RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 TUT1Q9H6E5 874 aaKnown RBP14.56□□□□□ -0.08
NPLOC4-213ENST00000573519 FAM217BQ9NTX9 383 aaPredicted RBP14.56□□□□□ -0.08
NPLOC4-213ENST00000573519 LAMA2P24043 3122 aaKnown RBP14.55□□□□□ -0.08
NPLOC4-213ENST00000573519 CCDC196A0A1B0GTZ2 297 aa14.55□□□□□ -0.08
NPLOC4-213ENST00000573519 SMCO2A6NFE2 343 aa14.55□□□□□ -0.08
NPLOC4-213ENST00000573519 hCG_1984214I3L0E3 225 aa14.55□□□□□ -0.08
NPLOC4-213ENST00000573519 STXBP3O00186 592 aa14.55□□□□□ -0.08
NPLOC4-213ENST00000573519 SELPP16109 830 aa14.55□□□□□ -0.08
NPLOC4-213ENST00000573519 ITGB5P18084 799 aa14.55□□□□□ -0.08
NPLOC4-213ENST00000573519 RABGGTBP53611 331 aa14.55□□□□□ -0.08
NPLOC4-213ENST00000573519 RCAN1P53805 252 aa14.55□□□□□ -0.08
NPLOC4-213ENST00000573519 FUT2Q10981 343 aa14.55□□□□□ -0.08
NPLOC4-213ENST00000573519 PTK7Q13308 1070 aa14.55□□□□□ -0.08
NPLOC4-213ENST00000573519 MTMR1Q13613 665 aa14.55□□□□□ -0.08
NPLOC4-213ENST00000573519 GRIN2CQ14957 1233 aa14.55□□□□□ -0.08
NPLOC4-213ENST00000573519 TYW1BQ6NUM6 668 aa14.55□□□□□ -0.08
NPLOC4-213ENST00000573519 PPP1R18Q6NYC8 613 aa14.55□□□□□ -0.08
NPLOC4-213ENST00000573519 LRRC8DQ7L1W4 858 aa14.55□□□□□ -0.08
NPLOC4-213ENST00000573519 ZNF713Q8N859 430 aaPredicted RBP14.55□□□□□ -0.08
NPLOC4-213ENST00000573519 GIMAP8Q8ND71 665 aaPredicted RBP14.55□□□□□ -0.08
NPLOC4-213ENST00000573519 GPRASP2Q96D09 838 aa14.55□□□□□ -0.08
NPLOC4-213ENST00000573519 VWCEQ96DN2 955 aa14.55□□□□□ -0.08
NPLOC4-213ENST00000573519 CDHR1Q96JP9 859 aa14.55□□□□□ -0.08
NPLOC4-213ENST00000573519 GPR20Q99678 358 aa14.55□□□□□ -0.08
NPLOC4-213ENST00000573519 USP26Q9BXU7 913 aa14.55□□□□□ -0.08
NPLOC4-213ENST00000573519 RIC8AQ9NPQ8 531 aa14.55□□□□□ -0.08
NPLOC4-213ENST00000573519 TELO2Q9Y4R8 837 aa14.55□□□□□ -0.08
NPLOC4-213ENST00000573519 MYH7BA7E2Y1 1941 aa14.54□□□□□ -0.08
NPLOC4-213ENST00000573519 C17orf102A2RUQ5 167 aa14.54□□□□□ -0.08
NPLOC4-213ENST00000573519 ATP9AO75110 1047 aa14.54□□□□□ -0.08
NPLOC4-213ENST00000573519 SMIM10L2AP0DMW4 78 aa14.54□□□□□ -0.08
NPLOC4-213ENST00000573519 SMIM10L2BP0DMW5 78 aa14.54□□□□□ -0.08
NPLOC4-213ENST00000573519 CKBP12277 381 aa14.54□□□□□ -0.08
NPLOC4-213ENST00000573519 ATP2A2P16615 1042 aaKnown RBP14.54□□□□□ -0.08
NPLOC4-213ENST00000573519 TRIM50Q86XT4 487 aa14.54□□□□□ -0.08
NPLOC4-213ENST00000573519 ATP6V0A1Q93050 837 aa14.54□□□□□ -0.08
NPLOC4-213ENST00000573519 SENP7Q9BQF6 1050 aa14.54□□□□□ -0.08
NPLOC4-213ENST00000573519 NKX2-4Q9H2Z4 354 aa14.54□□□□□ -0.08
NPLOC4-213ENST00000573519 TMEM260Q9NX78 707 aa14.54□□□□□ -0.08
NPLOC4-213ENST00000573519 BARHL2Q9NY43 387 aa14.54□□□□□ -0.08
NPLOC4-213ENST00000573519 ZNF215Q9UL58 517 aaPredicted RBP14.54□□□□□ -0.08
NPLOC4-213ENST00000573519 UBIAD1Q9Y5Z9 338 aa14.54□□□□□ -0.08
NPLOC4-213ENST00000573519 TANC1Q9C0D5 1861 aa14.54□□□□□ -0.08
NPLOC4-213ENST00000573519 PPFIA3O75145 1194 aa14.53□□□□□ -0.08
NPLOC4-213ENST00000573519 KCNA2P16389 499 aa14.53□□□□□ -0.08
NPLOC4-213ENST00000573519 TCF7P36402 384 aaPredicted RBP14.53□□□□□ -0.08
NPLOC4-213ENST00000573519 AKAP17AQ02040 695 aaKnown RBP14.53□□□□□ -0.08
NPLOC4-213ENST00000573519 HIC1Q14526 733 aa14.53□□□□□ -0.08
NPLOC4-213ENST00000573519 ZNF618Q5T7W0 954 aa14.53□□□□□ -0.08
NPLOC4-213ENST00000573519 WNT8BQ93098 351 aa14.53□□□□□ -0.08
NPLOC4-213ENST00000573519 ANO3Q9BYT9 981 aa14.53□□□□□ -0.08
NPLOC4-213ENST00000573519 SLC28A3Q9HAS3 691 aa14.53□□□□□ -0.08
NPLOC4-213ENST00000573519 YBX2Q9Y2T7 364 aaKnown RBP14.53□□□□□ -0.08
NPLOC4-213ENST00000573519 SCN5AQ14524 2016 aa14.53□□□□□ -0.08
NPLOC4-213ENST00000573519 FOSP01100 380 aaPredicted RBP14.52□□□□□ -0.09
NPLOC4-213ENST00000573519 SCG2P13521 617 aa14.52□□□□□ -0.09
NPLOC4-213ENST00000573519 MYOGP15173 224 aa14.52□□□□□ -0.09
NPLOC4-213ENST00000573519 ZNF76P36508 570 aa14.52□□□□□ -0.09
NPLOC4-213ENST00000573519 THPOP40225 353 aa14.52□□□□□ -0.09
NPLOC4-213ENST00000573519 KCNJ6P48051 423 aa14.52□□□□□ -0.09
NPLOC4-213ENST00000573519 CCT2P78371 535 aaKnown RBP14.52□□□□□ -0.09
NPLOC4-213ENST00000573519 PFKFB3Q16875 520 aaPredicted RBP14.52□□□□□ -0.09
NPLOC4-213ENST00000573519 JAKMIP3Q5VZ66 844 aa14.52□□□□□ -0.09
NPLOC4-213ENST00000573519 RUFY3Q7L099 469 aa14.52□□□□□ -0.09
NPLOC4-213ENST00000573519 MAFAQ8NHW3 353 aaPredicted RBP14.52□□□□□ -0.09
NPLOC4-213ENST00000573519 PHKBQ93100 1093 aa14.52□□□□□ -0.09
NPLOC4-213ENST00000573519 GLT8D2Q9H1C3 349 aa14.52□□□□□ -0.09
NPLOC4-213ENST00000573519 RNPEPQ9H4A4 650 aa14.52□□□□□ -0.09
NPLOC4-213ENST00000573519 JADE2Q9NQC1 790 aa14.52□□□□□ -0.09
NPLOC4-213ENST00000573519 SETD4Q9NVD3 440 aa14.52□□□□□ -0.09
NPLOC4-213ENST00000573519 DOCK5Q9H7D0 1870 aa14.51□□□□□ -0.09
NPLOC4-213ENST00000573519 TREHO43280 583 aa14.51□□□□□ -0.09
NPLOC4-213ENST00000573519 NBNO60934 754 aa14.51□□□□□ -0.09
NPLOC4-213ENST00000573519 PARNO95453 639 aaKnown RBP14.51□□□□□ -0.09
NPLOC4-213ENST00000573519 GNAT1P11488 350 aa14.51□□□□□ -0.09
NPLOC4-213ENST00000573519 MARK3P27448 753 aa14.51□□□□□ -0.09
NPLOC4-213ENST00000573519 ARHGAP4P98171 946 aa14.51□□□□□ -0.09
NPLOC4-213ENST00000573519 RBL2Q08999 1139 aa14.51□□□□□ -0.09
NPLOC4-213ENST00000573519 AP3B2Q13367 1082 aa14.51□□□□□ -0.09
NPLOC4-213ENST00000573519 TRIM71Q2Q1W2 868 aaKnown RBP14.51□□□□□ -0.09
NPLOC4-213ENST00000573519 PPP2R2DQ66LE6 453 aa14.51□□□□□ -0.09
NPLOC4-213ENST00000573519 SERINC5Q86VE9 423 aa14.51□□□□□ -0.09
NPLOC4-213ENST00000573519 CYP2W1Q8TAV3 490 aa14.51□□□□□ -0.09
NPLOC4-213ENST00000573519 SEPT1Q8WYJ6 367 aa14.51□□□□□ -0.09
NPLOC4-213ENST00000573519 GLG1Q92896 1179 aa14.51□□□□□ -0.09
NPLOC4-213ENST00000573519 SLC9A7Q96T83 725 aa14.51□□□□□ -0.09
NPLOC4-213ENST00000573519 GAS2L1Q99501 681 aaPredicted RBP14.51□□□□□ -0.09
NPLOC4-213ENST00000573519 MXRA8Q9BRK3 442 aa14.51□□□□□ -0.09
NPLOC4-213ENST00000573519 SLC26A6Q9BXS9 759 aa14.51□□□□□ -0.09
NPLOC4-213ENST00000573519 PRDM12Q9H4Q4 367 aa14.51□□□□□ -0.09
NPLOC4-213ENST00000573519 C6orf50Q9HD87 102 aa14.51□□□□□ -0.09
NPLOC4-213ENST00000573519 KCNH7Q9NS40 1196 aa14.51□□□□□ -0.09
NPLOC4-213ENST00000573519 PCDHA11Q9Y5I1 949 aa14.51□□□□□ -0.09
NPLOC4-213ENST00000573519 CYP46A1Q9Y6A2 500 aa14.51□□□□□ -0.09
NPLOC4-213ENST00000573519 NID2Q14112 1375 aa14.5□□□□□ -0.09
NPLOC4-213ENST00000573519 RBAK-RBAKDNI3L0D1 243 aa14.5□□□□□ -0.09
NPLOC4-213ENST00000573519 MAFGO15525 162 aa14.5□□□□□ -0.09
NPLOC4-213ENST00000573519 PRPF3O43395 683 aaKnown RBP14.5□□□□□ -0.09
NPLOC4-213ENST00000573519 EPB41L2O43491 1005 aaKnown RBP14.5□□□□□ -0.09
NPLOC4-213ENST00000573519 BAIAP3O94812 1187 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms