RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 GPR20Q99678 358 aa13.01□□□□□ -0.33
RPAIN-214ENST00000574003 LARP6Q9BRS8 491 aaKnown RBP13.01□□□□□ -0.33
RPAIN-214ENST00000574003 OSBPL7Q9BZF2 842 aa13.01□□□□□ -0.33
RPAIN-214ENST00000574003 PRDM12Q9H4Q4 367 aa13.01□□□□□ -0.33
RPAIN-214ENST00000574003 RBM28Q9NW13 759 aaKnown RBP13.01□□□□□ -0.33
RPAIN-214ENST00000574003 SLC4A7Q9Y6M7 1214 aa13.01□□□□□ -0.33
RPAIN-214ENST00000574003 STXBP3O00186 592 aa13□□□□□ -0.33
RPAIN-214ENST00000574003 PITPNM1O00562 1244 aa13□□□□□ -0.33
RPAIN-214ENST00000574003 NOP56O00567 594 aaKnown RBP13□□□□□ -0.33
RPAIN-214ENST00000574003 NBNO60934 754 aa13□□□□□ -0.33
RPAIN-214ENST00000574003 ARHGEF15O94989 841 aa13□□□□□ -0.33
RPAIN-214ENST00000574003 SMIM10L2AP0DMW4 78 aa13□□□□□ -0.33
RPAIN-214ENST00000574003 SMIM10L2BP0DMW5 78 aa13□□□□□ -0.33
RPAIN-214ENST00000574003 CKBP12277 381 aa13□□□□□ -0.33
RPAIN-214ENST00000574003 FOSL2P15408 326 aa13□□□□□ -0.33
RPAIN-214ENST00000574003 FGD1P98174 961 aa13□□□□□ -0.33
RPAIN-214ENST00000574003 MBTPS1Q14703 1052 aa13□□□□□ -0.33
RPAIN-214ENST00000574003 ZNF618Q5T7W0 954 aa13□□□□□ -0.33
RPAIN-214ENST00000574003 TRAF7Q6Q0C0 670 aa13□□□□□ -0.33
RPAIN-214ENST00000574003 BLOC1S2Q6QNY1 142 aa13□□□□□ -0.33
RPAIN-214ENST00000574003 METTL7BQ6UX53 244 aa13□□□□□ -0.33
RPAIN-214ENST00000574003 LRRC8DQ7L1W4 858 aa13□□□□□ -0.33
RPAIN-214ENST00000574003 MAFAQ8NHW3 353 aaPredicted RBP13□□□□□ -0.33
RPAIN-214ENST00000574003 CYP2W1Q8TAV3 490 aa13□□□□□ -0.33
RPAIN-214ENST00000574003 UIMC1Q96RL1 719 aa13□□□□□ -0.33
RPAIN-214ENST00000574003 KATNAL1Q9BW62 490 aa13□□□□□ -0.33
RPAIN-214ENST00000574003 UBIAD1Q9Y5Z9 338 aa13□□□□□ -0.33
RPAIN-214ENST00000574003 A0A0C4DFX4 3053 aa13□□□□□ -0.33
RPAIN-214ENST00000574003 PRUNE2Q8WUY3 3088 aa13□□□□□ -0.33
RPAIN-214ENST00000574003 SPDYE3A6NKU9 549 aa12.99□□□□□ -0.33
RPAIN-214ENST00000574003 H3BRB1 525 aa12.99□□□□□ -0.33
RPAIN-214ENST00000574003 TREHO43280 583 aa12.99□□□□□ -0.33
RPAIN-214ENST00000574003 STAM2O75886 525 aa12.99□□□□□ -0.33
RPAIN-214ENST00000574003 SELPP16109 830 aa12.99□□□□□ -0.33
RPAIN-214ENST00000574003 KCNA2P16389 499 aa12.99□□□□□ -0.33
RPAIN-214ENST00000574003 ATP2A2P16615 1042 aaKnown RBP12.99□□□□□ -0.33
RPAIN-214ENST00000574003 RPS6KB1P23443 525 aa12.99□□□□□ -0.33
RPAIN-214ENST00000574003 METAP2P50579 478 aaKnown RBP eCLIP12.99□□□□□ -0.33
RPAIN-214ENST00000574003 NEDD9Q14511 834 aa12.99□□□□□ -0.33
RPAIN-214ENST00000574003 SPRED2Q7Z698 418 aa12.99□□□□□ -0.33
RPAIN-214ENST00000574003 NLRX1Q86UT6 975 aa12.99□□□□□ -0.33
RPAIN-214ENST00000574003 USP38Q8NB14 1042 aa12.99□□□□□ -0.33
RPAIN-214ENST00000574003 CAGE1Q8TC20 777 aa12.99□□□□□ -0.33
RPAIN-214ENST00000574003 AFAP1L1Q8TED9 768 aa12.99□□□□□ -0.33
RPAIN-214ENST00000574003 MTIF3Q9H2K0 278 aaKnown RBP12.99□□□□□ -0.33
RPAIN-214ENST00000574003 RNPEPQ9H4A4 650 aa12.99□□□□□ -0.33
RPAIN-214ENST00000574003 TUT1Q9H6E5 874 aaKnown RBP12.99□□□□□ -0.33
RPAIN-214ENST00000574003 SETD4Q9NVD3 440 aa12.99□□□□□ -0.33
RPAIN-214ENST00000574003 MSRAQ9UJ68 235 aa12.99□□□□□ -0.33
RPAIN-214ENST00000574003 PTPRSQ13332 1948 aa12.99□□□□□ -0.33
RPAIN-214ENST00000574003 CHD9Q3L8U1 2897 aa12.99□□□□□ -0.33
RPAIN-214ENST00000574003 C17orf102A2RUQ5 167 aa12.98□□□□□ -0.33
RPAIN-214ENST00000574003 SMCO2A6NFE2 343 aa12.98□□□□□ -0.33
RPAIN-214ENST00000574003 DTNBO60941 627 aa12.98□□□□□ -0.33
RPAIN-214ENST00000574003 MARK3P27448 753 aa12.98□□□□□ -0.33
RPAIN-214ENST00000574003 RFC2P35250 354 aa12.98□□□□□ -0.33
RPAIN-214ENST00000574003 ADCY7P51828 1080 aa12.98□□□□□ -0.33
RPAIN-214ENST00000574003 PTK7Q13308 1070 aa12.98□□□□□ -0.33
RPAIN-214ENST00000574003 ADGRE1Q14246 886 aa12.98□□□□□ -0.33
RPAIN-214ENST00000574003 RAB30Q15771 203 aa12.98□□□□□ -0.33
RPAIN-214ENST00000574003 JAKMIP3Q5VZ66 844 aa12.98□□□□□ -0.33
RPAIN-214ENST00000574003 PPM1EQ8WY54 764 aa12.98□□□□□ -0.33
RPAIN-214ENST00000574003 PHKBQ93100 1093 aa12.98□□□□□ -0.33
RPAIN-214ENST00000574003 CERS4Q9HA82 394 aa12.98□□□□□ -0.33
RPAIN-214ENST00000574003 NCOA5Q9HCD5 579 aaKnown RBP12.98□□□□□ -0.33
RPAIN-214ENST00000574003 RIC8AQ9NPQ8 531 aa12.98□□□□□ -0.33
RPAIN-214ENST00000574003 CHD7Q9P2D1 2997 aa12.97□□□□□ -0.33
RPAIN-214ENST00000574003 KAT6AQ92794 2004 aa12.97□□□□□ -0.33
RPAIN-214ENST00000574003 TMEM265A0A087WTH1 108 aa12.97□□□□□ -0.33
RPAIN-214ENST00000574003 GSTTP1A0A1W2PQM5 241 aa12.97□□□□□ -0.33
RPAIN-214ENST00000574003 RFXAPO00287 272 aa12.97□□□□□ -0.33
RPAIN-214ENST00000574003 REC8O95072 547 aa12.97□□□□□ -0.33
RPAIN-214ENST00000574003 PFKMP08237 780 aa12.97□□□□□ -0.33
RPAIN-214ENST00000574003 HMGB1P09429 215 aaKnown RBP12.97□□□□□ -0.33
RPAIN-214ENST00000574003 ARP10275 920 aa12.97□□□□□ -0.33
RPAIN-214ENST00000574003 TCF7P36402 384 aaPredicted RBP12.97□□□□□ -0.33
RPAIN-214ENST00000574003 THPOP40225 353 aa12.97□□□□□ -0.33
RPAIN-214ENST00000574003 CCT2P78371 535 aaKnown RBP12.97□□□□□ -0.33
RPAIN-214ENST00000574003 DEFB103AP81534 67 aa12.97□□□□□ -0.33
RPAIN-214ENST00000574003 MTMR1Q13613 665 aa12.97□□□□□ -0.33
RPAIN-214ENST00000574003 PKN1Q16512 942 aa12.97□□□□□ -0.33
RPAIN-214ENST00000574003 XRRA1Q6P2D8 792 aa12.97□□□□□ -0.33
RPAIN-214ENST00000574003 CCDC155Q8N6L0 562 aa12.97□□□□□ -0.33
RPAIN-214ENST00000574003 ATP6V0A1Q93050 837 aa12.97□□□□□ -0.33
RPAIN-214ENST00000574003 GPRASP2Q96D09 838 aa12.97□□□□□ -0.33
RPAIN-214ENST00000574003 ZBTB10Q96DT7 871 aa12.97□□□□□ -0.33
RPAIN-214ENST00000574003 SENP7Q9BQF6 1050 aa12.97□□□□□ -0.33
RPAIN-214ENST00000574003 ANO3Q9BYT9 981 aa12.97□□□□□ -0.33
RPAIN-214ENST00000574003 JADE2Q9NQC1 790 aa12.97□□□□□ -0.33
RPAIN-214ENST00000574003 PRDM6Q9NQX0 595 aa12.97□□□□□ -0.33
RPAIN-214ENST00000574003 BARHL2Q9NY43 387 aa12.97□□□□□ -0.33
RPAIN-214ENST00000574003 CUL9Q8IWT3 2517 aa12.97□□□□□ -0.33
RPAIN-214ENST00000574003 UNC80Q8N2C7 3258 aa12.96□□□□□ -0.33
RPAIN-214ENST00000574003 CA3P07451 260 aa12.96□□□□□ -0.33
RPAIN-214ENST00000574003 CTSHP09668 335 aa12.96□□□□□ -0.33
RPAIN-214ENST00000574003 ACTN1P12814 892 aa12.96□□□□□ -0.33
RPAIN-214ENST00000574003 HOXC8P31273 242 aa12.96□□□□□ -0.33
RPAIN-214ENST00000574003 WDR5P61964 334 aaKnown RBP12.96□□□□□ -0.33
RPAIN-214ENST00000574003 RBL2Q08999 1139 aa12.96□□□□□ -0.33
RPAIN-214ENST00000574003 TOB2Q14106 344 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms