RNA–Protein interactions for RNA: ENST00000572756.5

NDE1-205, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 5

Gene NDE1, Length 915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-205ENST00000572756 GDF6Q6KF10 455 aaPredicted RBP18.47■□□□□ 0.55
NDE1-205ENST00000572756 VWCEQ96DN2 955 aa18.47■□□□□ 0.55
NDE1-205ENST00000572756 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.47■□□□□ 0.555e-7■■□□□ 12.8
NDE1-205ENST00000572756 HDAC6Q9UBN7 1215 aa18.47■□□□□ 0.55
NDE1-205ENST00000572756 GTF2IRD1Q9UHL9 959 aa18.47■□□□□ 0.55
NDE1-205ENST00000572756 MAFGO15525 162 aa18.46■□□□□ 0.55
NDE1-205ENST00000572756 LGALS2P05162 132 aa18.46■□□□□ 0.55
NDE1-205ENST00000572756 CCL23P55773 120 aa18.46■□□□□ 0.55
NDE1-205ENST00000572756 CHMP4BP1P59074 171 aa18.46■□□□□ 0.55
NDE1-205ENST00000572756 AKAP17AQ02040 695 aaKnown RBP18.46■□□□□ 0.55
NDE1-205ENST00000572756 MTMR1Q13613 665 aa18.46■□□□□ 0.55
NDE1-205ENST00000572756 GIMAP8Q8ND71 665 aaPredicted RBP18.46■□□□□ 0.55
NDE1-205ENST00000572756 CCDC12Q8WUD4 166 aaPredicted RBP18.46■□□□□ 0.55
NDE1-205ENST00000572756 CRYGNQ8WXF5 182 aa18.46■□□□□ 0.55
NDE1-205ENST00000572756 MXRA8Q9BRK3 442 aa18.46■□□□□ 0.55
NDE1-205ENST00000572756 IL23AQ9NPF7 189 aa18.46■□□□□ 0.55
NDE1-205ENST00000572756 PITPNM1O00562 1244 aa18.45■□□□□ 0.54
NDE1-205ENST00000572756 NOP56O00567 594 aaKnown RBP18.45■□□□□ 0.54
NDE1-205ENST00000572756 PTGISQ16647 500 aa18.45■□□□□ 0.54
NDE1-205ENST00000572756 RASIP1Q5U651 963 aa18.45■□□□□ 0.54
NDE1-205ENST00000572756 C7orf31Q8N865 590 aa18.45■□□□□ 0.54
NDE1-205ENST00000572756 CYP2W1Q8TAV3 490 aa18.45■□□□□ 0.54
NDE1-205ENST00000572756 RNPC3Q96LT9 517 aaKnown RBP18.45■□□□□ 0.54
NDE1-205ENST00000572756 ALG1Q9BT22 464 aa18.45■□□□□ 0.54
NDE1-205ENST00000572756 C6orf50Q9HD87 102 aa18.45■□□□□ 0.54
NDE1-205ENST00000572756 TET1Q8NFU7 2136 aa18.44■□□□□ 0.54
NDE1-205ENST00000572756 H3BRB1 525 aa18.44■□□□□ 0.54
NDE1-205ENST00000572756 ACRP10323 421 aa18.44■□□□□ 0.54
NDE1-205ENST00000572756 GNA11P29992 359 aa18.44■□□□□ 0.54
NDE1-205ENST00000572756 HOXC8P31273 242 aa18.44■□□□□ 0.54
NDE1-205ENST00000572756 ARHGAP4P98171 946 aa18.44■□□□□ 0.54
NDE1-205ENST00000572756 SSRP1Q08945 709 aaKnown RBP18.44■□□□□ 0.54
NDE1-205ENST00000572756 RBL2Q08999 1139 aa18.44■□□□□ 0.54
NDE1-205ENST00000572756 SCRN1Q12765 414 aa18.44■□□□□ 0.54
NDE1-205ENST00000572756 STK3Q13188 491 aa18.44■□□□□ 0.54
NDE1-205ENST00000572756 HIC1Q14526 733 aa18.44■□□□□ 0.54
NDE1-205ENST00000572756 CEP55Q53EZ4 464 aa18.44■□□□□ 0.54
NDE1-205ENST00000572756 JAKMIP3Q5VZ66 844 aa18.44■□□□□ 0.54
NDE1-205ENST00000572756 MCTP2Q6DN12 878 aa18.44■□□□□ 0.54
NDE1-205ENST00000572756 PSRC1Q6PGN9 363 aaPredicted RBP18.44■□□□□ 0.54
NDE1-205ENST00000572756 ZNF365Q70YC5 407 aa18.44■□□□□ 0.54
NDE1-205ENST00000572756 REXO1Q8N1G1 1221 aaKnown RBP18.44■□□□□ 0.54
NDE1-205ENST00000572756 DHX38Q92620 1227 aaKnown RBP18.44■□□□□ 0.54
NDE1-205ENST00000572756 SCLYQ96I15 445 aa18.44■□□□□ 0.54
NDE1-205ENST00000572756 TUT1Q9H6E5 874 aaKnown RBP18.44■□□□□ 0.54
NDE1-205ENST00000572756 SH3GLB2Q9NR46 395 aa18.44■□□□□ 0.54
NDE1-205ENST00000572756 KCNH7Q9NS40 1196 aa18.44■□□□□ 0.54
NDE1-205ENST00000572756 VPS54Q9P1Q0 977 aa18.44■□□□□ 0.54
NDE1-205ENST00000572756 TPCN1Q9ULQ1 816 aa18.44■□□□□ 0.54
NDE1-205ENST00000572756 KAT6AQ92794 2004 aa18.44■□□□□ 0.54
NDE1-205ENST00000572756 MEIS1O00470 390 aa18.43■□□□□ 0.54
NDE1-205ENST00000572756 CPLX1O14810 134 aa18.43■□□□□ 0.54
NDE1-205ENST00000572756 PFKFB2O60825 505 aa18.43■□□□□ 0.54
NDE1-205ENST00000572756 CYP3A4P08684 503 aa18.43■□□□□ 0.54
NDE1-205ENST00000572756 AK2P54819 239 aa18.43■□□□□ 0.54
NDE1-205ENST00000572756 SMAD3P84022 425 aaKnown RBP18.43■□□□□ 0.54
NDE1-205ENST00000572756 C8orf34Q49A92 452 aa18.43■□□□□ 0.54
NDE1-205ENST00000572756 NIPA1Q7RTP0 329 aa18.43■□□□□ 0.54
NDE1-205ENST00000572756 TRIM22Q8IYM9 498 aa18.43■□□□□ 0.54
NDE1-205ENST00000572756 CCDC148Q8NFR7 591 aa18.43■□□□□ 0.54
NDE1-205ENST00000572756 NOD1Q9Y239 953 aa18.43■□□□□ 0.54
NDE1-205ENST00000572756 GSTTP1A0A1W2PQM5 241 aa18.42■□□□□ 0.54
NDE1-205ENST00000572756 DEXIO95424 95 aa18.42■□□□□ 0.54
NDE1-205ENST00000572756 IQCF3P0C7M6 154 aa18.42■□□□□ 0.54
NDE1-205ENST00000572756 ARP10275 920 aa18.42■□□□□ 0.54
NDE1-205ENST00000572756 ZNF200P98182 395 aaPredicted RBP18.42■□□□□ 0.54
NDE1-205ENST00000572756 SP4Q02446 784 aa18.42■□□□□ 0.54
NDE1-205ENST00000572756 BFSP2Q13515 415 aa18.42■□□□□ 0.54
NDE1-205ENST00000572756 ANKRD1Q15327 319 aa18.42■□□□□ 0.54
NDE1-205ENST00000572756 TRIM50Q86XT4 487 aa18.42■□□□□ 0.54
NDE1-205ENST00000572756 CAGE1Q8TC20 777 aa18.42■□□□□ 0.54
NDE1-205ENST00000572756 BICD2Q8TD16 824 aa18.42■□□□□ 0.54
NDE1-205ENST00000572756 HERVK_113Q902F9 699 aa18.42■□□□□ 0.54
NDE1-205ENST00000572756 PKD2L1Q9P0L9 805 aa18.42■□□□□ 0.54
NDE1-205ENST00000572756 NFASCO94856 1347 aa18.42■□□□□ 0.54
NDE1-205ENST00000572756 IGLV3-22A0A075B6J6 115 aa18.41■□□□□ 0.54
NDE1-205ENST00000572756 FAM86B1E9PN63 330 aa18.41■□□□□ 0.54
NDE1-205ENST00000572756 FAM86B2P0C5J1 330 aa18.41■□□□□ 0.54
NDE1-205ENST00000572756 SMIM10L2AP0DMW4 78 aa18.41■□□□□ 0.54
NDE1-205ENST00000572756 SMIM10L2BP0DMW5 78 aa18.41■□□□□ 0.54
NDE1-205ENST00000572756 TCF7P36402 384 aaPredicted RBP18.41■□□□□ 0.54
NDE1-205ENST00000572756 PTK7Q13308 1070 aa18.41■□□□□ 0.54
NDE1-205ENST00000572756 ITGB3BPQ13352 177 aaPredicted RBP18.41■□□□□ 0.54
NDE1-205ENST00000572756 TRIM71Q2Q1W2 868 aaKnown RBP18.41■□□□□ 0.54
NDE1-205ENST00000572756 FAM109BQ6ICB4 259 aaPredicted RBP18.41■□□□□ 0.54
NDE1-205ENST00000572756 CPLX2Q6PUV4 134 aaKnown RBP18.41■□□□□ 0.54
NDE1-205ENST00000572756 RASGRP4Q8TDF6 673 aa18.41■□□□□ 0.54
NDE1-205ENST00000572756 SEPT1Q8WYJ6 367 aa18.41■□□□□ 0.54
NDE1-205ENST00000572756 WNT8BQ93098 351 aa18.41■□□□□ 0.54
NDE1-205ENST00000572756 SLKQ9H2G2 1235 aaPredicted RBP18.41■□□□□ 0.54
NDE1-205ENST00000572756 AGO4Q9HCK5 861 aaKnown RBP18.41■□□□□ 0.54
NDE1-205ENST00000572756 PFKMP08237 780 aa18.4■□□□□ 0.54
NDE1-205ENST00000572756 RFC2P35250 354 aa18.4■□□□□ 0.54
NDE1-205ENST00000572756 NPY5RQ15761 445 aa18.4■□□□□ 0.54
NDE1-205ENST00000572756 UTP14CQ5TAP6 766 aaKnown RBP18.4■□□□□ 0.54
NDE1-205ENST00000572756 Q7L0L9 218 aa18.4■□□□□ 0.54
NDE1-205ENST00000572756 RPUSD2Q8IZ73 545 aaKnown RBP18.4■□□□□ 0.54
NDE1-205ENST00000572756 FAM177A1Q8N128 213 aaPredicted RBP18.4■□□□□ 0.54
NDE1-205ENST00000572756 CCDC155Q8N6L0 562 aa18.4■□□□□ 0.54
NDE1-205ENST00000572756 RETREG2Q8NC44 543 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms