00000576033 MOXD2PA6NHM9 499 aa8.96□□□□□ -0.98
CCDC40-215ENST00000576033 EML1O00423 815 aa8.96□□□□□ -0.98
CCDC40-215ENST00000576033 STAM2O75886 525 aa8.96□□□□□ -0.98
CCDC40-215ENST00000576033 F2P00734 622 aa8.96□□□□□ -0.98
CCDC40-215ENST00000576033 HOXD8P13378 290 aaPredicted RBP8.96□□□□□ -0.98
CCDC40-215ENST00000576033 MCM7P33993 719 aa8.96□□□□□ -0.98
CCDC40-215ENST00000576033 PSEN2P49810 448 aa8.96□□□□□ -0.98
CCDC40-215ENST00000576033 ACTR2P61160 394 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms