RNA–Protein interactions for RNA: ENST00000572525.5

CHMP6-203, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-203ENST00000572525 EIF3JO75822 258 aaKnown RBP11.89□□□□□ -0.51
CHMP6-203ENST00000572525 PDHBP11177 359 aa11.89□□□□□ -0.51
CHMP6-203ENST00000572525 ATF7P17544 494 aaPredicted RBP11.89□□□□□ -0.51
CHMP6-203ENST00000572525 AVPR2P30518 371 aa11.89□□□□□ -0.51
CHMP6-203ENST00000572525 CTNNB1P35222 781 aa11.89□□□□□ -0.51
CHMP6-203ENST00000572525 NBL1P41271 181 aa11.89□□□□□ -0.51
CHMP6-203ENST00000572525 DHX37Q8IY37 1157 aaKnown RBP11.89□□□□□ -0.51
CHMP6-203ENST00000572525 EFHBQ8N7U6 833 aa11.89□□□□□ -0.51
CHMP6-203ENST00000572525 ALG1Q9BT22 464 aa11.89□□□□□ -0.51
CHMP6-203ENST00000572525 DDX19BQ9UMR2 479 aa11.89□□□□□ -0.51
CHMP6-203ENST00000572525 ABCB11O95342 1321 aa11.88□□□□□ -0.51
CHMP6-203ENST00000572525 LAMA4Q16363 1823 aa11.88□□□□□ -0.51
CHMP6-203ENST00000572525 GRM6O15303 877 aa11.88□□□□□ -0.51
CHMP6-203ENST00000572525 NMT2O60551 498 aa11.88□□□□□ -0.51
CHMP6-203ENST00000572525 ICAM3P32942 547 aa11.88□□□□□ -0.51
CHMP6-203ENST00000572525 THPOP40225 353 aa11.88□□□□□ -0.51
CHMP6-203ENST00000572525 GHRHRQ02643 423 aa11.88□□□□□ -0.51
CHMP6-203ENST00000572525 ZNF543Q08ER8 600 aa11.88□□□□□ -0.51
CHMP6-203ENST00000572525 FAM26DQ5JW98 314 aa11.88□□□□□ -0.51
CHMP6-203ENST00000572525 GPATCH4Q5T3I0 446 aaKnown RBP11.88□□□□□ -0.51
CHMP6-203ENST00000572525 SEPT14Q6ZU15 432 aa11.88□□□□□ -0.51
CHMP6-203ENST00000572525 ATOH1Q92858 354 aaPredicted RBP11.88□□□□□ -0.51
CHMP6-203ENST00000572525 TTC14Q96N46 770 aa11.88□□□□□ -0.51
CHMP6-203ENST00000572525 FSD1Q9BTV5 496 aa11.88□□□□□ -0.51
CHMP6-203ENST00000572525 PHF7Q9BWX1 381 aaPredicted RBP11.88□□□□□ -0.51
CHMP6-203ENST00000572525 FANCMQ8IYD8 2048 aa11.87□□□□□ -0.51
CHMP6-203ENST00000572525 C17orf102A2RUQ5 167 aa11.87□□□□□ -0.51
CHMP6-203ENST00000572525 PRR23AA6NEV1 266 aa11.87□□□□□ -0.51
CHMP6-203ENST00000572525 GALR2O43603 387 aaPredicted RBP11.87□□□□□ -0.51
CHMP6-203ENST00000572525 ZNF286BP0CG31 522 aa11.87□□□□□ -0.51
CHMP6-203ENST00000572525 TGFB3P10600 412 aa11.87□□□□□ -0.51
CHMP6-203ENST00000572525 NDUFV1P49821 464 aa11.87□□□□□ -0.51
CHMP6-203ENST00000572525 VCPP55072 806 aaKnown RBP11.87□□□□□ -0.51
CHMP6-203ENST00000572525 RRP1P56182 461 aaKnown RBP11.87□□□□□ -0.51
CHMP6-203ENST00000572525 HIC1Q14526 733 aa11.87□□□□□ -0.51
CHMP6-203ENST00000572525 CLUL1Q15846 466 aa11.87□□□□□ -0.51
CHMP6-203ENST00000572525 MYSM1Q5VVJ2 828 aa11.87□□□□□ -0.51
CHMP6-203ENST00000572525 CHST3Q7LGC8 479 aa11.87□□□□□ -0.51
CHMP6-203ENST00000572525 MCF2L2Q86YR7 1114 aa11.87□□□□□ -0.51
CHMP6-203ENST00000572525 SYTL5Q8TDW5 730 aaPredicted RBP11.87□□□□□ -0.51
CHMP6-203ENST00000572525 ATP6V0A1Q93050 837 aa11.87□□□□□ -0.51
CHMP6-203ENST00000572525 ZNF689Q96CS4 500 aaPredicted RBP11.87□□□□□ -0.51
CHMP6-203ENST00000572525 RMDN3Q96TC7 470 aa11.87□□□□□ -0.51
CHMP6-203ENST00000572525 TMEM47Q9BQJ4 181 aa11.87□□□□□ -0.51
CHMP6-203ENST00000572525 MAP3K20Q9NYL2 800 aaKnown RBP11.87□□□□□ -0.51
CHMP6-203ENST00000572525 MRVI1Q9Y6F6 885 aa11.87□□□□□ -0.51
CHMP6-203ENST00000572525 NCOR2Q9Y618 2525 aa11.87□□□□□ -0.51
CHMP6-203ENST00000572525 ACACBO00763 2458 aa11.86□□□□□ -0.51
CHMP6-203ENST00000572525 RANBP6O60518 1105 aaKnown RBP11.86□□□□□ -0.51
CHMP6-203ENST00000572525 UPP2O95045 317 aa11.86□□□□□ -0.51
CHMP6-203ENST00000572525 GNAT1P11488 350 aa11.86□□□□□ -0.51
CHMP6-203ENST00000572525 PCP11498 1178 aaKnown RBP11.86□□□□□ -0.51
CHMP6-203ENST00000572525 NT5C2P49902 561 aa11.86□□□□□ -0.51
CHMP6-203ENST00000572525 ZNF200P98182 395 aaPredicted RBP11.86□□□□□ -0.51
CHMP6-203ENST00000572525 CAMK1Q14012 370 aa11.86□□□□□ -0.51
CHMP6-203ENST00000572525 ALX1Q15699 326 aa11.86□□□□□ -0.51
CHMP6-203ENST00000572525 ZMYM1Q5SVZ6 1142 aa11.86□□□□□ -0.51
CHMP6-203ENST00000572525 FAM43BQ6ZT52 329 aaPredicted RBP11.86□□□□□ -0.51
CHMP6-203ENST00000572525 PANK1Q8TE04 598 aa11.86□□□□□ -0.51
CHMP6-203ENST00000572525 C16orf70Q9BSU1 422 aa11.86□□□□□ -0.51
CHMP6-203ENST00000572525 FAM86C1Q9NVL1 165 aa11.86□□□□□ -0.51
CHMP6-203ENST00000572525 CLEC1BQ9P126 229 aa11.86□□□□□ -0.51
CHMP6-203ENST00000572525 FOXP2O15409 715 aa11.85□□□□□ -0.51
CHMP6-203ENST00000572525 LINC01565O15544 149 aa11.85□□□□□ -0.51
CHMP6-203ENST00000572525 NR3C2P08235 984 aa11.85□□□□□ -0.51
CHMP6-203ENST00000572525 PTPN21Q16825 1174 aa11.85□□□□□ -0.51
CHMP6-203ENST00000572525 CELF3Q5SZQ8 465 aaKnown RBP11.85□□□□□ -0.51
CHMP6-203ENST00000572525 MCTP2Q6DN12 878 aa11.85□□□□□ -0.51
CHMP6-203ENST00000572525 SAMD3Q8N6K7 520 aa11.85□□□□□ -0.51
CHMP6-203ENST00000572525 SUSD6Q92537 303 aa11.85□□□□□ -0.51
CHMP6-203ENST00000572525 CHMP4CQ96CF2 233 aa11.85□□□□□ -0.51
CHMP6-203ENST00000572525 TAAR1Q96RJ0 339 aa11.85□□□□□ -0.51
CHMP6-203ENST00000572525 GPCPD1Q9NPB8 672 aa11.85□□□□□ -0.51
CHMP6-203ENST00000572525 COL20A1Q9P218 1284 aa11.85□□□□□ -0.51
CHMP6-203ENST00000572525 PLAGL2Q9UPG8 496 aa11.85□□□□□ -0.51
CHMP6-203ENST00000572525 ZMYM6O95789 1325 aa11.85□□□□□ -0.51
CHMP6-203ENST00000572525 FRMPD2Q68DX3 1309 aaPredicted RBP11.85□□□□□ -0.51
CHMP6-203ENST00000572525 TTC41PQ6P2S7 1318 aa11.85□□□□□ -0.51
CHMP6-203ENST00000572525 OTOGLQ3ZCN5 2332 aa11.85□□□□□ -0.51
CHMP6-203ENST00000572525 H3BRB1 525 aa11.84□□□□□ -0.51
CHMP6-203ENST00000572525 GTF2F1P35269 517 aaKnown RBP eCLIP11.84□□□□□ -0.51
CHMP6-203ENST00000572525 ADAM17P78536 824 aa11.84□□□□□ -0.51
CHMP6-203ENST00000572525 CTDSPL2Q05D32 466 aa11.84□□□□□ -0.51
CHMP6-203ENST00000572525 HSDL1Q3SXM5 330 aa11.84□□□□□ -0.51
CHMP6-203ENST00000572525 ARHGEF16Q5VV41 709 aa11.84□□□□□ -0.51
CHMP6-203ENST00000572525 ASCL5Q7RTU5 278 aa11.84□□□□□ -0.51
CHMP6-203ENST00000572525 CMTR2Q8IYT2 770 aaKnown RBP11.84□□□□□ -0.51
CHMP6-203ENST00000572525 RIPOR3Q96MK2 946 aa11.84□□□□□ -0.51
CHMP6-203ENST00000572525 SPATA33Q96N06 139 aa11.84□□□□□ -0.51
CHMP6-203ENST00000572525 TUT1Q9H6E5 874 aaKnown RBP11.84□□□□□ -0.51
CHMP6-203ENST00000572525 EHMT1Q9H9B1 1298 aa11.84□□□□□ -0.51
CHMP6-203ENST00000572525 PXMP2Q9NR77 195 aa11.84□□□□□ -0.51
CHMP6-203ENST00000572525 TRPC6Q9Y210 931 aa11.84□□□□□ -0.51
CHMP6-203ENST00000572525 MTMR7Q9Y216 660 aa11.84□□□□□ -0.51
CHMP6-203ENST00000572525 USP15Q9Y4E8 981 aaPredicted RBP11.84□□□□□ -0.51
CHMP6-203ENST00000572525 CCDC171Q6TFL3 1326 aa11.84□□□□□ -0.51
CHMP6-203ENST00000572525 TREHO43280 583 aa11.83□□□□□ -0.52
CHMP6-203ENST00000572525 DGKIO75912 1065 aa11.83□□□□□ -0.52
CHMP6-203ENST00000572525 RGS20O76081 388 aa11.83□□□□□ -0.52
CHMP6-203ENST00000572525 GLP2RO95838 553 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms