RNA–Protein interactions for RNA: ENST00000573095.1

HCFC1R1-204, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 3

Gene HCFC1R1, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-204ENST00000573095 SRBD1Q8N5C6 995 aaKnown RBP22.29■■□□□ 1.16
HCFC1R1-204ENST00000573095 TUT1Q9H6E5 874 aaKnown RBP22.29■■□□□ 1.16
HCFC1R1-204ENST00000573095 TLL1O43897 1013 aa22.28■■□□□ 1.16
HCFC1R1-204ENST00000573095 EFCAB14O75071 495 aa22.28■■□□□ 1.16
HCFC1R1-204ENST00000573095 MBTPS1Q14703 1052 aa22.28■■□□□ 1.16
HCFC1R1-204ENST00000573095 BCAS3Q9H6U6 928 aa22.28■■□□□ 1.16
HCFC1R1-204ENST00000573095 ANO2Q9NQ90 1003 aa22.28■■□□□ 1.16
HCFC1R1-204ENST00000573095 EMSYQ7Z589 1322 aa22.28■■□□□ 1.16
HCFC1R1-204ENST00000573095 SIP14410 1827 aa22.27■■□□□ 1.16
HCFC1R1-204ENST00000573095 C17orf102A2RUQ5 167 aa22.27■■□□□ 1.16
HCFC1R1-204ENST00000573095 EPOPA6NHQ4 379 aa22.27■■□□□ 1.16
HCFC1R1-204ENST00000573095 RXRAP19793 462 aa22.27■■□□□ 1.16
HCFC1R1-204ENST00000573095 DEFB103AP81534 67 aa22.27■■□□□ 1.16
HCFC1R1-204ENST00000573095 TCTN1Q2MV58 587 aa22.27■■□□□ 1.16
HCFC1R1-204ENST00000573095 BMP2KLQ5H9B9 411 aa22.27■■□□□ 1.16
HCFC1R1-204ENST00000573095 GPR20Q99678 358 aa22.27■■□□□ 1.16
HCFC1R1-204ENST00000573095 SENP7Q9BQF6 1050 aa22.27■■□□□ 1.16
HCFC1R1-204ENST00000573095 USP26Q9BXU7 913 aa22.27■■□□□ 1.16
HCFC1R1-204ENST00000573095 CERS4Q9HA82 394 aa22.27■■□□□ 1.16
HCFC1R1-204ENST00000573095 RTEL1Q9NZ71 1219 aa22.27■■□□□ 1.16
HCFC1R1-204ENST00000573095 GTPBP6O43824 516 aaPredicted RBP22.26■■□□□ 1.15
HCFC1R1-204ENST00000573095 SMIM10L2AP0DMW4 78 aa22.26■■□□□ 1.15
HCFC1R1-204ENST00000573095 SMIM10L2BP0DMW5 78 aa22.26■■□□□ 1.15
HCFC1R1-204ENST00000573095 CYFIP1Q7L576 1253 aa22.26■■□□□ 1.15
HCFC1R1-204ENST00000573095 SGMS1Q86VZ5 419 aa22.26■■□□□ 1.15
HCFC1R1-204ENST00000573095 ATP6V0A1Q93050 837 aa22.26■■□□□ 1.15
HCFC1R1-204ENST00000573095 ASB2Q96Q27 587 aa22.26■■□□□ 1.15
HCFC1R1-204ENST00000573095 SLC12A7Q9Y666 1083 aa22.26■■□□□ 1.15
HCFC1R1-204ENST00000573095 PRRC2BQ5JSZ5 2229 aaKnown RBP22.25■■□□□ 1.15
HCFC1R1-204ENST00000573095 CAND2O75155 1236 aa22.25■■□□□ 1.15
HCFC1R1-204ENST00000573095 LGR5O75473 907 aa22.25■■□□□ 1.15
HCFC1R1-204ENST00000573095 GJB5O95377 273 aa22.25■■□□□ 1.15
HCFC1R1-204ENST00000573095 THPOP40225 353 aa22.25■■□□□ 1.15
HCFC1R1-204ENST00000573095 MRPS5P82675 430 aaKnown RBP22.25■■□□□ 1.15
HCFC1R1-204ENST00000573095 IKBKEQ14164 716 aa22.25■■□□□ 1.15
HCFC1R1-204ENST00000573095 TMTC3Q6ZXV5 915 aa22.25■■□□□ 1.15
HCFC1R1-204ENST00000573095 NLRX1Q86UT6 975 aa22.25■■□□□ 1.15
HCFC1R1-204ENST00000573095 CMTR1Q8N1G2 835 aaKnown RBP22.25■■□□□ 1.15
HCFC1R1-204ENST00000573095 MICALL1Q8N3F8 863 aa22.25■■□□□ 1.15
HCFC1R1-204ENST00000573095 ARNTL2Q8WYA1 636 aa22.25■■□□□ 1.15
HCFC1R1-204ENST00000573095 TSPYL2Q9H2G4 693 aaPredicted RBP22.25■■□□□ 1.15
HCFC1R1-204ENST00000573095 ZNF215Q9UL58 517 aaPredicted RBP22.25■■□□□ 1.15
HCFC1R1-204ENST00000573095 MTCH2Q9Y6C9 303 aa22.25■■□□□ 1.15
HCFC1R1-204ENST00000573095 TTC28Q96AY4 2481 aa22.24■■□□□ 1.15
HCFC1R1-204ENST00000573095 TRANK1O15050 2925 aa22.24■■□□□ 1.15
HCFC1R1-204ENST00000573095 LCHNA4D1U4 455 aa22.24■■□□□ 1.15
HCFC1R1-204ENST00000573095 RFXAPO00287 272 aa22.24■■□□□ 1.15
HCFC1R1-204ENST00000573095 MKRN4PQ13434 485 aaPredicted RBP22.24■■□□□ 1.15
HCFC1R1-204ENST00000573095 TMCO2Q7Z6W1 182 aaPredicted RBP22.24■■□□□ 1.15
HCFC1R1-204ENST00000573095 TRIM50Q86XT4 487 aa22.24■■□□□ 1.15
HCFC1R1-204ENST00000573095 GPRASP2Q96D09 838 aa22.24■■□□□ 1.15
HCFC1R1-204ENST00000573095 RNPEPQ9H4A4 650 aa22.24■■□□□ 1.15
HCFC1R1-204ENST00000573095 PSTPIP2Q9H939 334 aa22.24■■□□□ 1.15
HCFC1R1-204ENST00000573095 RSPH10B2B2RC85 870 aa22.23■■□□□ 1.15
HCFC1R1-204ENST00000573095 TREHO43280 583 aa22.23■■□□□ 1.15
HCFC1R1-204ENST00000573095 RSPH10BP0C881 870 aa22.23■■□□□ 1.15
HCFC1R1-204ENST00000573095 RNF20Q5VTR2 975 aa22.23■■□□□ 1.15
HCFC1R1-204ENST00000573095 MICU3Q86XE3 530 aa22.23■■□□□ 1.15
HCFC1R1-204ENST00000573095 FANCBQ8NB91 859 aa22.23■■□□□ 1.15
HCFC1R1-204ENST00000573095 GIMAP8Q8ND71 665 aaPredicted RBP22.23■■□□□ 1.15
HCFC1R1-204ENST00000573095 CDHR1Q96JP9 859 aa22.23■■□□□ 1.15
HCFC1R1-204ENST00000573095 ZBED2Q9BTP6 218 aa22.23■■□□□ 1.15
HCFC1R1-204ENST00000573095 LRRC2Q9BYS8 371 aa22.23■■□□□ 1.15
HCFC1R1-204ENST00000573095 KAT6AQ92794 2004 aa22.23■■□□□ 1.15
HCFC1R1-204ENST00000573095 GNAT1P11488 350 aa22.22■■□□□ 1.15
HCFC1R1-204ENST00000573095 CENPQQ7L2Z9 268 aaPredicted RBP22.22■■□□□ 1.15
HCFC1R1-204ENST00000573095 SPRED2Q7Z698 418 aa22.22■■□□□ 1.15
HCFC1R1-204ENST00000573095 RAB11FIP4Q86YS3 637 aa22.22■■□□□ 1.15
HCFC1R1-204ENST00000573095 RAD9AQ99638 391 aa22.22■■□□□ 1.15
HCFC1R1-204ENST00000573095 TELO2Q9Y4R8 837 aa22.22■■□□□ 1.15
HCFC1R1-204ENST00000573095 COL4A6Q14031 1691 aa22.21■■□□□ 1.15
HCFC1R1-204ENST00000573095 REV3LO60673 3130 aa22.21■■□□□ 1.15
HCFC1R1-204ENST00000573095 KCNA2P16389 499 aa22.21■■□□□ 1.15
HCFC1R1-204ENST00000573095 GRB10Q13322 594 aa22.21■■□□□ 1.15
HCFC1R1-204ENST00000573095 PLEKHG4Q58EX7 1191 aa22.21■■□□□ 1.15
HCFC1R1-204ENST00000573095 DBF4BQ8NFT6 615 aa22.21■■□□□ 1.15
HCFC1R1-204ENST00000573095 CNTNAP5Q8WYK1 1306 aa22.21■■□□□ 1.15
HCFC1R1-204ENST00000573095 hCG_1642624A0A1W2PR95 340 aa22.2■■□□□ 1.14
HCFC1R1-204ENST00000573095 SPDYE3A6NKU9 549 aa22.2■■□□□ 1.14
HCFC1R1-204ENST00000573095 TNFRSF10AO00220 468 aa22.2■■□□□ 1.14
HCFC1R1-204ENST00000573095 LPXNO60711 386 aa22.2■■□□□ 1.14
HCFC1R1-204ENST00000573095 ITGB5P18084 799 aa22.2■■□□□ 1.14
HCFC1R1-204ENST00000573095 ADAM17P78536 824 aa22.2■■□□□ 1.14
HCFC1R1-204ENST00000573095 SP4Q02446 784 aa22.2■■□□□ 1.14
HCFC1R1-204ENST00000573095 UBE2SQ16763 222 aa22.2■■□□□ 1.14
HCFC1R1-204ENST00000573095 APOA5Q6Q788 366 aa22.2■■□□□ 1.14
HCFC1R1-204ENST00000573095 ADAMTS19Q8TE59 1207 aa22.2■■□□□ 1.14
HCFC1R1-204ENST00000573095 LMBR1Q8WVP7 490 aa22.2■■□□□ 1.14
HCFC1R1-204ENST00000573095 NEK1Q96PY6 1258 aa22.2■■□□□ 1.14
HCFC1R1-204ENST00000573095 SETD4Q9NVD3 440 aa22.2■■□□□ 1.14
HCFC1R1-204ENST00000573095 RBM28Q9NW13 759 aaKnown RBP22.2■■□□□ 1.14
HCFC1R1-204ENST00000573095 UBIAD1Q9Y5Z9 338 aa22.2■■□□□ 1.14
HCFC1R1-204ENST00000573095 MUC3AQ02505 3323 aa22.2■■□□□ 1.14
HCFC1R1-204ENST00000573095 UTP14CQ5TAP6 766 aaKnown RBP22.19■■□□□ 1.14
HCFC1R1-204ENST00000573095 KRT40Q6A162 431 aa22.19■■□□□ 1.14
HCFC1R1-204ENST00000573095 SYNE3Q6ZMZ3 975 aa22.19■■□□□ 1.14
HCFC1R1-204ENST00000573095 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.19■■□□□ 1.14
HCFC1R1-204ENST00000573095 HEATR3Q7Z4Q2 680 aa22.19■■□□□ 1.14
HCFC1R1-204ENST00000573095 TEX2Q8IWB9 1127 aa22.19■■□□□ 1.14
HCFC1R1-204ENST00000573095 CCDC82Q8N4S0 544 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms