RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 ASB14A6NK59 587 aa15.37■□□□□ 0.05
CCDC40-209ENST00000573474 DHX15O43143 795 aaKnown RBP15.37■□□□□ 0.05
CCDC40-209ENST00000573474 RGS20O76081 388 aa15.37■□□□□ 0.05
CCDC40-209ENST00000573474 CCDC192P0DO97 292 aa15.37■□□□□ 0.05
CCDC40-209ENST00000573474 ADORA2AP29274 412 aa15.37■□□□□ 0.05
CCDC40-209ENST00000573474 GRB10Q13322 594 aa15.37■□□□□ 0.05
CCDC40-209ENST00000573474 POSTNQ15063 836 aa15.37■□□□□ 0.05
CCDC40-209ENST00000573474 ZNF792Q3KQV3 632 aa15.37■□□□□ 0.05
CCDC40-209ENST00000573474 TMEM119Q4V9L6 283 aa15.37■□□□□ 0.05
CCDC40-209ENST00000573474 B3GNT9Q6UX72 402 aa15.37■□□□□ 0.05
CCDC40-209ENST00000573474 FGD4Q96M96 766 aa15.37■□□□□ 0.05
CCDC40-209ENST00000573474 PNMA5Q96PV4 448 aa15.37■□□□□ 0.05
CCDC40-209ENST00000573474 PLIN2Q99541 437 aa15.37■□□□□ 0.05
CCDC40-209ENST00000573474 NUDT12Q9BQG2 462 aa15.37■□□□□ 0.05
CCDC40-209ENST00000573474 NT5C3AQ9H0P0 336 aa15.37■□□□□ 0.05
CCDC40-209ENST00000573474 STK17AQ9UEE5 414 aa15.37■□□□□ 0.05
CCDC40-209ENST00000573474 SPATA31C2B4DYI2 1134 aa15.36■□□□□ 0.05
CCDC40-209ENST00000573474 EML1O00423 815 aa15.36■□□□□ 0.05
CCDC40-209ENST00000573474 ICAM3P32942 547 aa15.36■□□□□ 0.05
CCDC40-209ENST00000573474 SEMA3FQ13275 785 aa15.36■□□□□ 0.05
CCDC40-209ENST00000573474 CRHR2Q13324 411 aa15.36■□□□□ 0.05
CCDC40-209ENST00000573474 ITGB3BPQ13352 177 aaPredicted RBP15.36■□□□□ 0.05
CCDC40-209ENST00000573474 PNOCQ13519 176 aa15.36■□□□□ 0.05
CCDC40-209ENST00000573474 GRB14Q14449 540 aa15.36■□□□□ 0.05
CCDC40-209ENST00000573474 EPHA7Q15375 998 aa15.36■□□□□ 0.05
CCDC40-209ENST00000573474 NAALADL2Q58DX5 795 aa15.36■□□□□ 0.05
CCDC40-209ENST00000573474 MORC4Q8TE76 937 aa15.36■□□□□ 0.05
CCDC40-209ENST00000573474 FUCA2Q9BTY2 467 aa15.36■□□□□ 0.05
CCDC40-209ENST00000573474 POLR3CQ9BUI4 534 aaPredicted RBP15.36■□□□□ 0.05
CCDC40-209ENST00000573474 UNC45AQ9H3U1 944 aa15.36■□□□□ 0.05
CCDC40-209ENST00000573474 TSPY26PQ9H489 355 aa15.36■□□□□ 0.05
CCDC40-209ENST00000573474 PKD2L1Q9P0L9 805 aa15.36■□□□□ 0.05
CCDC40-209ENST00000573474 LCTP09848 1927 aa15.36■□□□□ 0.05
CCDC40-209ENST00000573474 FOXN1O15353 648 aa15.35■□□□□ 0.05
CCDC40-209ENST00000573474 AOC2O75106 756 aa15.35■□□□□ 0.05
CCDC40-209ENST00000573474 ATP9AO75110 1047 aa15.35■□□□□ 0.05
CCDC40-209ENST00000573474 COBLO75128 1261 aa15.35■□□□□ 0.05
CCDC40-209ENST00000573474 SMC2O95347 1197 aa15.35■□□□□ 0.05
CCDC40-209ENST00000573474 RPA1P27694 616 aa15.35■□□□□ 0.05
CCDC40-209ENST00000573474 AFMP43652 599 aa15.35■□□□□ 0.05
CCDC40-209ENST00000573474 TYRO3Q06418 890 aa15.35■□□□□ 0.05
CCDC40-209ENST00000573474 ZNF467Q7Z7K2 595 aaPredicted RBP15.35■□□□□ 0.05
CCDC40-209ENST00000573474 DPP9Q86TI2 863 aa15.35■□□□□ 0.05
CCDC40-209ENST00000573474 GRAMD1CQ8IYS0 662 aa15.35■□□□□ 0.05
CCDC40-209ENST00000573474 KCTD17Q8N5Z5 321 aa15.35■□□□□ 0.05
CCDC40-209ENST00000573474 EIF2AK1Q9BQI3 630 aaKnown RBP15.35■□□□□ 0.05
CCDC40-209ENST00000573474 TUFT1Q9NNX1 390 aa15.35■□□□□ 0.05
CCDC40-209ENST00000573474 SLC5A4Q9NY91 659 aa15.35■□□□□ 0.05
CCDC40-209ENST00000573474 TCEAL9Q9UHQ7 104 aa15.35■□□□□ 0.05
CCDC40-209ENST00000573474 TUBE1Q9UJT0 475 aa15.35■□□□□ 0.05
CCDC40-209ENST00000573474 DIS3Q9Y2L1 958 aaKnown RBP15.35■□□□□ 0.05
CCDC40-209ENST00000573474 NFASCO94856 1347 aa15.35■□□□□ 0.05
CCDC40-209ENST00000573474 DDX39AO00148 427 aaKnown RBP15.34■□□□□ 0.05
CCDC40-209ENST00000573474 CHMP2AO43633 222 aa15.34■□□□□ 0.05
CCDC40-209ENST00000573474 GTPBP6O43824 516 aaPredicted RBP15.34■□□□□ 0.05
CCDC40-209ENST00000573474 MED24O75448 989 aa15.34■□□□□ 0.05
CCDC40-209ENST00000573474 MYL1P05976 194 aa15.34■□□□□ 0.05
CCDC40-209ENST00000573474 SPATA31C1P0DKV0 1188 aa15.34■□□□□ 0.05
CCDC40-209ENST00000573474 KCNA2P16389 499 aa15.34■□□□□ 0.05
CCDC40-209ENST00000573474 MUTP22033 750 aa15.34■□□□□ 0.05
CCDC40-209ENST00000573474 AMPD3Q01432 767 aa15.34■□□□□ 0.05
CCDC40-209ENST00000573474 KRT76Q01546 638 aa15.34■□□□□ 0.05
CCDC40-209ENST00000573474 ECM1Q16610 540 aa15.34■□□□□ 0.05
CCDC40-209ENST00000573474 KCNV1Q6PIU1 500 aa15.34■□□□□ 0.05
CCDC40-209ENST00000573474 SEPT14Q6ZU15 432 aa15.34■□□□□ 0.05
CCDC40-209ENST00000573474 MIER3Q7Z3K6 550 aa15.34■□□□□ 0.05
CCDC40-209ENST00000573474 GAS2L3Q86XJ1 694 aa15.34■□□□□ 0.05
CCDC40-209ENST00000573474 CATSPER3Q86XQ3 398 aa15.34■□□□□ 0.05
CCDC40-209ENST00000573474 NEK9Q8TD19 979 aa15.34■□□□□ 0.05
CCDC40-209ENST00000573474 LRRC15Q8TF66 581 aa15.34■□□□□ 0.05
CCDC40-209ENST00000573474 RAD54LQ92698 747 aa15.34■□□□□ 0.05
CCDC40-209ENST00000573474 ERCC4Q92889 916 aaPredicted RBP15.34■□□□□ 0.05
CCDC40-209ENST00000573474 HSD17B14Q9BPX1 270 aa15.34■□□□□ 0.05
CCDC40-209ENST00000573474 SENP7Q9BQF6 1050 aa15.34■□□□□ 0.05
CCDC40-209ENST00000573474 KBTBD4Q9NVX7 518 aa15.34■□□□□ 0.05
CCDC40-209ENST00000573474 KIAA1024Q9UPX6 916 aa15.34■□□□□ 0.05
CCDC40-209ENST00000573474 PCDHA5Q9Y5H7 936 aa15.34■□□□□ 0.05
CCDC40-209ENST00000573474 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.33■□□□□ 0.04
CCDC40-209ENST00000573474 PRR29P0C7W0 189 aa15.33■□□□□ 0.04
CCDC40-209ENST00000573474 TGFB3P10600 412 aa15.33■□□□□ 0.04
CCDC40-209ENST00000573474 SFNP31947 248 aa15.33■□□□□ 0.04
CCDC40-209ENST00000573474 JAK3P52333 1124 aa15.33■□□□□ 0.04
CCDC40-209ENST00000573474 MORN1Q5T089 497 aa15.33■□□□□ 0.04
CCDC40-209ENST00000573474 NT5DC1Q5TFE4 455 aa15.33■□□□□ 0.04
CCDC40-209ENST00000573474 ZNF746Q6NUN9 644 aaPredicted RBP15.33■□□□□ 0.04
CCDC40-209ENST00000573474 SV2BQ7L1I2 683 aa15.33■□□□□ 0.04
CCDC40-209ENST00000573474 GIMAP8Q8ND71 665 aaPredicted RBP15.33■□□□□ 0.04
CCDC40-209ENST00000573474 RDM1Q8NG50 284 aa15.33■□□□□ 0.04
CCDC40-209ENST00000573474 SPATA20Q8TB22 786 aa15.33■□□□□ 0.04
CCDC40-209ENST00000573474 LARP4BQ92615 738 aaKnown RBP15.33■□□□□ 0.04
CCDC40-209ENST00000573474 SMARCE1Q969G3 411 aa15.33■□□□□ 0.04
CCDC40-209ENST00000573474 DYDC2Q96IM9 177 aa15.33■□□□□ 0.04
CCDC40-209ENST00000573474 MTRQ99707 1265 aa15.33■□□□□ 0.04
CCDC40-209ENST00000573474 LRRC27Q9C0I9 530 aa15.33■□□□□ 0.04
CCDC40-209ENST00000573474 BLOC1S4Q9NUP1 217 aa15.33■□□□□ 0.04
CCDC40-209ENST00000573474 ANO10Q9NW15 660 aa15.33■□□□□ 0.04
CCDC40-209ENST00000573474 POTEB3A0JP26 581 aa15.32■□□□□ 0.04
CCDC40-209ENST00000573474 GOLGA6L3A6NEY3 463 aa15.32■□□□□ 0.04
CCDC40-209ENST00000573474 SLITRK3O94933 977 aa15.32■□□□□ 0.04
CCDC40-209ENST00000573474 MAP2K2P36507 400 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms