RNA–Protein interactions for RNA: ENST00000572845.1

TVP23B-205, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5

Gene TVP23B, Length 483 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-205ENST00000572845 R3HDM1Q15032 1099 aaKnown RBP4.85□□□□□ -1.63
TVP23B-205ENST00000572845 PRKD1Q15139 912 aaPredicted RBP4.85□□□□□ -1.63
TVP23B-205ENST00000572845 CCDC103Q8IW40 242 aa4.85□□□□□ -1.63
TVP23B-205ENST00000572845 TTLL11Q8NHH1 800 aa4.85□□□□□ -1.63
TVP23B-205ENST00000572845 Q8TCH9 128 aa4.85□□□□□ -1.63
TVP23B-205ENST00000572845 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.85□□□□□ -1.63
TVP23B-205ENST00000572845 ZCCHC14Q8WYQ9 949 aaKnown RBP4.85□□□□□ -1.63
TVP23B-205ENST00000572845 CLDND1Q9NY35 253 aa4.85□□□□□ -1.63
TVP23B-205ENST00000572845 MYOTQ9UBF9 498 aa4.85□□□□□ -1.63
TVP23B-205ENST00000572845 PCDHA2Q9Y5H9 948 aa4.85□□□□□ -1.63
TVP23B-205ENST00000572845 SHROOM4Q9ULL8 1493 aa4.85□□□□□ -1.63
TVP23B-205ENST00000572845 CYP4F3Q08477 520 aa4.84□□□□□ -1.63
TVP23B-205ENST00000572845 SV2CQ496J9 727 aa4.84□□□□□ -1.63
TVP23B-205ENST00000572845 RALYLQ86SE5 291 aaKnown RBP4.84□□□□□ -1.63
TVP23B-205ENST00000572845 METTL16Q86W50 562 aaKnown RBP4.84□□□□□ -1.63
TVP23B-205ENST00000572845 PPIL6Q8IXY8 311 aa4.84□□□□□ -1.63
TVP23B-205ENST00000572845 IFNL2Q8IZJ0 200 aa4.84□□□□□ -1.63
TVP23B-205ENST00000572845 KREMEN2Q8NCW0 462 aa4.84□□□□□ -1.63
TVP23B-205ENST00000572845 BTN2A2Q8WVV5 523 aa4.84□□□□□ -1.63
TVP23B-205ENST00000572845 WWC2-AS2Q96NR7 200 aa4.84□□□□□ -1.63
TVP23B-205ENST00000572845 KRTAP9-8Q9BYQ0 159 aa4.84□□□□□ -1.63
TVP23B-205ENST00000572845 DLL4Q9NR61 685 aa4.84□□□□□ -1.63
TVP23B-205ENST00000572845 TMEFF2Q9UIK5 374 aaPredicted RBP4.84□□□□□ -1.63
TVP23B-205ENST00000572845 ITGAVP06756 1048 aa4.83□□□□□ -1.64
TVP23B-205ENST00000572845 KCNJ6P48051 423 aa4.83□□□□□ -1.64
TVP23B-205ENST00000572845 SMAD2Q15796 467 aaKnown RBP4.83□□□□□ -1.64
TVP23B-205ENST00000572845 SPDYAQ5MJ70 313 aa4.83□□□□□ -1.64
TVP23B-205ENST00000572845 VASNQ6EMK4 673 aa4.83□□□□□ -1.64
TVP23B-205ENST00000572845 Q6ZUG5 572 aa4.83□□□□□ -1.64
TVP23B-205ENST00000572845 AJUBAQ96IF1 538 aa4.83□□□□□ -1.64
TVP23B-205ENST00000572845 ZNF341Q9BYN7 854 aa4.83□□□□□ -1.64
TVP23B-205ENST00000572845 SLC6A20Q9NP91 592 aa4.83□□□□□ -1.64
TVP23B-205ENST00000572845 SLC4A7Q9Y6M7 1214 aa4.83□□□□□ -1.64
TVP23B-205ENST00000572845 ARNTLO00327 626 aa4.82□□□□□ -1.64
TVP23B-205ENST00000572845 FBXO21O94952 628 aa4.82□□□□□ -1.64
TVP23B-205ENST00000572845 FOXE3Q13461 319 aa4.82□□□□□ -1.64
TVP23B-205ENST00000572845 CRB2Q5IJ48 1285 aa4.82□□□□□ -1.64
TVP23B-205ENST00000572845 TMC5Q6UXY8 1006 aa4.82□□□□□ -1.64
TVP23B-205ENST00000572845 ZNF227Q86WZ6 799 aa4.82□□□□□ -1.64
TVP23B-205ENST00000572845 REXO1L1PQ8IX06 675 aa4.82□□□□□ -1.64
TVP23B-205ENST00000572845 FAM169BQ8N8A8 192 aa4.82□□□□□ -1.64
TVP23B-205ENST00000572845 LMF1Q96S06 567 aa4.82□□□□□ -1.64
TVP23B-205ENST00000572845 PTPN18Q99952 460 aa4.82□□□□□ -1.64
TVP23B-205ENST00000572845 PDGFDQ9GZP0 370 aaPredicted RBP4.82□□□□□ -1.64
TVP23B-205ENST00000572845 MEGF9Q9H1U4 602 aa4.82□□□□□ -1.64
TVP23B-205ENST00000572845 ASH2LQ9UBL3 628 aa4.82□□□□□ -1.64
TVP23B-205ENST00000572845 NPFFR2Q9Y5X5 522 aa4.82□□□□□ -1.64
TVP23B-205ENST00000572845 KLHL18O94889 574 aa4.81□□□□□ -1.64
TVP23B-205ENST00000572845 CNOT4O95628 575 aaKnown RBP4.81□□□□□ -1.64
TVP23B-205ENST00000572845 GFRA1P56159 465 aa4.81□□□□□ -1.64
TVP23B-205ENST00000572845 ZNF568Q3ZCX4 644 aa4.81□□□□□ -1.64
TVP23B-205ENST00000572845 TNNI3KQ59H18 835 aa4.81□□□□□ -1.64
TVP23B-205ENST00000572845 NT5DC4Q86YG4 428 aa4.81□□□□□ -1.64
TVP23B-205ENST00000572845 DTX3Q8N9I9 347 aa4.81□□□□□ -1.64
TVP23B-205ENST00000572845 GIMAP8Q8ND71 665 aaPredicted RBP4.81□□□□□ -1.64
TVP23B-205ENST00000572845 NUDT10Q8NFP7 164 aa4.81□□□□□ -1.64
TVP23B-205ENST00000572845 EDAQ92838 391 aa4.81□□□□□ -1.64
TVP23B-205ENST00000572845 ANAPC16Q96DE5 110 aa4.81□□□□□ -1.64
TVP23B-205ENST00000572845 NUDT11Q96G61 164 aa4.81□□□□□ -1.64
TVP23B-205ENST00000572845 EPN3Q9H201 632 aa4.81□□□□□ -1.64
TVP23B-205ENST00000572845 WDR33Q9C0J8 1336 aaKnown RBP4.8□□□□□ -1.64
TVP23B-205ENST00000572845 AGRPO00253 132 aa4.8□□□□□ -1.64
TVP23B-205ENST00000572845 RECKO95980 971 aa4.8□□□□□ -1.64
TVP23B-205ENST00000572845 KNG1P01042 644 aa4.8□□□□□ -1.64
TVP23B-205ENST00000572845 ENO2P09104 434 aaPredicted RBP4.8□□□□□ -1.64
TVP23B-205ENST00000572845 COL6A1P12109 1028 aa4.8□□□□□ -1.64
TVP23B-205ENST00000572845 KLF10Q13118 480 aa4.8□□□□□ -1.64
TVP23B-205ENST00000572845 MIIPQ5JXC2 388 aa4.8□□□□□ -1.64
TVP23B-205ENST00000572845 TMCO4Q5TGY1 634 aa4.8□□□□□ -1.64
TVP23B-205ENST00000572845 RSPO2Q6UXX9 243 aaPredicted RBP4.8□□□□□ -1.64
TVP23B-205ENST00000572845 FAM178BQ8IXR5 827 aa4.8□□□□□ -1.64
TVP23B-205ENST00000572845 GPR27Q9NS67 375 aa4.8□□□□□ -1.64
TVP23B-205ENST00000572845 FBXL7Q9UJT9 491 aa4.8□□□□□ -1.64
TVP23B-205ENST00000572845 SUSD5O60279 629 aa4.79□□□□□ -1.64
TVP23B-205ENST00000572845 COMTP21964 271 aa4.79□□□□□ -1.64
TVP23B-205ENST00000572845 ABHD18Q0P651 414 aa4.79□□□□□ -1.64
TVP23B-205ENST00000572845 FHL2Q14192 279 aa4.79□□□□□ -1.64
TVP23B-205ENST00000572845 SLC35F1Q5T1Q4 408 aa4.79□□□□□ -1.64
TVP23B-205ENST00000572845 TCTN3Q6NUS6 607 aa4.79□□□□□ -1.64
TVP23B-205ENST00000572845 TMEM145Q8NBT3 493 aa4.79□□□□□ -1.64
TVP23B-205ENST00000572845 KCTD13Q8WZ19 329 aa4.79□□□□□ -1.64
TVP23B-205ENST00000572845 ADOQ96SZ5 270 aa4.79□□□□□ -1.64
TVP23B-205ENST00000572845 KATNBL1Q9H079 304 aa4.79□□□□□ -1.64
TVP23B-205ENST00000572845 ACTR10Q9NZ32 417 aa4.79□□□□□ -1.64
TVP23B-205ENST00000572845 ARHGAP20Q9P2F6 1191 aa4.79□□□□□ -1.64
TVP23B-205ENST00000572845 ZFR2Q9UPR6 939 aaKnown RBP4.79□□□□□ -1.64
TVP23B-205ENST00000572845 WASF3Q9UPY6 502 aa4.79□□□□□ -1.64
TVP23B-205ENST00000572845 INPP5FQ9Y2H2 1132 aa4.79□□□□□ -1.64
TVP23B-205ENST00000572845 NPIPB8E9PQR5 432 aa4.78□□□□□ -1.64
TVP23B-205ENST00000572845 TBX1O43435 398 aa4.78□□□□□ -1.64
TVP23B-205ENST00000572845 CKMP06732 381 aa4.78□□□□□ -1.64
TVP23B-205ENST00000572845 LCP1P13796 627 aa4.78□□□□□ -1.64
TVP23B-205ENST00000572845 FAHP16930 419 aa4.78□□□□□ -1.64
TVP23B-205ENST00000572845 CDK11BP21127 795 aaKnown RBP4.78□□□□□ -1.64
TVP23B-205ENST00000572845 MCM7P33993 719 aa4.78□□□□□ -1.64
TVP23B-205ENST00000572845 SPIRE1Q08AE8 756 aa4.78□□□□□ -1.64
TVP23B-205ENST00000572845 MAP4K2Q12851 820 aa4.78□□□□□ -1.64
TVP23B-205ENST00000572845 USP10Q14694 798 aaKnown RBP4.78□□□□□ -1.64
TVP23B-205ENST00000572845 FXNQ16595 210 aa4.78□□□□□ -1.64
TVP23B-205ENST00000572845 PRSS53Q2L4Q9 553 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms