RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 POTEFA5A3E0 1075 aa12.4□□□□□ -0.42
RPAIN-212ENST00000573126 POTEIP0CG38 1075 aa12.4□□□□□ -0.42
RPAIN-212ENST00000573126 EEF2P13639 858 aaKnown RBP12.4□□□□□ -0.42
RPAIN-212ENST00000573126 TAL1P17542 331 aaPredicted RBP12.4□□□□□ -0.42
RPAIN-212ENST00000573126 NAP1L1P55209 391 aaKnown RBP12.4□□□□□ -0.42
RPAIN-212ENST00000573126 POLR2FP61218 127 aaKnown RBP12.4□□□□□ -0.42
RPAIN-212ENST00000573126 ZSCAN26Q16670 478 aa12.4□□□□□ -0.42
RPAIN-212ENST00000573126 MAP9Q49MG5 647 aa12.4□□□□□ -0.42
RPAIN-212ENST00000573126 HGSNATQ68CP4 663 aa12.4□□□□□ -0.42
RPAIN-212ENST00000573126 POTEGQ6S5H5 508 aa12.4□□□□□ -0.42
RPAIN-212ENST00000573126 POTEEQ6S8J3 1075 aa12.4□□□□□ -0.42
RPAIN-212ENST00000573126 MSL3Q8N5Y2 521 aaKnown RBP12.4□□□□□ -0.42
RPAIN-212ENST00000573126 MTMR8Q96EF0 704 aa12.4□□□□□ -0.42
RPAIN-212ENST00000573126 ALS2CR12Q96Q35 445 aa12.4□□□□□ -0.42
RPAIN-212ENST00000573126 KDM3AQ9Y4C1 1321 aa12.4□□□□□ -0.42
RPAIN-212ENST00000573126 TLR2O60603 784 aa12.4□□□□□ -0.42
RPAIN-212ENST00000573126 MED24O75448 989 aa12.4□□□□□ -0.42
RPAIN-212ENST00000573126 NOL4O94818 638 aa12.4□□□□□ -0.42
RPAIN-212ENST00000573126 LCA5LO95447 670 aa12.4□□□□□ -0.42
RPAIN-212ENST00000573126 KRT18P05783 430 aaKnown RBP12.4□□□□□ -0.42
RPAIN-212ENST00000573126 CAPN2P17655 700 aa12.4□□□□□ -0.42
RPAIN-212ENST00000573126 DNA2P51530 1060 aa12.4□□□□□ -0.42
RPAIN-212ENST00000573126 CDC37Q16543 378 aaPredicted RBP12.4□□□□□ -0.42
RPAIN-212ENST00000573126 FAM83BQ5T0W9 1011 aa12.4□□□□□ -0.42
RPAIN-212ENST00000573126 FAM71BQ8TC56 605 aa12.4□□□□□ -0.42
RPAIN-212ENST00000573126 SCFD1Q8WVM8 642 aa12.4□□□□□ -0.42
RPAIN-212ENST00000573126 OSBPL9Q96SU4 736 aa12.4□□□□□ -0.42
RPAIN-212ENST00000573126 LSM14BQ9BX40 385 aaKnown RBP12.4□□□□□ -0.42
RPAIN-212ENST00000573126 ANO3Q9BYT9 981 aa12.4□□□□□ -0.42
RPAIN-212ENST00000573126 DDTLA6NHG4 134 aaPredicted RBP12.39□□□□□ -0.43
RPAIN-212ENST00000573126 MEIS1O00470 390 aa12.39□□□□□ -0.43
RPAIN-212ENST00000573126 TRIM37O94972 964 aa12.39□□□□□ -0.43
RPAIN-212ENST00000573126 CYP11B2P19099 503 aa12.39□□□□□ -0.43
RPAIN-212ENST00000573126 MCM3P25205 808 aa12.39□□□□□ -0.43
RPAIN-212ENST00000573126 ASTE1Q2TB18 679 aaPredicted RBP12.39□□□□□ -0.43
RPAIN-212ENST00000573126 PRR16Q569H4 304 aa12.39□□□□□ -0.43
RPAIN-212ENST00000573126 CCDC65Q8IXS2 484 aa12.39□□□□□ -0.43
RPAIN-212ENST00000573126 P2RX7Q99572 595 aaKnown RBP12.39□□□□□ -0.43
RPAIN-212ENST00000573126 LRRC1Q9BTT6 524 aa12.39□□□□□ -0.43
RPAIN-212ENST00000573126 ACBD3Q9H3P7 528 aa12.39□□□□□ -0.43
RPAIN-212ENST00000573126 KCNMB3Q9NPA1 279 aa12.39□□□□□ -0.43
RPAIN-212ENST00000573126 DMGDHQ9UI17 866 aaKnown RBP12.39□□□□□ -0.43
RPAIN-212ENST00000573126 HPCAL4Q9UM19 191 aa12.39□□□□□ -0.43
RPAIN-212ENST00000573126 PCDHA2Q9Y5H9 948 aa12.39□□□□□ -0.43
RPAIN-212ENST00000573126 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.39□□□□□ -0.43
RPAIN-212ENST00000573126 MYO3BQ8WXR4 1341 aa12.39□□□□□ -0.43
RPAIN-212ENST00000573126 MYH7BA7E2Y1 1941 aa12.39□□□□□ -0.43
RPAIN-212ENST00000573126 RNF40O75150 1001 aa12.39□□□□□ -0.43
RPAIN-212ENST00000573126 CRKP46108 304 aa12.39□□□□□ -0.43
RPAIN-212ENST00000573126 RBM5P52756 815 aaKnown RBP eCLIP12.39□□□□□ -0.43
RPAIN-212ENST00000573126 SLC7A5Q01650 507 aa12.39□□□□□ -0.43
RPAIN-212ENST00000573126 USH1GQ495M9 461 aa12.39□□□□□ -0.43
RPAIN-212ENST00000573126 IQCEQ6IPM2 695 aa12.39□□□□□ -0.43
RPAIN-212ENST00000573126 SPATA4Q8NEY3 305 aa12.39□□□□□ -0.43
RPAIN-212ENST00000573126 SELENOOQ9BVL4 669 aa12.39□□□□□ -0.43
RPAIN-212ENST00000573126 FAM204AQ9H8W3 233 aa12.39□□□□□ -0.43
RPAIN-212ENST00000573126 EMILIN3Q9NT22 766 aa12.39□□□□□ -0.43
RPAIN-212ENST00000573126 UBR3Q6ZT12 1888 aa12.39□□□□□ -0.43
RPAIN-212ENST00000573126 AFF2P51816 1311 aa12.39□□□□□ -0.43
RPAIN-212ENST00000573126 CASP5P51878 434 aa12.39□□□□□ -0.43
RPAIN-212ENST00000573126 PSMC6P62333 389 aa12.39□□□□□ -0.43
RPAIN-212ENST00000573126 SEPT2Q15019 361 aa12.39□□□□□ -0.43
RPAIN-212ENST00000573126 SLC9C1Q4G0N8 1177 aa12.39□□□□□ -0.43
RPAIN-212ENST00000573126 HYIQ5T013 277 aa12.39□□□□□ -0.43
RPAIN-212ENST00000573126 SLFN13Q68D06 897 aa12.39□□□□□ -0.43
RPAIN-212ENST00000573126 HHIPL2Q6UWX4 724 aa12.39□□□□□ -0.43
RPAIN-212ENST00000573126 CCNI2Q6ZMN8 369 aaPredicted RBP12.39□□□□□ -0.43
RPAIN-212ENST00000573126 POLD4Q9HCU8 107 aa12.39□□□□□ -0.43
RPAIN-212ENST00000573126 MED4Q9NPJ6 270 aa12.39□□□□□ -0.43
RPAIN-212ENST00000573126 PSD3Q9NYI0 1048 aa12.39□□□□□ -0.43
RPAIN-212ENST00000573126 CEP72Q9P209 647 aa12.39□□□□□ -0.43
RPAIN-212ENST00000573126 ADAMTSL1Q8N6G6 1762 aa12.38□□□□□ -0.43
RPAIN-212ENST00000573126 A0A0U1RQG5 324 aaPredicted RBP12.38□□□□□ -0.43
RPAIN-212ENST00000573126 MEIS2O14770 477 aa12.38□□□□□ -0.43
RPAIN-212ENST00000573126 GDF11O95390 407 aa12.38□□□□□ -0.43
RPAIN-212ENST00000573126 SYF2O95926 243 aaKnown RBP12.38□□□□□ -0.43
RPAIN-212ENST00000573126 ARHGAP4P98171 946 aa12.38□□□□□ -0.43
RPAIN-212ENST00000573126 IKQ13123 557 aaPredicted RBP12.38□□□□□ -0.43
RPAIN-212ENST00000573126 PABPC4Q13310 644 aaKnown RBP eCLIP12.38□□□□□ -0.431e-6■■■■□ 26.3
RPAIN-212ENST00000573126 ADAM9Q13443 819 aa12.38□□□□□ -0.43
RPAIN-212ENST00000573126 RAPGEF1Q13905 1077 aa12.38□□□□□ -0.43
RPAIN-212ENST00000573126 CERKLQ49MI3 558 aaPredicted RBP12.38□□□□□ -0.43
RPAIN-212ENST00000573126 ARSHQ5FYA8 562 aa12.38□□□□□ -0.43
RPAIN-212ENST00000573126 CCDC181Q5TID7 509 aa12.38□□□□□ -0.43
RPAIN-212ENST00000573126 SFMBT2Q5VUG0 894 aa12.38□□□□□ -0.43
RPAIN-212ENST00000573126 TRIM59Q8IWR1 403 aa12.38□□□□□ -0.43
RPAIN-212ENST00000573126 TLR10Q9BXR5 811 aa12.38□□□□□ -0.43
RPAIN-212ENST00000573126 KCTD10Q9H3F6 313 aa12.38□□□□□ -0.43
RPAIN-212ENST00000573126 HYOU1Q9Y4L1 999 aa12.38□□□□□ -0.43
RPAIN-212ENST00000573126 MYH10P35580 1976 aa12.38□□□□□ -0.43
RPAIN-212ENST00000573126 FOCADQ5VW36 1801 aa12.38□□□□□ -0.43
RPAIN-212ENST00000573126 SSU72P8A0A1W2PR75 194 aa12.38□□□□□ -0.43
RPAIN-212ENST00000573126 EPS15P42566 896 aa12.38□□□□□ -0.43
RPAIN-212ENST00000573126 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.38□□□□□ -0.43
RPAIN-212ENST00000573126 CATSPER3Q86XQ3 398 aa12.38□□□□□ -0.43
RPAIN-212ENST00000573126 FAM133AQ8N9E0 248 aa12.38□□□□□ -0.43
RPAIN-212ENST00000573126 CCDC17Q96LX7 622 aa12.38□□□□□ -0.43
RPAIN-212ENST00000573126 NOX5Q96PH1 765 aa12.38□□□□□ -0.43
RPAIN-212ENST00000573126 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.38□□□□□ -0.43
RPAIN-212ENST00000573126 TRIM34Q9BYJ4 488 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms